Wall clock time and date at job start Tue Mar 9 2021 12:59:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.35456 * 125.56667 * 2 1 4 4 C 1.50704 * 126.06433 * 0.05549 * 3 2 1 5 5 O 1.42901 * 109.46697 * 209.97464 * 4 3 2 6 6 Si 1.86297 * 109.46908 * 329.97093 * 4 3 2 7 7 C 1.39833 * 107.86987 * 180.02562 * 3 2 1 8 8 C 1.50701 * 126.46222 * 180.02562 * 7 3 2 9 9 C 1.37874 * 107.08165 * 0.02562 * 7 3 2 10 10 C 1.46677 * 126.23291 * 179.97438 * 9 7 3 11 11 O 1.21702 * 120.00152 * 359.97438 * 10 9 7 12 12 N 1.34772 * 120.00124 * 180.02562 * 10 9 7 13 13 C 1.46507 * 120.00342 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47321 * 179.97438 * 13 12 10 15 15 H 1.08992 * 109.47280 * 305.00162 * 14 13 12 16 16 C 1.53002 * 109.46978 * 65.00089 * 14 13 12 17 17 C 1.52997 * 109.46978 * 180.02562 * 16 14 13 18 18 C 1.53006 * 109.47164 * 299.99874 * 17 16 14 19 19 H 1.08998 * 109.46505 * 299.99708 * 18 17 16 20 20 C 1.52992 * 109.47223 * 180.02562 * 18 17 16 21 21 O 1.42905 * 109.47641 * 64.99686 * 20 18 17 22 22 C 1.52997 * 109.47127 * 59.99836 * 18 17 16 23 23 C 1.52996 * 109.46975 * 184.99627 * 14 13 12 24 24 N 1.35541 * 125.56686 * 180.30972 * 2 1 3 25 25 H 1.09000 * 109.46957 * 89.99714 * 1 2 3 26 26 H 1.08998 * 109.47095 * 209.99899 * 1 2 3 27 27 H 1.09004 * 109.47212 * 330.00364 * 1 2 3 28 28 H 1.08995 * 109.47077 * 89.97477 * 4 3 2 29 29 H 0.96704 * 114.00254 * 60.00470 * 5 4 3 30 30 H 1.48507 * 109.99958 * 180.02562 * 6 4 3 31 31 H 1.48498 * 110.00551 * 301.32280 * 6 4 3 32 32 H 1.08994 * 109.46585 * 269.98732 * 8 7 3 33 33 H 1.09002 * 109.46775 * 29.98346 * 8 7 3 34 34 H 1.08995 * 109.47241 * 149.98063 * 8 7 3 35 35 H 0.97003 * 120.00351 * 359.97438 * 12 10 9 36 36 H 1.08994 * 109.46961 * 59.99195 * 13 12 10 37 37 H 1.09000 * 109.46503 * 299.99769 * 13 12 10 38 38 H 1.09002 * 109.47097 * 299.99801 * 16 14 13 39 39 H 1.09001 * 109.47142 * 59.99766 * 16 14 13 40 40 H 1.09001 * 109.47375 * 59.99908 * 17 16 14 41 41 H 1.09000 * 109.47140 * 179.97438 * 17 16 14 42 42 H 1.09001 * 109.47563 * 185.00049 * 20 18 17 43 43 H 1.09004 * 109.47313 * 304.99704 * 20 18 17 44 44 H 0.96695 * 114.00050 * 180.02562 * 21 20 18 45 45 H 1.09002 * 109.47153 * 180.02562 * 22 18 17 46 46 H 1.09001 * 109.46832 * 60.00321 * 22 18 17 47 47 H 1.09004 * 109.47368 * 60.00217 * 23 14 13 48 48 H 1.09001 * 109.47372 * 300.00372 * 23 14 13 49 49 H 0.97000 * 125.67001 * 359.97438 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8199 2.5321 0.0012 5 8 2.7769 3.3523 -0.6723 6 14 0.1803 2.6427 -0.8765 7 6 3.6270 0.6768 -0.0006 8 6 4.8486 1.5592 -0.0003 9 6 3.6122 -0.7019 -0.0015 10 6 4.7859 -1.5815 -0.0029 11 8 5.9050 -1.1030 -0.0038 12 7 4.6253 -2.9196 -0.0043 13 6 5.7976 -3.7982 -0.0062 14 6 5.3407 -5.2584 -0.0068 15 1 4.6706 -5.4297 0.8355 16 6 4.6051 -5.5620 -1.3136 17 6 4.1476 -7.0220 -1.3139 18 6 5.3666 -7.9385 -1.1899 19 1 6.0367 -7.7675 -2.0324 20 6 4.9092 -9.3984 -1.1909 21 8 4.3259 -9.7142 -2.4567 22 6 6.1022 -7.6348 0.1168 23 6 6.5599 -6.1743 0.1168 24 7 2.2953 -1.1025 -0.0060 25 1 -0.3633 0.0001 -1.0277 26 1 -0.3633 -0.8900 0.5138 27 1 -0.3634 0.8900 0.5138 28 1 1.7058 2.8762 1.0291 29 1 2.9293 3.1030 -1.5941 30 1 -0.2986 4.0484 -0.8827 31 1 0.3153 2.1464 -2.2695 32 1 5.1430 1.7724 -1.0278 33 1 4.6220 2.4932 0.5140 34 1 5.6643 1.0503 0.5133 35 1 3.7334 -3.3011 -0.0039 36 1 6.3973 -3.6058 0.8833 37 1 6.3957 -3.6039 -0.8966 38 1 3.7365 -4.9095 -1.4017 39 1 5.2752 -5.3906 -2.1560 40 1 3.4774 -7.1929 -0.4715 41 1 3.6232 -7.2382 -2.2447 42 1 5.7664 -10.0479 -1.0137 43 1 4.1708 -9.5484 -0.4032 44 1 4.0124 -10.6260 -2.5288 45 1 6.9708 -8.2874 0.2049 46 1 5.4319 -7.8057 0.9592 47 1 7.0841 -5.9580 1.0477 48 1 7.2301 -6.0029 -0.7257 49 1 1.9833 -2.0210 -0.0106 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_12297754.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:03 Heat of formation + Delta-G solvation = -101.886361 kcal Electronic energy + Delta-G solvation = -27962.020608 eV Core-core repulsion = 24082.915234 eV Total energy + Delta-G solvation = -3879.105374 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.193 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.64032 -40.69404 -39.73527 -37.76404 -37.69074 -35.84750 -33.63441 -33.45858 -32.56198 -31.86776 -29.29588 -28.69952 -27.05341 -26.23358 -24.66416 -23.85102 -22.28964 -21.81840 -20.99235 -20.64333 -20.27287 -19.30679 -18.30557 -17.60973 -16.91201 -16.72802 -16.69990 -16.43483 -16.04415 -15.96387 -15.55783 -15.36620 -15.05830 -14.94154 -14.79112 -14.53918 -14.28232 -14.15169 -13.98548 -13.84453 -13.57240 -13.49553 -13.26314 -13.20247 -13.15181 -12.93026 -12.61923 -12.45455 -12.25396 -12.21378 -12.03816 -11.75065 -11.56119 -11.30610 -11.20725 -10.97377 -10.91151 -10.49938 -10.15727 -9.45837 -8.95856 -4.79281 0.44606 1.24533 1.69090 1.70826 1.95686 2.07151 2.14607 2.44018 3.11441 3.46801 3.47802 3.56906 3.61353 3.65328 3.82931 3.94127 3.99599 4.03200 4.07681 4.16315 4.29367 4.32469 4.32988 4.36729 4.41624 4.44027 4.50274 4.56734 4.65210 4.65640 4.72416 4.73936 4.76881 4.82316 4.93941 4.96324 4.99738 5.05622 5.09539 5.14349 5.15948 5.28894 5.32235 5.40699 5.42546 5.51875 5.75322 5.97148 6.29601 6.47855 6.60738 6.60820 7.21115 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C 0.065 3.935 3 C -0.210 4.210 4 C -0.034 4.034 5 O -0.528 6.528 6 Si 0.653 3.347 7 C -0.042 4.042 8 C -0.090 4.090 9 C -0.066 4.066 10 C 0.590 3.410 11 O -0.522 6.522 12 N -0.733 5.733 13 C 0.125 3.875 14 C -0.100 4.100 15 H 0.077 0.923 16 C -0.115 4.115 17 C -0.110 4.110 18 C -0.089 4.089 19 H 0.078 0.922 20 C 0.078 3.922 21 O -0.574 6.574 22 C -0.112 4.112 23 C -0.110 4.110 24 N -0.535 5.535 25 H 0.087 0.913 26 H 0.087 0.913 27 H 0.102 0.898 28 H 0.112 0.888 29 H 0.374 0.626 30 H -0.255 1.255 31 H -0.261 1.261 32 H 0.065 0.935 33 H 0.074 0.926 34 H 0.076 0.924 35 H 0.393 0.607 36 H 0.071 0.929 37 H 0.071 0.929 38 H 0.059 0.941 39 H 0.067 0.933 40 H 0.059 0.941 41 H 0.071 0.929 42 H 0.045 0.955 43 H 0.045 0.955 44 H 0.380 0.620 45 H 0.067 0.933 46 H 0.065 0.935 47 H 0.070 0.930 48 H 0.069 0.931 49 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.493 -6.589 1.897 8.786 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C -0.053 4.053 3 C -0.216 4.216 4 C -0.145 4.145 5 O -0.334 6.334 6 Si 0.554 3.446 7 C -0.051 4.051 8 C -0.147 4.147 9 C -0.177 4.177 10 C 0.378 3.622 11 O -0.398 6.398 12 N -0.385 5.385 13 C 0.001 3.999 14 C -0.118 4.118 15 H 0.095 0.905 16 C -0.153 4.153 17 C -0.147 4.147 18 C -0.107 4.107 19 H 0.097 0.903 20 C 0.000 4.000 21 O -0.379 6.379 22 C -0.150 4.150 23 C -0.148 4.148 24 N -0.132 5.132 25 H 0.106 0.894 26 H 0.106 0.894 27 H 0.120 0.880 28 H 0.130 0.870 29 H 0.221 0.779 30 H -0.180 1.180 31 H -0.186 1.186 32 H 0.083 0.917 33 H 0.092 0.908 34 H 0.094 0.906 35 H 0.226 0.774 36 H 0.089 0.911 37 H 0.089 0.911 38 H 0.077 0.923 39 H 0.086 0.914 40 H 0.078 0.922 41 H 0.090 0.910 42 H 0.064 0.936 43 H 0.063 0.937 44 H 0.227 0.773 45 H 0.086 0.914 46 H 0.084 0.916 47 H 0.088 0.912 48 H 0.087 0.913 49 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -4.916 -5.165 1.683 7.326 hybrid contribution 0.257 -1.283 -0.577 1.430 sum -4.660 -6.447 1.106 8.032 Atomic orbital electron populations 1.20415 0.87623 1.03678 1.04139 1.20151 0.93398 0.85764 1.06035 1.19588 0.92913 0.94841 1.14306 1.24239 1.01165 0.86837 1.02218 1.86557 1.61194 1.56900 1.28751 0.95600 0.82237 0.83628 0.83153 1.19793 0.94885 0.90682 0.99696 1.20389 0.93859 0.98133 1.02315 1.20115 0.82732 0.94118 1.20778 1.17009 0.87567 0.81209 0.76436 1.90849 1.24171 1.74950 1.49861 1.45890 1.09919 1.05852 1.76810 1.21453 0.87510 0.88027 1.02871 1.21443 0.98225 0.93249 0.98912 0.90455 1.21625 0.99895 0.96531 0.97210 1.21515 0.97045 0.93711 1.02462 1.21171 0.97650 0.93167 0.98726 0.90339 1.22243 0.96422 0.96054 0.85245 1.86471 1.81604 1.34668 1.35199 1.21511 1.00137 0.96461 0.96883 1.21478 0.96687 0.93873 1.02775 1.41745 1.05340 1.08200 1.57889 0.89423 0.89441 0.88019 0.87035 0.77887 1.18033 1.18562 0.91657 0.90766 0.90565 0.77376 0.91054 0.91050 0.92267 0.91447 0.92176 0.91049 0.93625 0.93697 0.77273 0.91391 0.91625 0.91164 0.91253 0.74740 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.49 8.21 36.00 0.30 0.78 16 2 C 0.06 -0.07 6.84 -81.95 -0.56 -0.63 16 3 C -0.21 -0.27 5.38 -105.02 -0.56 -0.83 16 4 C -0.03 -0.02 3.00 36.01 0.11 0.08 16 5 O -0.53 -1.22 10.66 -35.23 -0.38 -1.59 16 6 Si 0.65 -0.41 26.77 -169.99 -4.55 -4.96 16 7 C -0.04 -0.14 6.15 -104.16 -0.64 -0.78 16 8 C -0.09 -0.34 8.72 36.01 0.31 -0.03 16 9 C -0.07 -0.14 7.06 -81.98 -0.58 -0.72 16 10 C 0.59 1.81 7.79 -12.86 -0.10 1.71 16 11 O -0.52 -3.52 14.80 5.19 0.08 -3.44 16 12 N -0.73 0.30 5.28 -61.62 -0.33 -0.03 16 13 C 0.12 -0.06 5.06 -4.04 -0.02 -0.08 16 14 C -0.10 0.23 2.22 -90.62 -0.20 0.03 16 15 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 16 C -0.12 0.23 5.08 -26.73 -0.14 0.09 16 17 C -0.11 0.15 5.10 -26.73 -0.14 0.01 16 18 C -0.09 0.10 2.43 -90.62 -0.22 -0.12 16 19 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 20 C 0.08 -0.10 6.43 37.15 0.24 0.14 16 21 O -0.57 -0.06 13.20 -35.23 -0.46 -0.53 16 22 C -0.11 0.25 5.21 -26.71 -0.14 0.11 16 23 C -0.11 0.24 5.21 -26.71 -0.14 0.10 16 24 N -0.53 0.72 5.99 -5.69 -0.03 0.69 16 25 H 0.09 -0.46 7.13 -51.93 -0.37 -0.83 16 26 H 0.09 -0.58 8.14 -51.93 -0.42 -1.00 16 27 H 0.10 -0.61 5.17 -51.93 -0.27 -0.88 16 28 H 0.11 0.02 7.96 -51.93 -0.41 -0.39 16 29 H 0.37 0.05 8.70 45.56 0.40 0.45 16 30 H -0.26 -0.73 7.11 56.52 0.40 -0.32 16 31 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 32 H 0.06 0.22 8.14 -51.93 -0.42 -0.20 16 33 H 0.07 0.28 7.11 -51.93 -0.37 -0.09 16 34 H 0.08 0.40 6.49 -51.93 -0.34 0.06 16 35 H 0.39 -1.23 6.78 -40.82 -0.28 -1.51 16 36 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 37 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 38 H 0.06 -0.16 7.18 -51.93 -0.37 -0.53 16 39 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.06 -0.10 8.14 -51.93 -0.42 -0.53 16 41 H 0.07 0.01 7.82 -51.93 -0.41 -0.40 16 42 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 43 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 44 H 0.38 -1.48 9.12 45.56 0.42 -1.06 16 45 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 46 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 47 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 48 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 49 H 0.42 -1.94 8.19 -40.82 -0.33 -2.27 16 LS Contribution 376.43 15.07 5.67 5.67 Total: 0.00 -9.56 376.43 -9.93 -19.49 By element: Atomic # 1 Polarization: -7.73 SS G_CDS: -7.45 Total: -15.19 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -2.48 Total: -0.12 kcal Atomic # 7 Polarization: 1.02 SS G_CDS: -0.36 Total: 0.66 kcal Atomic # 8 Polarization: -4.80 SS G_CDS: -0.76 Total: -5.57 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: -4.55 Total: -4.96 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -9.56 -9.93 -19.49 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_12297754.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.393 kcal (2) G-P(sol) polarization free energy of solvation -9.560 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.953 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.933 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.493 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.886 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds