Wall clock time and date at job start Tue Mar 9 2021 12:59:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47285 * 2 1 4 4 C 1.50697 * 109.47039 * 240.00210 * 2 1 3 5 5 C 1.38322 * 119.92347 * 120.00369 * 4 2 1 6 6 C 1.38474 * 120.28413 * 180.02562 * 5 4 2 7 7 Br 1.89097 * 119.93569 * 179.97438 * 6 5 4 8 8 C 1.38025 * 120.12196 * 359.97438 * 6 5 4 9 9 C 1.39583 * 119.84400 * 0.02562 * 8 6 5 10 10 C 1.47849 * 120.13796 * 180.02562 * 9 8 6 11 11 O 1.21551 * 120.00228 * 180.02562 * 10 9 8 12 12 N 1.34776 * 119.99969 * 359.97438 * 10 9 8 13 13 C 1.46505 * 120.00162 * 180.02562 * 12 10 9 14 14 C 1.52992 * 109.47578 * 180.02562 * 13 12 10 15 15 H 1.09002 * 109.47103 * 54.99567 * 14 13 12 16 16 C 1.52997 * 109.47482 * 174.99814 * 14 13 12 17 17 C 1.53000 * 109.47060 * 180.02562 * 16 14 13 18 18 C 1.53002 * 109.47233 * 299.99657 * 17 16 14 19 19 H 1.09002 * 109.47075 * 300.00932 * 18 17 16 20 20 C 1.52997 * 109.47415 * 180.02562 * 18 17 16 21 21 O 1.42892 * 109.47178 * 175.00180 * 20 18 17 22 22 C 1.52997 * 109.46817 * 60.00194 * 18 17 16 23 23 C 1.52999 * 109.46961 * 295.00174 * 14 13 12 24 24 C 1.37989 * 119.92238 * 300.29668 * 4 2 1 25 25 H 0.96706 * 114.00126 * 60.00011 * 1 2 3 26 26 H 1.08997 * 109.47041 * 120.00168 * 2 1 3 27 27 H 1.48504 * 109.99755 * 59.99815 * 3 2 1 28 28 H 1.48494 * 110.00274 * 181.31890 * 3 2 1 29 29 H 1.08000 * 119.85734 * 0.04167 * 5 4 2 30 30 H 1.08004 * 120.07449 * 179.97438 * 8 6 5 31 31 H 0.96998 * 120.00301 * 0.02562 * 12 10 9 32 32 H 1.09001 * 109.47096 * 59.99598 * 13 12 10 33 33 H 1.09002 * 109.46667 * 299.99886 * 13 12 10 34 34 H 1.09002 * 109.47153 * 59.99783 * 16 14 13 35 35 H 1.09001 * 109.46832 * 299.99974 * 16 14 13 36 36 H 1.08992 * 109.47399 * 59.99823 * 17 16 14 37 37 H 1.09004 * 109.46724 * 180.02562 * 17 16 14 38 38 H 1.09000 * 109.46818 * 295.00198 * 20 18 17 39 39 H 1.09001 * 109.47096 * 55.00094 * 20 18 17 40 40 H 0.96703 * 114.00148 * 179.97438 * 21 20 18 41 41 H 1.09002 * 109.47153 * 60.00231 * 22 18 17 42 42 H 1.09001 * 109.47289 * 180.02562 * 22 18 17 43 43 H 1.09000 * 109.47486 * 59.99547 * 23 14 13 44 44 H 1.09002 * 109.46716 * 299.99630 * 23 14 13 45 45 H 1.07998 * 120.06286 * 359.97438 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7264 -0.0366 -2.1399 6 6 3.1917 -0.6819 -3.2733 7 35 4.2775 0.2488 -4.5104 8 6 2.8643 -2.0032 -3.5017 9 6 2.0622 -2.6881 -2.5874 10 6 1.7079 -4.1036 -2.8254 11 8 1.0089 -4.6976 -2.0278 12 7 2.1592 -4.7352 -3.9271 13 6 1.8078 -6.1378 -4.1632 14 6 2.4435 -6.6095 -5.4724 15 1 3.5182 -6.4303 -5.4397 16 6 2.1813 -8.1056 -5.6567 17 6 2.8176 -8.5774 -6.9657 18 6 2.2076 -7.8047 -8.1369 19 1 1.1329 -7.9838 -8.1699 20 6 2.8434 -8.2769 -9.4459 21 8 2.1933 -7.6406 -10.5479 22 6 2.4698 -6.3086 -7.9526 23 6 1.8330 -5.8367 -6.6432 24 6 1.5919 -2.0297 -1.4504 25 1 -0.3934 0.4417 -0.7651 26 1 1.7923 -0.5138 0.8899 27 1 1.5614 2.4678 1.2085 28 1 3.5345 1.7703 -0.0321 29 1 2.9858 0.9971 -1.9650 30 1 3.2272 -2.5056 -4.3862 31 1 2.7168 -4.2612 -4.5638 32 1 0.7241 -6.2346 -4.2294 33 1 2.1775 -6.7485 -3.3395 34 1 1.1066 -8.2848 -5.6894 35 1 2.6163 -8.6561 -4.8225 36 1 3.8922 -8.3982 -6.9326 37 1 2.6304 -9.6431 -7.0972 38 1 3.9021 -8.0178 -9.4497 39 1 2.7335 -9.3577 -9.5341 40 1 2.5461 -7.8934 -11.4121 41 1 3.5444 -6.1295 -7.9195 42 1 2.0348 -5.7580 -8.7867 43 1 2.0198 -4.7709 -6.5119 44 1 0.7583 -6.0159 -6.6759 45 1 0.9673 -2.5530 -0.7416 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_12335870.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:36 Heat of formation + Delta-G solvation = -106.713418 kcal Electronic energy + Delta-G solvation = -26824.080129 eV Core-core repulsion = 22853.222443 eV Total energy + Delta-G solvation = -3970.857686 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.077 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -41.58694 -40.46821 -39.68651 -37.75797 -37.64601 -35.87651 -33.64488 -33.58399 -32.41666 -31.82957 -30.50111 -28.38831 -27.05661 -25.64864 -24.30832 -23.66942 -22.83862 -21.78273 -21.42206 -20.80900 -19.20620 -18.28282 -17.98615 -17.64084 -17.27069 -16.75428 -16.43101 -16.30983 -16.14261 -15.96564 -15.61799 -15.27929 -15.08997 -14.98397 -14.85649 -14.62419 -14.36169 -14.22959 -13.91258 -13.52875 -13.31633 -13.22830 -13.02186 -12.92769 -12.60680 -12.20950 -12.18008 -12.02561 -11.97374 -11.95071 -11.52914 -11.50441 -11.29412 -11.17535 -11.04891 -10.88176 -10.63523 -10.33043 -10.10863 -9.94467 -5.15541 -0.52360 -0.20260 0.37283 1.13245 1.50302 1.59799 1.86209 2.00688 2.49910 3.14488 3.19523 3.30500 3.40771 3.50705 3.60515 3.64353 3.74491 3.81945 3.93426 3.97613 4.06618 4.17703 4.19796 4.23378 4.32585 4.35921 4.39536 4.43615 4.45621 4.53867 4.59230 4.66770 4.70271 4.74839 4.82515 4.91212 4.96444 5.02737 5.05350 5.09011 5.12710 5.17551 5.28787 5.35086 5.38280 5.44545 6.34273 6.45112 6.63856 7.08887 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.067 4.067 3 Si 0.684 3.316 4 C -0.119 4.119 5 C -0.065 4.065 6 C -0.094 4.094 7 Br -0.033 7.033 8 C -0.054 4.054 9 C -0.127 4.127 10 C 0.560 3.440 11 O -0.527 6.527 12 N -0.724 5.724 13 C 0.123 3.877 14 C -0.100 4.100 15 H 0.078 0.922 16 C -0.110 4.110 17 C -0.112 4.112 18 C -0.089 4.089 19 H 0.078 0.922 20 C 0.078 3.922 21 O -0.574 6.574 22 C -0.110 4.110 23 C -0.116 4.116 24 C -0.018 4.018 25 H 0.381 0.619 26 H 0.121 0.879 27 H -0.248 1.248 28 H -0.253 1.253 29 H 0.142 0.858 30 H 0.138 0.862 31 H 0.400 0.600 32 H 0.073 0.927 33 H 0.072 0.928 34 H 0.069 0.931 35 H 0.069 0.931 36 H 0.065 0.935 37 H 0.067 0.933 38 H 0.045 0.955 39 H 0.045 0.955 40 H 0.380 0.620 41 H 0.060 0.940 42 H 0.071 0.929 43 H 0.061 0.939 44 H 0.067 0.933 45 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.497 0.380 -4.597 5.245 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.178 4.178 3 Si 0.585 3.415 4 C -0.121 4.121 5 C -0.085 4.085 6 C -0.174 4.174 7 Br 0.053 6.947 8 C -0.075 4.075 9 C -0.131 4.131 10 C 0.346 3.654 11 O -0.404 6.404 12 N -0.376 5.376 13 C -0.001 4.001 14 C -0.119 4.119 15 H 0.097 0.903 16 C -0.148 4.148 17 C -0.150 4.150 18 C -0.107 4.107 19 H 0.097 0.903 20 C 0.000 4.000 21 O -0.379 6.379 22 C -0.148 4.148 23 C -0.154 4.154 24 C -0.037 4.037 25 H 0.228 0.772 26 H 0.138 0.862 27 H -0.173 1.173 28 H -0.178 1.178 29 H 0.159 0.841 30 H 0.155 0.845 31 H 0.236 0.764 32 H 0.091 0.909 33 H 0.090 0.910 34 H 0.087 0.913 35 H 0.088 0.912 36 H 0.084 0.916 37 H 0.086 0.914 38 H 0.063 0.937 39 H 0.063 0.937 40 H 0.227 0.773 41 H 0.079 0.921 42 H 0.090 0.910 43 H 0.080 0.920 44 H 0.086 0.914 45 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.627 0.831 -3.026 4.092 hybrid contribution 0.608 -0.915 -0.451 1.188 sum 3.235 -0.084 -3.477 4.750 Atomic orbital electron populations 1.86548 1.16548 1.81634 1.49281 1.25083 0.85662 1.10152 0.96896 0.94812 0.81228 0.77613 0.87803 1.20385 0.99215 0.94941 0.97509 1.21220 0.95396 0.99806 0.92033 1.21643 1.02913 0.95654 0.97142 1.96845 1.65795 1.75382 1.56676 1.21278 0.95244 0.92561 0.98415 1.19977 1.01661 0.94307 0.97132 1.18092 0.79972 0.85909 0.81406 1.90829 1.37193 1.67117 1.45237 1.45927 1.53745 1.13578 1.24388 1.21499 1.00674 0.80659 0.97228 1.21453 1.00676 0.96219 0.93570 0.90319 1.21466 1.01679 0.94066 0.97573 1.21503 1.00241 0.99620 0.93643 1.21173 1.01153 0.95821 0.92567 0.90347 1.22241 0.95403 0.95657 0.86664 1.86471 1.63276 1.71066 1.17099 1.21524 1.00695 0.95167 0.97366 1.21647 1.00662 0.99102 0.93959 1.21299 0.94437 0.92880 0.95071 0.77172 0.86179 1.17274 1.17798 0.84103 0.84452 0.76433 0.90908 0.90995 0.91261 0.91212 0.91610 0.91428 0.93692 0.93672 0.77290 0.92114 0.90993 0.92015 0.91425 0.83358 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.13 12.76 -35.23 -0.45 -0.32 16 2 C -0.07 0.06 2.82 36.00 0.10 0.16 16 3 Si 0.68 -1.16 29.78 -169.99 -5.06 -6.22 16 4 C -0.12 0.06 5.39 -104.68 -0.56 -0.51 16 5 C -0.07 0.06 8.41 -39.46 -0.33 -0.27 16 6 C -0.09 0.06 6.22 -39.57 -0.25 -0.18 16 7 Br -0.03 0.02 33.69 -68.01 -2.29 -2.27 16 8 C -0.05 0.05 9.28 -39.16 -0.36 -0.31 16 9 C -0.13 -0.09 5.87 -104.97 -0.62 -0.71 16 10 C 0.56 1.21 7.77 -12.33 -0.10 1.12 16 11 O -0.53 -3.18 16.35 5.32 0.09 -3.09 16 12 N -0.72 0.47 5.24 -61.25 -0.32 0.14 16 13 C 0.12 -0.09 5.06 -4.04 -0.02 -0.11 16 14 C -0.10 0.23 2.22 -90.63 -0.20 0.03 16 15 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 16 C -0.11 0.24 5.20 -26.73 -0.14 0.10 16 17 C -0.11 0.24 5.20 -26.73 -0.14 0.11 16 18 C -0.09 0.10 2.43 -90.62 -0.22 -0.12 16 19 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 20 C 0.08 -0.09 6.43 37.16 0.24 0.15 16 21 O -0.57 -0.14 13.20 -35.23 -0.46 -0.61 16 22 C -0.11 0.13 5.10 -26.70 -0.14 -0.01 16 23 C -0.12 0.22 5.08 -26.70 -0.14 0.09 16 24 C -0.02 -0.02 9.15 -39.18 -0.36 -0.38 16 25 H 0.38 -1.59 8.70 45.56 0.40 -1.19 16 26 H 0.12 -0.06 7.96 -51.93 -0.41 -0.48 16 27 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 28 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 29 H 0.14 -0.34 4.86 -52.49 -0.26 -0.60 16 30 H 0.14 -0.44 6.41 -52.48 -0.34 -0.77 16 31 H 0.40 -1.18 5.69 -40.82 -0.23 -1.41 16 32 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 33 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 35 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 36 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 37 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 38 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.38 -1.42 9.12 45.56 0.42 -1.00 16 41 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 42 H 0.07 0.02 7.82 -51.93 -0.41 -0.38 16 43 H 0.06 -0.15 7.18 -51.93 -0.37 -0.53 16 44 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 45 H 0.15 0.30 7.65 -52.49 -0.40 -0.10 16 LS Contribution 379.95 15.07 5.73 5.73 Total: 0.00 -7.89 379.95 -11.88 -19.77 By element: Atomic # 1 Polarization: -6.43 SS G_CDS: -5.88 Total: -12.30 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: -3.23 Total: -0.83 kcal Atomic # 7 Polarization: 0.47 SS G_CDS: -0.32 Total: 0.14 kcal Atomic # 8 Polarization: -3.19 SS G_CDS: -0.83 Total: -4.02 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.06 Total: -6.22 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.27 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -7.89 -11.88 -19.77 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_12335870.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.941 kcal (2) G-P(sol) polarization free energy of solvation -7.893 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.834 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.880 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.772 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.713 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds