Wall clock time and date at job start Tue Mar 9 2021 12:59:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47285 * 2 1 4 4 C 1.50697 * 109.47039 * 240.00210 * 2 1 3 5 5 C 1.38322 * 119.92347 * 120.00369 * 4 2 1 6 6 C 1.38474 * 120.28413 * 180.02562 * 5 4 2 7 7 Br 1.89097 * 119.93569 * 179.97438 * 6 5 4 8 8 C 1.38025 * 120.12196 * 359.97438 * 6 5 4 9 9 C 1.39583 * 119.84400 * 0.02562 * 8 6 5 10 10 C 1.47849 * 120.13796 * 180.02562 * 9 8 6 11 11 O 1.21551 * 120.00228 * 180.02562 * 10 9 8 12 12 N 1.34776 * 119.99969 * 359.97438 * 10 9 8 13 13 C 1.46505 * 120.00162 * 180.02562 * 12 10 9 14 14 C 1.52992 * 109.47578 * 180.02562 * 13 12 10 15 15 H 1.09002 * 109.47103 * 54.99567 * 14 13 12 16 16 C 1.52997 * 109.47482 * 174.99814 * 14 13 12 17 17 C 1.53000 * 109.47060 * 180.02562 * 16 14 13 18 18 C 1.53002 * 109.47233 * 299.99657 * 17 16 14 19 19 H 1.09002 * 109.47075 * 300.00932 * 18 17 16 20 20 C 1.52997 * 109.47415 * 180.02562 * 18 17 16 21 21 O 1.42892 * 109.47178 * 175.00180 * 20 18 17 22 22 C 1.52997 * 109.46817 * 60.00194 * 18 17 16 23 23 C 1.52999 * 109.46961 * 295.00174 * 14 13 12 24 24 C 1.37989 * 119.92238 * 300.29668 * 4 2 1 25 25 H 0.96706 * 114.00126 * 60.00011 * 1 2 3 26 26 H 1.08997 * 109.47041 * 120.00168 * 2 1 3 27 27 H 1.48504 * 109.99755 * 59.99815 * 3 2 1 28 28 H 1.48494 * 110.00274 * 181.31890 * 3 2 1 29 29 H 1.08000 * 119.85734 * 0.04167 * 5 4 2 30 30 H 1.08004 * 120.07449 * 179.97438 * 8 6 5 31 31 H 0.96998 * 120.00301 * 0.02562 * 12 10 9 32 32 H 1.09001 * 109.47096 * 59.99598 * 13 12 10 33 33 H 1.09002 * 109.46667 * 299.99886 * 13 12 10 34 34 H 1.09002 * 109.47153 * 59.99783 * 16 14 13 35 35 H 1.09001 * 109.46832 * 299.99974 * 16 14 13 36 36 H 1.08992 * 109.47399 * 59.99823 * 17 16 14 37 37 H 1.09004 * 109.46724 * 180.02562 * 17 16 14 38 38 H 1.09000 * 109.46818 * 295.00198 * 20 18 17 39 39 H 1.09001 * 109.47096 * 55.00094 * 20 18 17 40 40 H 0.96703 * 114.00148 * 179.97438 * 21 20 18 41 41 H 1.09002 * 109.47153 * 60.00231 * 22 18 17 42 42 H 1.09001 * 109.47289 * 180.02562 * 22 18 17 43 43 H 1.09000 * 109.47486 * 59.99547 * 23 14 13 44 44 H 1.09002 * 109.46716 * 299.99630 * 23 14 13 45 45 H 1.07998 * 120.06286 * 359.97438 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7264 -0.0366 -2.1399 6 6 3.1917 -0.6819 -3.2733 7 35 4.2775 0.2488 -4.5104 8 6 2.8643 -2.0032 -3.5017 9 6 2.0622 -2.6881 -2.5874 10 6 1.7079 -4.1036 -2.8254 11 8 1.0089 -4.6976 -2.0278 12 7 2.1592 -4.7352 -3.9271 13 6 1.8078 -6.1378 -4.1632 14 6 2.4435 -6.6095 -5.4724 15 1 3.5182 -6.4303 -5.4397 16 6 2.1813 -8.1056 -5.6567 17 6 2.8176 -8.5774 -6.9657 18 6 2.2076 -7.8047 -8.1369 19 1 1.1329 -7.9838 -8.1699 20 6 2.8434 -8.2769 -9.4459 21 8 2.1933 -7.6406 -10.5479 22 6 2.4698 -6.3086 -7.9526 23 6 1.8330 -5.8367 -6.6432 24 6 1.5919 -2.0297 -1.4504 25 1 -0.3934 0.4417 -0.7651 26 1 1.7923 -0.5138 0.8899 27 1 1.5614 2.4678 1.2085 28 1 3.5345 1.7703 -0.0321 29 1 2.9858 0.9971 -1.9650 30 1 3.2272 -2.5056 -4.3862 31 1 2.7168 -4.2612 -4.5638 32 1 0.7241 -6.2346 -4.2294 33 1 2.1775 -6.7485 -3.3395 34 1 1.1066 -8.2848 -5.6894 35 1 2.6163 -8.6561 -4.8225 36 1 3.8922 -8.3982 -6.9326 37 1 2.6304 -9.6431 -7.0972 38 1 3.9021 -8.0178 -9.4497 39 1 2.7335 -9.3577 -9.5341 40 1 2.5461 -7.8934 -11.4121 41 1 3.5444 -6.1295 -7.9195 42 1 2.0348 -5.7580 -8.7867 43 1 2.0198 -4.7709 -6.5119 44 1 0.7583 -6.0159 -6.6759 45 1 0.9673 -2.5530 -0.7416 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14939082_12335870.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:35 Heat of formation + Delta-G solvation = -106.152150 kcal Electronic energy + Delta-G solvation = -26824.055790 eV Core-core repulsion = 22853.222443 eV Total energy + Delta-G solvation = -3970.833347 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.077 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.64313 -40.40443 -39.71727 -37.70930 -37.61920 -35.93764 -33.61977 -33.57815 -32.36699 -31.70019 -30.46156 -28.35042 -27.01423 -25.62289 -24.26667 -23.55511 -22.81831 -21.72201 -21.44473 -20.70884 -19.20808 -18.21260 -17.95806 -17.65601 -17.28260 -16.75104 -16.40281 -16.27908 -16.15777 -15.89688 -15.60612 -15.21601 -15.04726 -14.97749 -14.80013 -14.59282 -14.36109 -14.18205 -13.89279 -13.48352 -13.27086 -13.10403 -13.03037 -12.83618 -12.52475 -12.20580 -12.04482 -11.96697 -11.96421 -11.90671 -11.50793 -11.40656 -11.28934 -11.07178 -11.06691 -10.77876 -10.60823 -10.37728 -10.11464 -9.91852 -5.05496 -0.53110 -0.17549 0.42086 1.20912 1.50251 1.59149 1.90345 1.98665 2.45470 3.25838 3.30850 3.34999 3.52723 3.61746 3.72848 3.75099 3.80190 3.86522 3.94765 4.09292 4.15903 4.21126 4.27809 4.30990 4.44767 4.46923 4.48882 4.50980 4.58761 4.65997 4.69437 4.74443 4.76553 4.79262 4.91624 4.95413 5.07334 5.08913 5.15545 5.19218 5.24083 5.26700 5.33820 5.37591 5.46105 5.56095 6.33051 6.70635 6.88938 7.00598 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.075 4.075 3 Si 0.773 3.227 4 C -0.116 4.116 5 C -0.061 4.061 6 C -0.098 4.098 7 Br -0.027 7.027 8 C -0.045 4.045 9 C -0.135 4.135 10 C 0.557 3.443 11 O -0.575 6.575 12 N -0.709 5.709 13 C 0.124 3.876 14 C -0.088 4.088 15 H 0.092 0.908 16 C -0.111 4.111 17 C -0.107 4.107 18 C -0.090 4.090 19 H 0.061 0.939 20 C 0.075 3.925 21 O -0.596 6.596 22 C -0.106 4.106 23 C -0.114 4.114 24 C -0.030 4.030 25 H 0.397 0.603 26 H 0.113 0.887 27 H -0.294 1.294 28 H -0.276 1.276 29 H 0.157 0.843 30 H 0.161 0.839 31 H 0.413 0.587 32 H 0.059 0.941 33 H 0.064 0.936 34 H 0.061 0.939 35 H 0.074 0.926 36 H 0.074 0.926 37 H 0.069 0.931 38 H 0.055 0.945 39 H 0.050 0.950 40 H 0.395 0.605 41 H 0.069 0.931 42 H 0.055 0.945 43 H 0.071 0.929 44 H 0.055 0.945 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.842 0.973 -5.713 6.953 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.185 4.185 3 Si 0.677 3.323 4 C -0.117 4.117 5 C -0.081 4.081 6 C -0.178 4.178 7 Br 0.059 6.941 8 C -0.065 4.065 9 C -0.139 4.139 10 C 0.345 3.655 11 O -0.455 6.455 12 N -0.361 5.361 13 C 0.001 3.999 14 C -0.107 4.107 15 H 0.110 0.890 16 C -0.149 4.149 17 C -0.145 4.145 18 C -0.109 4.109 19 H 0.079 0.921 20 C -0.002 4.002 21 O -0.405 6.405 22 C -0.143 4.143 23 C -0.151 4.151 24 C -0.049 4.049 25 H 0.247 0.753 26 H 0.130 0.870 27 H -0.221 1.221 28 H -0.202 1.202 29 H 0.174 0.826 30 H 0.178 0.822 31 H 0.251 0.749 32 H 0.078 0.922 33 H 0.083 0.917 34 H 0.080 0.920 35 H 0.093 0.907 36 H 0.093 0.907 37 H 0.088 0.912 38 H 0.073 0.927 39 H 0.068 0.932 40 H 0.244 0.756 41 H 0.088 0.912 42 H 0.074 0.926 43 H 0.090 0.910 44 H 0.074 0.926 45 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 3.984 1.411 -4.214 5.968 hybrid contribution 0.179 -1.097 -0.114 1.118 sum 4.164 0.313 -4.328 6.014 Atomic orbital electron populations 1.86510 1.16885 1.82156 1.50541 1.25265 0.85594 1.11110 0.96533 0.93815 0.78312 0.74688 0.85459 1.20346 0.99268 0.94331 0.97741 1.21388 0.94613 1.00454 0.91609 1.21738 1.02946 0.95794 0.97301 1.96861 1.65611 1.75248 1.56428 1.21442 0.94135 0.92467 0.98488 1.19871 1.02689 0.93663 0.97718 1.18362 0.79357 0.86427 0.81369 1.90802 1.39530 1.68222 1.46970 1.45843 1.52935 1.13592 1.23715 1.21485 1.00059 0.80488 0.97889 1.21359 1.01091 0.96003 0.92232 0.89020 1.21475 1.01351 0.94169 0.97886 1.21463 1.00551 0.99564 0.92897 1.21184 1.00237 0.96157 0.93303 0.92074 1.22317 0.95765 0.95892 0.86236 1.86432 1.64068 1.71600 1.18350 1.21468 1.01061 0.94871 0.96920 1.21620 0.99921 0.99733 0.93835 1.21249 0.94892 0.93593 0.95215 0.75283 0.86960 1.22115 1.20204 0.82563 0.82192 0.74855 0.92212 0.91721 0.91999 0.90731 0.90736 0.91187 0.92698 0.93152 0.75582 0.91220 0.92614 0.91049 0.92625 0.85189 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.08 12.76 -148.98 -1.90 -1.98 16 2 C -0.08 0.09 2.82 71.23 0.20 0.29 16 3 Si 0.77 -2.74 29.78 68.60 2.04 -0.69 16 4 C -0.12 0.08 5.39 -19.90 -0.11 -0.03 16 5 C -0.06 0.17 8.41 22.35 0.19 0.36 16 6 C -0.10 0.24 6.22 22.28 0.14 0.38 16 7 Br -0.03 0.08 33.69 -20.37 -0.69 -0.61 16 8 C -0.04 0.13 9.28 22.54 0.21 0.34 16 9 C -0.14 -0.25 5.87 -20.09 -0.12 -0.37 16 10 C 0.56 2.99 7.77 86.79 0.67 3.67 16 11 O -0.57 -8.21 16.35 -3.88 -0.06 -8.27 16 12 N -0.71 0.87 5.24 -465.97 -2.44 -1.57 16 13 C 0.12 -0.11 5.06 86.38 0.44 0.33 16 14 C -0.09 0.45 2.22 -10.80 -0.02 0.42 16 15 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 16 C -0.11 0.50 5.20 30.59 0.16 0.66 16 17 C -0.11 0.52 5.20 30.60 0.16 0.68 16 18 C -0.09 0.19 2.43 -10.79 -0.03 0.16 16 19 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 20 C 0.08 -0.19 6.43 71.98 0.46 0.28 16 21 O -0.60 -0.37 13.20 -148.98 -1.97 -2.33 16 22 C -0.11 0.27 5.10 30.61 0.16 0.43 16 23 C -0.11 0.46 5.08 30.61 0.16 0.61 16 24 C -0.03 -0.10 9.15 22.53 0.21 0.11 16 25 H 0.40 -3.27 8.70 -74.05 -0.64 -3.91 16 26 H 0.11 0.01 7.96 -2.39 -0.02 -0.01 16 27 H -0.29 -1.20 7.11 99.48 0.71 -0.49 16 28 H -0.28 -0.07 7.11 99.48 0.71 0.64 16 29 H 0.16 -0.98 4.86 -2.91 -0.01 -1.00 16 30 H 0.16 -1.31 6.41 -2.91 -0.02 -1.33 16 31 H 0.41 -2.88 5.69 -92.71 -0.53 -3.41 16 32 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 33 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 34 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 35 H 0.07 -0.38 8.14 -2.39 -0.02 -0.40 16 36 H 0.07 -0.46 8.14 -2.39 -0.02 -0.48 16 37 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 38 H 0.05 -0.25 8.14 -2.39 -0.02 -0.27 16 39 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 40 H 0.39 -2.95 9.12 -74.05 -0.68 -3.63 16 41 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 42 H 0.06 0.06 7.82 -2.39 -0.02 0.04 16 43 H 0.07 -0.42 7.18 -2.39 -0.02 -0.44 16 44 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 45 H 0.13 0.87 7.65 -2.91 -0.02 0.85 16 Total: 0.00 -19.68 379.95 -2.92 -22.60 By element: Atomic # 1 Polarization: -14.68 SS G_CDS: -0.78 Total: -15.45 kcal Atomic # 6 Polarization: 5.45 SS G_CDS: 2.87 Total: 8.32 kcal Atomic # 7 Polarization: 0.87 SS G_CDS: -2.44 Total: -1.57 kcal Atomic # 8 Polarization: -8.65 SS G_CDS: -3.93 Total: -12.58 kcal Atomic # 14 Polarization: -2.74 SS G_CDS: 2.04 Total: -0.69 kcal Atomic # 35 Polarization: 0.08 SS G_CDS: -0.69 Total: -0.61 kcal Total: -19.68 -2.92 -22.60 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_12335870.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.557 kcal (2) G-P(sol) polarization free energy of solvation -19.678 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.235 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.917 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.595 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.152 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds