Wall clock time and date at job start Tue Mar 9 2021 12:59:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86304 * 109.47308 * 2 1 4 4 C 1.50709 * 109.47101 * 119.99820 * 2 1 3 5 5 C 1.38417 * 119.88877 * 245.02083 * 4 2 1 6 6 C 1.38248 * 120.33495 * 180.02562 * 5 4 2 7 7 C 1.38283 * 120.11751 * 359.70206 * 6 5 4 8 8 F 1.35096 * 120.10892 * 180.27677 * 7 6 5 9 9 C 1.39858 * 119.77765 * 0.52881 * 7 6 5 10 10 C 1.47696 * 120.16397 * 179.77405 * 9 7 6 11 11 O 1.21569 * 120.00415 * 359.97438 * 10 9 7 12 12 N 1.34784 * 119.99856 * 179.72325 * 10 9 7 13 13 C 1.46499 * 119.99971 * 179.97438 * 12 10 9 14 14 C 1.52992 * 109.47267 * 180.02562 * 13 12 10 15 15 H 1.09006 * 109.47110 * 304.99985 * 14 13 12 16 16 C 1.53003 * 109.47222 * 65.00163 * 14 13 12 17 17 C 1.53004 * 109.47014 * 180.02562 * 16 14 13 18 18 C 1.53001 * 109.46885 * 299.99525 * 17 16 14 19 19 H 1.09006 * 109.47121 * 300.00418 * 18 17 16 20 20 C 1.53002 * 109.47221 * 180.02562 * 18 17 16 21 21 O 1.42898 * 109.47097 * 64.99922 * 20 18 17 22 22 C 1.52999 * 109.47268 * 60.00028 * 18 17 16 23 23 C 1.53001 * 109.47148 * 184.99978 * 14 13 12 24 24 C 1.37898 * 119.88644 * 65.00304 * 4 2 1 25 25 H 0.96700 * 113.99664 * 299.99856 * 1 2 3 26 26 H 1.09000 * 109.47239 * 239.99985 * 2 1 3 27 27 H 1.48501 * 109.99864 * 300.00089 * 3 2 1 28 28 H 1.48497 * 109.99960 * 61.32012 * 3 2 1 29 29 H 1.07996 * 119.83063 * 359.97438 * 5 4 2 30 30 H 1.07995 * 119.94162 * 179.97438 * 6 5 4 31 31 H 0.96999 * 120.00044 * 359.97438 * 12 10 9 32 32 H 1.09004 * 109.47024 * 300.00310 * 13 12 10 33 33 H 1.09005 * 109.47136 * 59.99926 * 13 12 10 34 34 H 1.09000 * 109.46849 * 299.99643 * 16 14 13 35 35 H 1.08993 * 109.47263 * 59.99694 * 16 14 13 36 36 H 1.08994 * 109.46908 * 180.02562 * 17 16 14 37 37 H 1.08990 * 109.47217 * 59.99613 * 17 16 14 38 38 H 1.08992 * 109.47055 * 184.99983 * 20 18 17 39 39 H 1.09000 * 109.46859 * 304.99827 * 20 18 17 40 40 H 0.96700 * 114.00322 * 180.02562 * 21 20 18 41 41 H 1.08997 * 109.47332 * 179.97438 * 22 18 17 42 42 H 1.09006 * 109.46731 * 60.00151 * 22 18 17 43 43 H 1.08996 * 109.47633 * 299.99867 * 23 14 13 44 44 H 1.08999 * 109.47230 * 59.99896 * 23 14 13 45 45 H 1.07998 * 120.06610 * 359.97225 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2306 5 6 2.6391 -0.0090 2.1913 6 6 3.1046 -0.6516 3.3234 7 6 2.8601 -2.0003 3.5058 8 9 3.3103 -2.6268 4.6148 9 6 2.1497 -2.7148 2.5358 10 6 1.8881 -4.1568 2.7195 11 8 2.2908 -4.7256 3.7155 12 7 1.1983 -4.8409 1.7852 13 6 0.9392 -6.2712 1.9671 14 6 0.1445 -6.8016 0.7722 15 1 -0.7613 -6.2084 0.6461 16 6 0.9991 -6.7028 -0.4931 17 6 0.2041 -7.2327 -1.6882 18 6 -0.1743 -8.6944 -1.4412 19 1 0.7313 -9.2879 -1.3153 20 6 -0.9688 -9.2245 -2.6365 21 8 -0.1323 -9.2411 -3.7949 22 6 -1.0288 -8.7933 -0.1760 23 6 -0.2334 -8.2634 1.0194 24 6 1.6841 -2.0569 1.3957 25 1 -0.3933 0.4417 0.7651 26 1 1.7924 -0.5138 -0.8900 27 1 1.5615 2.4679 -1.2085 28 1 1.5880 2.4585 1.2242 29 1 2.8292 1.0454 2.0555 30 1 3.6565 -0.0982 4.0688 31 1 0.8735 -4.3861 0.9923 32 1 1.8865 -6.8058 2.0391 33 1 0.3658 -6.4232 2.8816 34 1 1.2683 -5.6614 -0.6692 35 1 1.9048 -7.2959 -0.3670 36 1 0.8130 -7.1627 -2.5894 37 1 -0.7014 -6.6392 -1.8140 38 1 -1.3143 -10.2360 -2.4234 39 1 -1.8275 -8.5779 -2.8176 40 1 -0.5715 -9.5663 -4.5927 41 1 -1.2988 -9.8346 -0.0003 42 1 -1.9345 -8.1998 -0.3019 43 1 0.6722 -8.8567 1.1455 44 1 -0.8423 -8.3339 1.9208 45 1 1.1310 -2.6016 0.6448 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14939082_12335834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:09 Heat of formation + Delta-G solvation = -153.359312 kcal Electronic energy + Delta-G solvation = -27586.360999 eV Core-core repulsion = 23483.844622 eV Total energy + Delta-G solvation = -4102.516376 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.157 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -50.02978 -41.43820 -40.32618 -39.71601 -37.68507 -37.54223 -35.92090 -33.43571 -32.40533 -32.08751 -31.71425 -28.25242 -26.63405 -25.64150 -24.58114 -23.72575 -22.86624 -21.77642 -21.48397 -20.73736 -19.33846 -18.37731 -18.36570 -18.17671 -17.48120 -17.04542 -16.76395 -16.54007 -16.22916 -16.07564 -15.96346 -15.78827 -15.61802 -15.17667 -14.93740 -14.79476 -14.64678 -14.45640 -14.37490 -13.99368 -13.57681 -13.49947 -13.20084 -13.11026 -12.88548 -12.82056 -12.53741 -12.28307 -12.05936 -11.92835 -11.71856 -11.42298 -11.34446 -11.08588 -11.07259 -10.78573 -10.62512 -10.45701 -10.15448 -9.85570 -4.87606 -0.51370 -0.04523 1.31241 1.58600 1.62798 1.94449 2.01783 2.45799 3.03452 3.29865 3.32799 3.45340 3.52676 3.57365 3.63870 3.71688 3.74080 3.98669 4.06385 4.10404 4.16212 4.29405 4.43087 4.44955 4.47237 4.49684 4.57195 4.59865 4.65320 4.68075 4.74783 4.76017 4.77460 4.84675 4.93356 4.94897 5.07294 5.12444 5.14072 5.18400 5.22522 5.25906 5.33427 5.44645 5.54568 5.58441 6.32035 6.50306 6.88682 7.01141 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.076 4.076 3 Si 0.762 3.238 4 C -0.130 4.130 5 C -0.053 4.053 6 C -0.151 4.151 7 C 0.133 3.867 8 F -0.137 7.137 9 C -0.188 4.188 10 C 0.551 3.449 11 O -0.574 6.574 12 N -0.707 5.707 13 C 0.125 3.875 14 C -0.087 4.087 15 H 0.091 0.909 16 C -0.113 4.113 17 C -0.105 4.105 18 C -0.090 4.090 19 H 0.061 0.939 20 C 0.076 3.924 21 O -0.596 6.596 22 C -0.107 4.107 23 C -0.111 4.111 24 C -0.025 4.025 25 H 0.388 0.612 26 H 0.137 0.863 27 H -0.305 1.305 28 H -0.276 1.276 29 H 0.167 0.833 30 H 0.167 0.833 31 H 0.413 0.587 32 H 0.058 0.942 33 H 0.062 0.938 34 H 0.071 0.929 35 H 0.055 0.945 36 H 0.056 0.944 37 H 0.068 0.932 38 H 0.051 0.949 39 H 0.055 0.945 40 H 0.395 0.605 41 H 0.070 0.930 42 H 0.074 0.926 43 H 0.061 0.939 44 H 0.073 0.927 45 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.254 2.980 -5.115 6.334 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.185 4.185 3 Si 0.667 3.333 4 C -0.131 4.131 5 C -0.070 4.070 6 C -0.170 4.170 7 C 0.113 3.887 8 F -0.115 7.115 9 C -0.192 4.192 10 C 0.339 3.661 11 O -0.454 6.454 12 N -0.360 5.360 13 C 0.001 3.999 14 C -0.106 4.106 15 H 0.109 0.891 16 C -0.151 4.151 17 C -0.143 4.143 18 C -0.109 4.109 19 H 0.080 0.920 20 C -0.002 4.002 21 O -0.404 6.404 22 C -0.145 4.145 23 C -0.149 4.149 24 C -0.043 4.043 25 H 0.238 0.762 26 H 0.154 0.846 27 H -0.233 1.233 28 H -0.202 1.202 29 H 0.184 0.816 30 H 0.185 0.815 31 H 0.252 0.748 32 H 0.076 0.924 33 H 0.080 0.920 34 H 0.089 0.911 35 H 0.074 0.926 36 H 0.075 0.925 37 H 0.087 0.913 38 H 0.069 0.931 39 H 0.073 0.927 40 H 0.244 0.756 41 H 0.089 0.911 42 H 0.092 0.908 43 H 0.080 0.920 44 H 0.092 0.908 45 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -1.661 3.257 -4.499 5.797 hybrid contribution -1.405 -0.620 0.232 1.553 sum -3.066 2.637 -4.267 5.879 Atomic orbital electron populations 1.86601 1.18040 1.80282 1.50323 1.25184 0.83684 1.11553 0.98081 0.94097 0.90287 0.72134 0.76787 1.20394 1.00577 0.94107 0.97991 1.21422 0.93334 1.01105 0.91147 1.21384 1.03250 0.91384 1.00978 1.18219 0.95657 0.91781 0.83070 1.91557 1.86517 1.83032 1.50429 1.20055 1.06966 0.93732 0.98476 1.18362 0.78091 0.86785 0.82850 1.90840 1.52971 1.71108 1.30516 1.45796 1.55759 1.10747 1.23691 1.21469 0.99942 0.79510 0.98948 1.21352 0.98731 0.97500 0.93008 0.89111 1.21605 0.98133 1.01484 0.93848 1.21452 1.00281 0.94988 0.97530 1.21185 0.98880 0.97037 0.93785 0.92037 1.22311 0.92583 0.99809 0.85482 1.86432 1.43329 1.89463 1.21186 1.21469 0.98261 1.01886 0.92837 1.21484 1.00577 0.94322 0.98502 1.21195 0.94663 0.94251 0.94211 0.76240 0.84582 1.23347 1.20226 0.81625 0.81547 0.74797 0.92383 0.91951 0.91084 0.92627 0.92529 0.91287 0.93107 0.92713 0.75570 0.91113 0.90761 0.91992 0.90785 0.82536 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 2.12 12.83 -148.98 -1.91 0.21 16 2 C -0.08 0.54 2.80 71.24 0.20 0.74 16 3 Si 0.76 -5.50 29.87 68.60 2.05 -3.45 16 4 C -0.13 0.73 5.35 -19.90 -0.11 0.62 16 5 C -0.05 0.32 8.66 22.31 0.19 0.52 16 6 C -0.15 0.30 10.01 22.28 0.22 0.52 16 7 C 0.13 0.74 7.29 22.67 0.17 0.91 16 8 F -0.14 -1.75 15.55 44.97 0.70 -1.05 16 9 C -0.19 -0.72 5.88 -20.05 -0.12 -0.84 16 10 C 0.55 4.57 7.77 86.74 0.67 5.25 16 11 O -0.57 -10.33 15.34 -3.93 -0.06 -10.39 16 12 N -0.71 -0.61 5.23 -466.11 -2.44 -3.05 16 13 C 0.12 0.13 5.06 86.38 0.44 0.57 16 14 C -0.09 0.32 2.22 -10.79 -0.02 0.30 16 15 H 0.09 -0.50 8.14 -2.38 -0.02 -0.52 16 16 C -0.11 0.33 5.08 30.60 0.16 0.49 16 17 C -0.11 0.19 5.10 30.60 0.16 0.35 16 18 C -0.09 0.13 2.43 -10.79 -0.03 0.10 16 19 H 0.06 0.12 8.14 -2.38 -0.02 0.10 16 20 C 0.08 -0.15 6.43 71.98 0.46 0.31 16 21 O -0.60 -0.57 13.19 -148.98 -1.97 -2.54 16 22 C -0.11 0.44 5.21 30.61 0.16 0.60 16 23 C -0.11 0.37 5.21 30.61 0.16 0.53 16 24 C -0.02 0.08 9.17 22.52 0.21 0.29 16 25 H 0.39 -3.48 8.70 -74.06 -0.64 -4.13 16 26 H 0.14 -1.29 7.96 -2.39 -0.02 -1.31 16 27 H -0.31 -0.52 7.11 99.48 0.71 0.19 16 28 H -0.28 1.11 7.00 99.48 0.70 1.81 16 29 H 0.17 -1.86 4.81 -2.91 -0.01 -1.87 16 30 H 0.17 -1.01 8.06 -2.91 -0.02 -1.03 16 31 H 0.41 -2.16 5.69 -92.71 -0.53 -2.69 16 32 H 0.06 0.24 8.14 -2.38 -0.02 0.22 16 33 H 0.06 0.20 8.14 -2.38 -0.02 0.18 16 34 H 0.07 -0.34 7.18 -2.39 -0.02 -0.36 16 35 H 0.05 -0.01 8.14 -2.39 -0.02 -0.03 16 36 H 0.06 0.09 7.82 -2.39 -0.02 0.07 16 37 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 38 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 39 H 0.05 -0.22 8.14 -2.39 -0.02 -0.24 16 40 H 0.39 -2.83 9.12 -74.06 -0.68 -3.51 16 41 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 42 H 0.07 -0.40 8.14 -2.38 -0.02 -0.42 16 43 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 44 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 45 H 0.16 -1.21 6.40 -2.91 -0.02 -1.23 16 Total: 0.00 -23.49 363.24 -1.50 -24.99 By element: Atomic # 1 Polarization: -15.17 SS G_CDS: -0.79 Total: -15.96 kcal Atomic # 6 Polarization: 8.33 SS G_CDS: 2.92 Total: 11.25 kcal Atomic # 7 Polarization: -0.61 SS G_CDS: -2.44 Total: -3.05 kcal Atomic # 8 Polarization: -8.78 SS G_CDS: -3.94 Total: -12.72 kcal Atomic # 9 Polarization: -1.75 SS G_CDS: 0.70 Total: -1.05 kcal Atomic # 14 Polarization: -5.50 SS G_CDS: 2.05 Total: -3.45 kcal Total: -23.49 -1.50 -24.99 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_12335834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -128.371 kcal (2) G-P(sol) polarization free energy of solvation -23.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.860 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.499 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.988 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.359 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds