Wall clock time and date at job start Tue Mar 9 2021 12:59:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46878 * 2 1 4 4 C 1.50693 * 109.47423 * 120.00014 * 2 1 3 5 5 C 1.36454 * 120.29695 * 120.01990 * 4 2 1 6 6 C 1.40088 * 119.25730 * 179.73378 * 5 4 2 7 7 C 1.40852 * 132.86605 * 179.61390 * 6 5 4 8 8 C 1.46564 * 126.57842 * 0.67314 * 7 6 5 9 9 O 1.21723 * 120.00101 * 359.71246 * 8 7 6 10 10 N 1.34777 * 119.99718 * 179.70922 * 8 7 6 11 11 C 1.46499 * 119.99665 * 179.72448 * 10 8 7 12 12 C 1.53004 * 109.47198 * 180.27868 * 11 10 8 13 13 H 1.08998 * 109.46700 * 305.00136 * 12 11 10 14 14 C 1.53004 * 109.47137 * 65.00035 * 12 11 10 15 15 C 1.52996 * 109.47242 * 180.02562 * 14 12 11 16 16 C 1.53006 * 109.46976 * 299.99985 * 15 14 12 17 17 H 1.08997 * 109.46851 * 299.99936 * 16 15 14 18 18 C 1.52996 * 109.46976 * 179.97438 * 16 15 14 19 19 O 1.42896 * 109.47503 * 64.99798 * 18 16 15 20 20 C 1.53004 * 109.47123 * 59.99942 * 16 15 14 21 21 C 1.52998 * 109.47023 * 185.00121 * 12 11 10 22 22 C 1.40562 * 106.84092 * 180.40919 * 7 6 5 23 23 N 1.30742 * 108.74235 * 0.24403 * 22 7 6 24 24 N 1.36589 * 120.22634 * 0.49973 * 6 5 4 25 25 C 1.36238 * 120.07803 * 359.47847 * 24 6 5 26 26 C 1.35188 * 120.71171 * 0.29549 * 25 24 6 27 27 H 0.96690 * 113.99964 * 299.99784 * 1 2 3 28 28 H 1.08998 * 109.47244 * 240.00340 * 2 1 3 29 29 H 1.48497 * 110.00030 * 178.68035 * 3 2 1 30 30 H 1.48506 * 110.00273 * 300.00170 * 3 2 1 31 31 H 1.07995 * 120.36866 * 0.02562 * 5 4 2 32 32 H 0.97001 * 120.00485 * 0.02562 * 10 8 7 33 33 H 1.09009 * 109.47454 * 300.27637 * 11 10 8 34 34 H 1.08998 * 109.47492 * 60.27932 * 11 10 8 35 35 H 1.09000 * 109.46939 * 300.00085 * 14 12 11 36 36 H 1.09003 * 109.46857 * 59.99834 * 14 12 11 37 37 H 1.08991 * 109.47151 * 179.97438 * 15 14 12 38 38 H 1.08997 * 109.47278 * 59.99660 * 15 14 12 39 39 H 1.09002 * 109.47209 * 185.00347 * 18 16 15 40 40 H 1.09000 * 109.47272 * 304.99602 * 18 16 15 41 41 H 0.96694 * 114.00334 * 179.97438 * 19 18 16 42 42 H 1.09000 * 109.46939 * 180.02562 * 20 16 15 43 43 H 1.09004 * 109.46838 * 59.99735 * 20 16 15 44 44 H 1.09005 * 109.47209 * 299.99293 * 21 12 11 45 45 H 1.08991 * 109.47437 * 59.99960 * 21 12 11 46 46 H 1.07997 * 125.62855 * 180.21485 * 22 7 6 47 47 H 1.08001 * 119.64255 * 180.27204 * 25 24 6 48 48 H 1.07995 * 119.83909 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.7166 -1.8201 1.1122 6 6 3.1762 -2.4601 2.2705 7 6 3.9761 -3.6000 2.4821 8 6 4.5769 -4.4493 1.4497 9 8 4.3974 -4.1960 0.2728 10 7 5.3283 -5.5107 1.8036 11 6 5.9239 -6.3631 0.7717 12 6 6.7156 -7.4912 1.4364 13 1 7.4466 -7.0657 2.1239 14 6 5.7575 -8.4002 2.2089 15 6 6.5492 -9.5278 2.8741 16 6 7.2733 -10.3441 1.8015 17 1 6.5426 -10.7698 1.1139 18 6 8.0656 -11.4713 2.4667 19 8 7.1614 -12.3850 3.0910 20 6 8.2314 -9.4351 1.0290 21 6 7.4392 -8.3072 0.3634 22 6 4.0926 -3.7632 3.8733 23 7 3.4195 -2.8116 4.4657 24 7 2.8319 -1.9822 3.5028 25 6 2.0477 -0.8733 3.6105 26 6 1.5965 -0.2369 2.5064 27 1 -0.3933 0.4416 0.7650 28 1 1.7924 -0.5138 -0.8900 29 1 3.5345 1.7704 0.0321 30 1 1.5614 2.4680 -1.2085 31 1 2.9846 -2.1979 0.1366 32 1 5.4712 -5.7128 2.7415 33 1 5.1347 -6.7893 0.1523 34 1 6.5923 -5.7678 0.1498 35 1 5.2420 -7.8187 2.9733 36 1 5.0265 -8.8255 1.5213 37 1 5.8668 -10.1750 3.4248 38 1 7.2800 -9.1021 3.5617 39 1 8.6513 -11.9976 1.7130 40 1 8.7341 -11.0512 3.2182 41 1 7.5953 -13.1272 3.5334 42 1 8.7469 -10.0165 0.2646 43 1 8.9622 -9.0093 1.7167 44 1 6.7082 -8.7328 -0.3241 45 1 8.1217 -7.6598 -0.1869 46 1 4.6462 -4.5457 4.3708 47 1 1.7834 -0.4989 4.5884 48 1 0.9754 0.6407 2.6081 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_11618758.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:00 Heat of formation + Delta-G solvation = -32.066944 kcal Electronic energy + Delta-G solvation = -29791.265665 eV Core-core repulsion = 25620.621174 eV Total energy + Delta-G solvation = -4170.644491 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.173 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -43.28460 -40.68069 -39.79525 -39.27240 -37.60546 -37.26039 -35.62351 -34.21080 -32.81923 -32.08501 -31.77085 -30.41665 -28.21697 -27.10543 -25.25660 -24.60917 -23.89068 -23.31641 -22.93170 -21.67711 -21.18260 -20.71653 -19.06259 -18.56610 -18.24551 -17.91480 -17.54507 -16.96841 -16.75990 -16.53001 -16.46810 -15.97486 -15.84359 -15.78177 -15.44611 -15.10599 -14.99054 -14.81664 -14.63525 -14.42902 -14.22122 -14.02718 -13.89404 -13.55801 -13.42094 -13.18027 -13.15204 -12.84592 -12.54517 -12.40120 -12.16790 -12.11986 -11.95365 -11.93198 -11.50899 -11.46545 -11.20705 -11.11227 -10.84739 -10.81323 -10.72011 -10.32599 -9.95631 -8.75671 -5.18627 -0.55538 -0.14597 1.00903 1.08236 1.13228 1.57404 1.87369 2.06995 2.32634 2.64085 3.06786 3.17649 3.18571 3.33994 3.44823 3.58473 3.65209 3.67602 3.72526 3.85275 3.98333 4.03811 4.11429 4.16246 4.23325 4.24037 4.36137 4.39581 4.43076 4.45956 4.50215 4.52025 4.59517 4.64974 4.71887 4.75700 4.86447 4.91846 5.02395 5.07474 5.10361 5.15006 5.15708 5.19791 5.25238 5.27679 5.40411 5.47892 5.58337 5.64690 6.31670 6.37874 6.65336 6.66812 7.43952 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.069 4.069 3 Si 0.699 3.301 4 C -0.069 4.069 5 C -0.096 4.096 6 C 0.169 3.831 7 C -0.316 4.316 8 C 0.600 3.400 9 O -0.551 6.551 10 N -0.728 5.728 11 C 0.127 3.873 12 C -0.100 4.100 13 H 0.078 0.922 14 C -0.116 4.116 15 C -0.110 4.110 16 C -0.089 4.089 17 H 0.078 0.922 18 C 0.078 3.922 19 O -0.574 6.574 20 C -0.112 4.112 21 C -0.110 4.110 22 C 0.120 3.880 23 N -0.313 5.313 24 N -0.267 5.267 25 C 0.122 3.878 26 C -0.157 4.157 27 H 0.378 0.622 28 H 0.123 0.877 29 H -0.255 1.255 30 H -0.247 1.247 31 H 0.161 0.839 32 H 0.398 0.602 33 H 0.069 0.931 34 H 0.068 0.932 35 H 0.062 0.938 36 H 0.066 0.934 37 H 0.071 0.929 38 H 0.060 0.940 39 H 0.045 0.955 40 H 0.045 0.955 41 H 0.380 0.620 42 H 0.066 0.934 43 H 0.065 0.935 44 H 0.068 0.932 45 H 0.069 0.931 46 H 0.198 0.802 47 H 0.179 0.821 48 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.175 1.651 4.127 4.597 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.178 4.178 3 Si 0.598 3.402 4 C -0.074 4.074 5 C -0.115 4.115 6 C 0.048 3.952 7 C -0.330 4.330 8 C 0.389 3.611 9 O -0.430 6.430 10 N -0.379 5.379 11 C 0.003 3.997 12 C -0.118 4.118 13 H 0.096 0.904 14 C -0.153 4.153 15 C -0.147 4.147 16 C -0.107 4.107 17 H 0.096 0.904 18 C 0.000 4.000 19 O -0.379 6.379 20 C -0.150 4.150 21 C -0.148 4.148 22 C -0.061 4.061 23 N -0.133 5.133 24 N -0.031 5.031 25 C -0.004 4.004 26 C -0.178 4.178 27 H 0.226 0.774 28 H 0.140 0.860 29 H -0.179 1.179 30 H -0.171 1.171 31 H 0.178 0.822 32 H 0.232 0.768 33 H 0.087 0.913 34 H 0.087 0.913 35 H 0.081 0.919 36 H 0.085 0.915 37 H 0.089 0.911 38 H 0.079 0.921 39 H 0.063 0.937 40 H 0.063 0.937 41 H 0.227 0.773 42 H 0.085 0.915 43 H 0.084 0.916 44 H 0.087 0.913 45 H 0.087 0.913 46 H 0.215 0.785 47 H 0.197 0.803 48 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 0.899 2.933 3.284 4.494 hybrid contribution 0.947 -1.584 -0.085 1.848 sum 1.847 1.349 3.200 3.933 Atomic orbital electron populations 1.86608 1.16326 1.81662 1.49080 1.25168 0.85584 1.10329 0.96738 0.95014 0.81471 0.75972 0.87742 1.20502 0.96049 0.94960 0.95923 1.20708 0.98192 0.94521 0.98121 1.19266 0.95619 0.94126 0.86195 1.19644 1.16272 1.03517 0.93604 1.16826 0.77497 0.79549 0.87274 1.90787 1.61603 1.71994 1.18605 1.45698 1.53069 1.28976 1.10192 1.21400 0.97052 0.90928 0.90311 1.21443 0.97540 0.94925 0.97935 0.90375 1.21629 0.97718 0.96544 0.99430 1.21515 0.99300 0.96626 0.97305 1.21175 0.97845 0.94243 0.97453 0.90377 1.22246 0.91484 0.90554 0.95675 1.86473 1.36999 1.39904 1.74536 1.21513 0.97623 0.96495 0.99355 1.21476 0.99259 0.96811 0.97258 1.24057 0.94357 0.95739 0.91956 1.77632 1.18495 1.06444 1.10708 1.46096 1.32112 1.19127 1.05762 1.21596 0.91846 0.85063 1.01922 1.20715 1.04208 1.02688 0.90226 0.77419 0.85996 1.17878 1.17067 0.82161 0.76795 0.91290 0.91337 0.91913 0.91533 0.91076 0.92141 0.93701 0.93696 0.77328 0.91506 0.91628 0.91334 0.91267 0.78542 0.80350 0.81577 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.48 12.88 -35.23 -0.45 0.03 16 2 C -0.07 0.08 2.84 36.00 0.10 0.18 16 3 Si 0.70 -1.48 31.96 -169.99 -5.43 -6.91 16 4 C -0.07 0.03 4.53 -104.55 -0.47 -0.44 16 5 C -0.10 -0.23 9.35 -39.53 -0.37 -0.60 16 6 C 0.17 0.56 6.76 -84.06 -0.57 0.00 16 7 C -0.32 -0.98 6.17 -104.68 -0.65 -1.63 16 8 C 0.60 2.32 7.78 -12.90 -0.10 2.22 16 9 O -0.55 -4.01 15.71 5.17 0.08 -3.93 16 10 N -0.73 -0.39 5.27 -61.65 -0.33 -0.72 16 11 C 0.13 0.04 5.06 -4.04 -0.02 0.02 16 12 C -0.10 0.16 2.22 -90.62 -0.20 -0.04 16 13 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 14 C -0.12 0.14 5.08 -26.73 -0.14 0.00 16 15 C -0.11 0.07 5.10 -26.73 -0.14 -0.07 16 16 C -0.09 0.05 2.43 -90.62 -0.22 -0.17 16 17 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 18 C 0.08 -0.05 6.43 37.16 0.24 0.19 16 19 O -0.57 -0.38 13.20 -35.23 -0.46 -0.85 16 20 C -0.11 0.18 5.20 -26.70 -0.14 0.04 16 21 C -0.11 0.17 5.21 -26.71 -0.14 0.03 16 22 C 0.12 0.13 11.44 -17.14 -0.20 -0.06 16 23 N -0.31 -0.86 12.57 30.75 0.39 -0.47 16 24 N -0.27 -0.56 3.86 -10.54 -0.04 -0.60 16 25 C 0.12 -0.19 11.17 -16.68 -0.19 -0.37 16 26 C -0.16 0.49 8.38 -39.95 -0.33 0.16 16 27 H 0.38 -2.14 8.08 45.56 0.37 -1.78 16 28 H 0.12 -0.03 7.71 -51.93 -0.40 -0.43 16 29 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 30 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 31 H 0.16 0.52 7.01 -52.49 -0.37 0.15 16 32 H 0.40 -0.84 6.57 -40.82 -0.27 -1.11 16 33 H 0.07 0.11 8.14 -51.92 -0.42 -0.32 16 34 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 35 H 0.06 -0.11 7.18 -51.93 -0.37 -0.48 16 36 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 37 H 0.07 0.06 7.82 -51.93 -0.41 -0.34 16 38 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 41 H 0.38 -1.28 9.12 45.56 0.42 -0.86 16 42 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 43 H 0.06 -0.12 8.14 -51.93 -0.42 -0.54 16 44 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 45 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 46 H 0.20 -0.61 7.46 -52.49 -0.39 -1.00 16 47 H 0.18 -0.83 8.06 -52.49 -0.42 -1.25 16 48 H 0.17 -1.29 7.31 -52.49 -0.38 -1.68 16 LS Contribution 388.84 15.07 5.86 5.86 Total: 0.00 -11.89 388.84 -10.42 -22.30 By element: Atomic # 1 Polarization: -7.65 SS G_CDS: -6.50 Total: -14.15 kcal Atomic # 6 Polarization: 2.97 SS G_CDS: -3.53 Total: -0.55 kcal Atomic # 7 Polarization: -1.81 SS G_CDS: 0.02 Total: -1.79 kcal Atomic # 8 Polarization: -3.91 SS G_CDS: -0.84 Total: -4.75 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.43 Total: -6.91 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -11.89 -10.42 -22.30 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_11618758.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.762 kcal (2) G-P(sol) polarization free energy of solvation -11.889 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.651 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.416 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.305 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.067 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds