Wall clock time and date at job start Tue Mar 9 2021 12:59:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86306 * 109.46935 * 2 1 4 4 C 1.50694 * 109.47193 * 239.99967 * 2 1 3 5 5 C 1.38227 * 120.00048 * 299.99909 * 4 2 1 6 6 C 1.38238 * 120.00266 * 179.97438 * 5 4 2 7 7 C 1.38245 * 119.99621 * 359.97438 * 6 5 4 8 8 C 1.50693 * 119.99724 * 180.02562 * 7 6 5 9 9 C 1.50694 * 109.47477 * 89.99431 * 8 7 6 10 10 O 1.21286 * 119.99933 * 0.02562 * 9 8 7 11 11 N 1.34782 * 120.00477 * 179.97438 * 9 8 7 12 12 C 1.46493 * 120.00325 * 180.02562 * 11 9 8 13 13 C 1.52997 * 109.47228 * 180.02562 * 12 11 9 14 14 H 1.09002 * 109.47497 * 54.99778 * 13 12 11 15 15 C 1.53002 * 109.47415 * 175.00130 * 13 12 11 16 16 C 1.53000 * 109.47233 * 180.02562 * 15 13 12 17 17 C 1.52997 * 109.47060 * 299.99657 * 16 15 13 18 18 H 1.09002 * 109.47153 * 300.00319 * 17 16 15 19 19 C 1.52992 * 109.47482 * 180.02562 * 17 16 15 20 20 O 1.42900 * 109.47498 * 174.99804 * 19 17 16 21 21 C 1.52999 * 109.47317 * 59.99960 * 17 16 15 22 22 C 1.52997 * 109.47232 * 295.00003 * 13 12 11 23 23 C 1.38230 * 120.00041 * 0.27028 * 7 6 5 24 24 C 1.38238 * 120.00059 * 359.51989 * 23 7 6 25 25 H 0.96703 * 113.99708 * 299.99722 * 1 2 3 26 26 H 1.09000 * 109.47264 * 119.99447 * 2 1 3 27 27 H 1.48490 * 109.99986 * 300.00152 * 3 2 1 28 28 H 1.48498 * 109.99812 * 61.32004 * 3 2 1 29 29 H 1.08002 * 120.00200 * 359.97438 * 5 4 2 30 30 H 1.07995 * 120.00511 * 180.02562 * 6 5 4 31 31 H 1.09000 * 109.47423 * 329.99181 * 8 7 6 32 32 H 1.09001 * 109.46855 * 209.99613 * 8 7 6 33 33 H 0.97003 * 119.99405 * 0.02562 * 11 9 8 34 34 H 1.09000 * 109.47277 * 60.00341 * 12 11 9 35 35 H 1.09001 * 109.47111 * 300.00156 * 12 11 9 36 36 H 1.08992 * 109.47063 * 59.99950 * 15 13 12 37 37 H 1.09004 * 109.46733 * 299.99664 * 15 13 12 38 38 H 1.09002 * 109.47398 * 59.99826 * 16 15 13 39 39 H 1.09001 * 109.47194 * 180.02562 * 16 15 13 40 40 H 1.09001 * 109.47359 * 295.00205 * 19 17 16 41 41 H 1.09002 * 109.46906 * 55.00224 * 19 17 16 42 42 H 0.96702 * 114.00498 * 180.02562 * 20 19 17 43 43 H 1.09000 * 109.47486 * 180.02562 * 21 17 16 44 44 H 1.09002 * 109.46716 * 60.00091 * 21 17 16 45 45 H 1.09002 * 109.47153 * 299.99992 * 22 13 12 46 46 H 1.09001 * 109.47289 * 60.00075 * 22 13 12 47 47 H 1.07999 * 120.00250 * 179.72798 * 23 7 6 48 48 H 1.07994 * 120.00412 * 180.27458 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.5974 -2.0338 -1.4491 6 6 2.0578 -2.6853 -2.5781 7 6 2.8517 -2.0131 -3.4886 8 6 3.3530 -2.7232 -4.7196 9 6 2.3594 -2.5499 -5.8392 10 8 1.3442 -1.9122 -5.6558 11 7 2.5993 -3.1028 -7.0448 12 6 1.6336 -2.9339 -8.1334 13 6 2.1426 -3.6550 -9.3831 14 1 2.3482 -4.6980 -9.1425 15 6 1.0793 -3.5849 -10.4810 16 6 1.5881 -4.3065 -11.7306 17 6 2.8721 -3.6341 -12.2205 18 1 2.6668 -2.5910 -12.4615 19 6 3.3806 -4.3552 -13.4704 20 8 4.5123 -3.6582 -13.9952 21 6 3.9354 -3.7041 -11.1227 22 6 3.4264 -2.9820 -9.8729 23 6 3.1897 -0.6912 -3.2673 24 6 2.7258 -0.0384 -2.1405 25 1 -0.3933 0.4417 0.7651 26 1 1.7923 -0.5137 0.8900 27 1 1.5614 2.4679 -1.2084 28 1 1.5878 2.4585 1.2242 29 1 0.9769 -2.5588 -0.7380 30 1 1.7966 -3.7191 -2.7492 31 1 3.4746 -3.7845 -4.5027 32 1 4.3129 -2.3009 -5.0170 33 1 3.4114 -3.6126 -7.1916 34 1 1.5122 -1.8726 -8.3500 35 1 0.6737 -3.3563 -7.8363 36 1 0.8738 -2.5420 -10.7217 37 1 0.1647 -4.0644 -10.1321 38 1 1.7934 -5.3496 -11.4896 39 1 0.8308 -4.2562 -12.5129 40 1 3.6696 -5.3735 -13.2101 41 1 2.5905 -4.3823 -14.2209 42 1 4.8876 -4.0601 -14.7907 43 1 4.8500 -3.2246 -11.4716 44 1 4.1407 -4.7471 -10.8817 45 1 3.2209 -1.9390 -10.1136 46 1 4.1840 -3.0320 -9.0908 47 1 3.8136 -0.1673 -3.9764 48 1 2.9863 0.9957 -1.9698 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_12335836.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:12 Heat of formation + Delta-G solvation = -115.809402 kcal Electronic energy + Delta-G solvation = -26292.805797 eV Core-core repulsion = 22505.834063 eV Total energy + Delta-G solvation = -3786.971733 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.13661 -40.37842 -39.69360 -37.77040 -37.55680 -35.69639 -34.11498 -32.80219 -31.82872 -31.80786 -29.98798 -27.97263 -25.71990 -24.53658 -23.76765 -23.69966 -21.99820 -21.72504 -21.20175 -20.74933 -18.47201 -18.28653 -18.07642 -17.55658 -16.97880 -16.77652 -16.54999 -16.07757 -15.99185 -15.88553 -15.37541 -15.09490 -14.99955 -14.81049 -14.55979 -14.53293 -14.29114 -14.00727 -13.81880 -13.53613 -13.29780 -13.19659 -13.11094 -12.97850 -12.79740 -12.53632 -12.15909 -12.13370 -11.97274 -11.84093 -11.61874 -11.50338 -11.24764 -11.14889 -10.87920 -10.78883 -10.44190 -10.01468 -9.73944 -9.48162 -4.91830 0.35126 0.59019 1.34142 1.64851 1.74919 2.02723 2.20477 2.84051 3.15765 3.42332 3.54366 3.63445 3.67150 3.67903 3.89393 3.94438 3.99319 4.02502 4.12640 4.13879 4.21396 4.27158 4.35136 4.39135 4.42033 4.42747 4.48077 4.49926 4.55824 4.58637 4.61798 4.71042 4.79755 4.81449 4.86510 4.99050 5.06172 5.08994 5.11326 5.15797 5.18568 5.21931 5.36591 5.42856 5.48765 5.50784 5.67248 5.69230 6.10700 6.50090 6.52599 6.64434 7.31547 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.076 4.076 3 Si 0.681 3.319 4 C -0.073 4.073 5 C -0.090 4.090 6 C -0.104 4.104 7 C -0.064 4.064 8 C -0.103 4.103 9 C 0.512 3.488 10 O -0.527 6.527 11 N -0.732 5.732 12 C 0.123 3.877 13 C -0.099 4.099 14 H 0.078 0.922 15 C -0.111 4.111 16 C -0.112 4.112 17 C -0.089 4.089 18 H 0.078 0.922 19 C 0.078 3.922 20 O -0.574 6.574 21 C -0.110 4.110 22 C -0.115 4.115 23 C -0.099 4.099 24 C -0.112 4.112 25 H 0.379 0.621 26 H 0.076 0.924 27 H -0.255 1.255 28 H -0.262 1.262 29 H 0.124 0.876 30 H 0.122 0.878 31 H 0.104 0.896 32 H 0.105 0.895 33 H 0.400 0.600 34 H 0.068 0.932 35 H 0.067 0.933 36 H 0.068 0.932 37 H 0.068 0.932 38 H 0.065 0.935 39 H 0.066 0.934 40 H 0.045 0.955 41 H 0.045 0.955 42 H 0.380 0.620 43 H 0.071 0.929 44 H 0.060 0.940 45 H 0.065 0.935 46 H 0.062 0.938 47 H 0.125 0.875 48 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.034 -3.961 -1.344 6.545 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.185 4.185 3 Si 0.582 3.418 4 C -0.073 4.073 5 C -0.108 4.108 6 C -0.122 4.122 7 C -0.064 4.064 8 C -0.143 4.143 9 C 0.297 3.703 10 O -0.402 6.402 11 N -0.386 5.386 12 C 0.000 4.000 13 C -0.118 4.118 14 H 0.096 0.904 15 C -0.149 4.149 16 C -0.150 4.150 17 C -0.107 4.107 18 H 0.096 0.904 19 C 0.000 4.000 20 O -0.379 6.379 21 C -0.147 4.147 22 C -0.153 4.153 23 C -0.117 4.117 24 C -0.130 4.130 25 H 0.226 0.774 26 H 0.094 0.906 27 H -0.180 1.180 28 H -0.187 1.187 29 H 0.142 0.858 30 H 0.140 0.860 31 H 0.123 0.877 32 H 0.123 0.877 33 H 0.235 0.765 34 H 0.086 0.914 35 H 0.086 0.914 36 H 0.086 0.914 37 H 0.087 0.913 38 H 0.084 0.916 39 H 0.085 0.915 40 H 0.063 0.937 41 H 0.063 0.937 42 H 0.227 0.773 43 H 0.089 0.911 44 H 0.079 0.921 45 H 0.084 0.916 46 H 0.081 0.919 47 H 0.143 0.857 48 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 4.033 -2.572 -1.257 4.945 hybrid contribution -0.725 -0.860 -0.122 1.131 sum 3.308 -3.432 -1.378 4.962 Atomic orbital electron populations 1.86613 1.17835 1.80084 1.49680 1.24808 0.84446 1.10923 0.98368 0.95165 0.91682 0.74739 0.80203 1.19229 0.98286 0.94383 0.95435 1.20922 0.98391 0.93973 0.97482 1.20992 0.97110 1.00019 0.94095 1.19259 0.98234 0.94266 0.94654 1.20684 0.98882 1.02897 0.91804 1.20589 0.87473 0.78998 0.83193 1.90774 1.27775 1.39514 1.82168 1.46034 1.24987 1.56039 1.11509 1.21415 0.92175 1.00976 0.85479 1.21436 0.96149 1.00148 0.94054 0.90400 1.21472 0.97623 1.01498 0.94261 1.21502 0.96363 0.99632 0.97490 1.21173 0.95105 1.00694 0.93759 0.90385 1.22244 0.87857 0.94678 0.95180 1.86472 1.47548 1.56119 1.47787 1.21524 0.98382 1.00654 0.94182 1.21635 0.96253 0.99954 0.97433 1.20876 1.00100 0.93783 0.96987 1.20868 0.98632 0.99165 0.94314 0.77361 0.90616 1.17981 1.18732 0.85795 0.86000 0.87744 0.87669 0.76524 0.91371 0.91427 0.91356 0.91283 0.91623 0.91479 0.93685 0.93680 0.77301 0.91058 0.92135 0.91579 0.91904 0.85698 0.85592 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.51 12.74 -35.23 -0.45 -1.96 16 2 C -0.08 -0.10 2.81 36.00 0.10 0.00 16 3 Si 0.68 0.24 29.79 -169.99 -5.06 -4.82 16 4 C -0.07 -0.22 5.42 -104.63 -0.57 -0.78 16 5 C -0.09 -0.27 9.61 -39.59 -0.38 -0.65 16 6 C -0.10 -0.25 9.70 -39.58 -0.38 -0.63 16 7 C -0.06 -0.12 4.37 -104.63 -0.46 -0.57 16 8 C -0.10 0.10 5.83 -29.04 -0.17 -0.07 16 9 C 0.51 0.93 7.82 -10.99 -0.09 0.84 16 10 O -0.53 -3.61 16.03 5.55 0.09 -3.52 16 11 N -0.73 0.62 5.28 -60.30 -0.32 0.30 16 12 C 0.12 -0.02 5.06 -4.05 -0.02 -0.04 16 13 C -0.10 0.20 2.22 -90.62 -0.20 -0.01 16 14 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 15 C -0.11 0.19 5.20 -26.73 -0.14 0.05 16 16 C -0.11 0.21 5.20 -26.73 -0.14 0.07 16 17 C -0.09 0.07 2.43 -90.63 -0.22 -0.15 16 18 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 19 C 0.08 -0.07 6.43 37.15 0.24 0.17 16 20 O -0.57 -0.23 13.20 -35.23 -0.46 -0.69 16 21 C -0.11 0.11 5.10 -26.71 -0.14 -0.03 16 22 C -0.12 0.19 5.08 -26.71 -0.14 0.06 16 23 C -0.10 -0.19 9.70 -39.58 -0.38 -0.57 16 24 C -0.11 -0.25 8.67 -39.58 -0.34 -0.59 16 25 H 0.38 -0.53 8.74 45.56 0.40 -0.13 16 26 H 0.08 -0.04 7.96 -51.93 -0.41 -0.46 16 27 H -0.26 -0.99 7.11 56.52 0.40 -0.59 16 28 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 29 H 0.12 0.27 8.06 -52.49 -0.42 -0.15 16 30 H 0.12 0.08 8.06 -52.49 -0.42 -0.34 16 31 H 0.10 -0.33 8.09 -51.93 -0.42 -0.75 16 32 H 0.11 -0.35 8.08 -51.93 -0.42 -0.77 16 33 H 0.40 -1.45 7.65 -40.82 -0.31 -1.76 16 34 H 0.07 0.09 8.14 -51.93 -0.42 -0.34 16 35 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 36 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 38 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 41 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 42 H 0.38 -1.38 9.12 45.56 0.42 -0.96 16 43 H 0.07 0.03 7.82 -51.93 -0.41 -0.37 16 44 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 45 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 46 H 0.06 -0.15 7.18 -51.93 -0.37 -0.53 16 47 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 48 H 0.13 0.04 4.88 -52.49 -0.26 -0.21 16 LS Contribution 383.35 15.07 5.78 5.78 Total: 0.00 -10.06 383.35 -11.18 -21.24 By element: Atomic # 1 Polarization: -6.09 SS G_CDS: -7.33 Total: -13.41 kcal Atomic # 6 Polarization: 0.50 SS G_CDS: -3.42 Total: -2.92 kcal Atomic # 7 Polarization: 0.62 SS G_CDS: -0.32 Total: 0.30 kcal Atomic # 8 Polarization: -5.34 SS G_CDS: -0.82 Total: -6.17 kcal Atomic # 14 Polarization: 0.24 SS G_CDS: -5.06 Total: -4.82 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -10.06 -11.18 -21.24 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_12335836.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.565 kcal (2) G-P(sol) polarization free energy of solvation -10.063 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.629 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.181 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.244 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.809 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds