Wall clock time and date at job start Tue Mar 9 2021 13:00:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86298 * 109.47138 * 2 1 4 4 C 1.50703 * 109.47119 * 120.00258 * 2 1 3 5 5 C 1.34187 * 126.53742 * 254.97240 * 4 2 1 6 6 N 1.36863 * 109.96710 * 179.97438 * 5 4 2 7 7 C 1.37406 * 109.97913 * 0.02562 * 6 5 4 8 8 C 1.39333 * 133.24999 * 180.02562 * 7 6 5 9 9 C 1.36353 * 120.23643 * 179.97438 * 8 7 6 10 10 C 1.40168 * 120.66530 * 0.26199 * 9 8 7 11 11 C 1.47658 * 119.96810 * 179.73808 * 10 9 8 12 12 O 1.21581 * 120.00043 * 179.97438 * 11 10 9 13 13 N 1.34778 * 120.00461 * 0.02562 * 11 10 9 14 14 C 1.46495 * 120.00065 * 179.97438 * 13 11 10 15 15 C 1.53004 * 109.46898 * 179.97438 * 14 13 11 16 16 H 1.09003 * 109.46967 * 54.99979 * 15 14 13 17 17 C 1.52994 * 109.47155 * 174.99979 * 15 14 13 18 18 C 1.53004 * 109.47189 * 180.02562 * 17 15 14 19 19 C 1.53001 * 109.46891 * 299.99755 * 18 17 15 20 20 H 1.09003 * 109.47192 * 300.00086 * 19 18 17 21 21 C 1.52992 * 109.47111 * 180.02562 * 19 18 17 22 22 O 1.42904 * 109.47397 * 175.00197 * 21 19 18 23 23 C 1.52994 * 109.47004 * 60.00131 * 19 18 17 24 24 C 1.53001 * 109.47231 * 294.99921 * 15 14 13 25 25 C 1.39184 * 120.05807 * 359.48442 * 10 9 8 26 26 C 1.39231 * 119.38990 * 0.50262 * 25 10 9 27 27 H 0.96700 * 113.99930 * 300.00104 * 1 2 3 28 28 H 1.09004 * 109.46910 * 239.99899 * 2 1 3 29 29 H 1.48499 * 110.00085 * 300.00140 * 3 2 1 30 30 H 1.48497 * 109.99909 * 61.31901 * 3 2 1 31 31 H 1.08001 * 125.01670 * 0.02562 * 5 4 2 32 32 H 0.96993 * 125.01116 * 179.97438 * 6 5 4 33 33 H 1.07997 * 119.87939 * 359.95512 * 8 7 6 34 34 H 1.08002 * 119.66194 * 179.97438 * 9 8 7 35 35 H 0.97000 * 119.99752 * 359.97438 * 13 11 10 36 36 H 1.09000 * 109.47384 * 299.99573 * 14 13 11 37 37 H 1.08993 * 109.47220 * 60.00248 * 14 13 11 38 38 H 1.09000 * 109.47105 * 299.99889 * 17 15 14 39 39 H 1.08995 * 109.47372 * 59.99837 * 17 15 14 40 40 H 1.08989 * 109.47418 * 59.99916 * 18 17 15 41 41 H 1.09000 * 109.46990 * 180.02562 * 18 17 15 42 42 H 1.09001 * 109.47176 * 294.99706 * 21 19 18 43 43 H 1.08993 * 109.47555 * 54.99883 * 21 19 18 44 44 H 0.96698 * 114.00030 * 179.97438 * 22 21 19 45 45 H 1.08995 * 109.47372 * 60.00244 * 23 19 18 46 46 H 1.09000 * 109.47105 * 180.02562 * 23 19 18 47 47 H 1.08995 * 109.46857 * 299.99893 * 24 15 14 48 48 H 1.09000 * 109.46803 * 60.00332 * 24 15 14 49 49 H 1.07992 * 120.30632 * 180.25506 * 25 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 2.4612 -0.1388 2.3227 6 7 2.8026 -1.1005 3.2347 7 6 2.4947 -2.3455 2.7416 8 6 2.6323 -3.6350 3.2511 9 6 2.2278 -4.7103 2.5168 10 6 1.6743 -4.5371 1.2407 11 6 1.2467 -5.7128 0.4564 12 8 0.7662 -5.5632 -0.6504 13 7 1.3881 -6.9518 0.9677 14 6 0.9633 -8.1181 0.1898 15 6 1.2322 -9.3923 0.9930 16 1 0.7460 -9.3181 1.9657 17 6 0.6759 -10.5996 0.2355 18 6 0.9443 -11.8737 1.0390 19 6 2.4521 -12.0450 1.2348 20 1 2.9386 -12.1195 0.2622 21 6 2.7205 -13.3194 2.0377 22 8 4.1297 -13.5419 2.1211 23 6 3.0084 -10.8378 1.9922 24 6 2.7401 -9.5634 1.1883 25 6 1.5227 -3.2575 0.7144 26 6 1.9348 -2.1578 1.4622 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5139 -0.8900 29 1 1.5615 2.4679 -1.2085 30 1 1.5879 2.4585 1.2242 31 1 2.5974 0.9235 2.4620 32 1 3.2034 -0.9286 4.1010 33 1 3.0612 -3.7833 4.2311 34 1 2.3392 -5.7057 2.9206 35 1 1.7711 -7.0711 1.8509 36 1 -0.1025 -8.0425 -0.0260 37 1 1.5218 -8.1540 -0.7455 38 1 -0.3983 -10.4778 0.0964 39 1 1.1621 -10.6739 -0.7372 40 1 0.4578 -11.7993 2.0114 41 1 0.5484 -12.7339 0.4991 42 1 2.3101 -13.2096 3.0415 43 1 2.2475 -14.1673 1.5424 44 1 4.3739 -14.3348 2.6178 45 1 2.5219 -10.7633 2.9647 46 1 4.0826 -10.9596 2.1313 47 1 3.2262 -9.6376 0.2156 48 1 3.1364 -8.7033 1.7280 49 1 1.0930 -3.1192 -0.2667 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14939082_13287722.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:25 Heat of formation + Delta-G solvation = -79.897262 kcal Electronic energy + Delta-G solvation = -29534.577081 eV Core-core repulsion = 25427.284423 eV Total energy + Delta-G solvation = -4107.292658 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.177 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.46459 -41.02820 -39.95777 -38.07673 -37.67347 -37.43010 -35.85237 -33.30642 -32.92280 -31.69737 -30.89233 -30.49701 -28.08113 -26.49488 -25.31807 -24.13557 -23.56263 -23.42780 -21.69010 -21.52643 -20.86636 -20.62848 -19.36049 -18.51566 -18.19736 -17.62388 -17.39504 -16.92576 -16.65003 -16.24094 -16.07740 -15.91124 -15.65788 -15.44672 -15.24839 -15.07347 -14.96232 -14.79878 -14.71279 -14.57884 -14.11308 -13.95949 -13.76667 -13.57530 -13.44613 -13.08535 -12.83698 -12.61820 -12.52678 -12.48723 -12.14410 -12.03820 -11.89850 -11.79731 -11.40095 -11.25205 -11.06195 -11.00122 -10.81267 -10.76700 -10.48326 -10.20035 -9.33357 -8.81910 -4.86863 -0.16075 0.19882 1.35126 1.51240 1.61275 1.83278 2.01394 2.09694 2.13676 2.88080 3.31460 3.51908 3.60169 3.64184 3.70956 3.74955 3.78315 3.84112 3.90563 4.09304 4.14557 4.18898 4.31249 4.36749 4.45373 4.46311 4.49584 4.51355 4.53974 4.59545 4.60296 4.67518 4.70545 4.77240 4.78790 4.83411 4.96694 5.00439 5.09618 5.16200 5.22632 5.24729 5.26447 5.30801 5.34262 5.38644 5.46668 5.49219 5.57168 5.57390 5.97967 6.48652 6.55646 6.61738 6.89711 7.16622 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.064 4.064 3 Si 0.789 3.211 4 C -0.217 4.217 5 C 0.082 3.918 6 N -0.571 5.571 7 C 0.112 3.888 8 C -0.124 4.124 9 C -0.067 4.067 10 C -0.178 4.178 11 C 0.557 3.443 12 O -0.591 6.591 13 N -0.709 5.709 14 C 0.124 3.876 15 C -0.086 4.086 16 H 0.093 0.907 17 C -0.112 4.112 18 C -0.106 4.106 19 C -0.091 4.091 20 H 0.060 0.940 21 C 0.076 3.924 22 O -0.596 6.596 23 C -0.105 4.105 24 C -0.113 4.113 25 C -0.022 4.022 26 C -0.127 4.127 27 H 0.384 0.616 28 H 0.099 0.901 29 H -0.311 1.311 30 H -0.258 1.258 31 H 0.210 0.790 32 H 0.439 0.561 33 H 0.162 0.838 34 H 0.159 0.841 35 H 0.414 0.586 36 H 0.059 0.941 37 H 0.054 0.946 38 H 0.073 0.927 39 H 0.060 0.940 40 H 0.075 0.925 41 H 0.069 0.931 42 H 0.056 0.944 43 H 0.050 0.950 44 H 0.395 0.605 45 H 0.071 0.929 46 H 0.056 0.944 47 H 0.053 0.947 48 H 0.072 0.928 49 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.449 -0.411 10.067 11.014 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.171 4.171 3 Si 0.691 3.309 4 C -0.224 4.224 5 C -0.046 4.046 6 N -0.174 5.174 7 C 0.002 3.998 8 C -0.144 4.144 9 C -0.087 4.087 10 C -0.183 4.183 11 C 0.347 3.653 12 O -0.473 6.473 13 N -0.362 5.362 14 C 0.001 3.999 15 C -0.105 4.105 16 H 0.111 0.889 17 C -0.150 4.150 18 C -0.144 4.144 19 C -0.109 4.109 20 H 0.078 0.922 21 C -0.001 4.001 22 O -0.405 6.405 23 C -0.142 4.142 24 C -0.151 4.151 25 C -0.042 4.042 26 C -0.132 4.132 27 H 0.233 0.767 28 H 0.117 0.883 29 H -0.239 1.239 30 H -0.183 1.183 31 H 0.226 0.774 32 H 0.280 0.720 33 H 0.180 0.820 34 H 0.176 0.824 35 H 0.253 0.747 36 H 0.078 0.922 37 H 0.073 0.927 38 H 0.091 0.909 39 H 0.078 0.922 40 H 0.094 0.906 41 H 0.088 0.912 42 H 0.074 0.926 43 H 0.068 0.932 44 H 0.244 0.756 45 H 0.089 0.911 46 H 0.074 0.926 47 H 0.071 0.929 48 H 0.091 0.909 49 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 4.061 0.759 8.541 9.487 hybrid contribution -1.044 -0.877 0.772 1.566 sum 3.018 -0.119 9.312 9.790 Atomic orbital electron populations 1.86600 1.19406 1.80635 1.49907 1.24786 0.82729 1.12513 0.97113 0.94080 0.89610 0.69939 0.77259 1.20760 1.11216 0.91457 0.98971 1.22173 0.98424 0.95719 0.88251 1.41757 1.53767 1.03140 1.18748 1.18624 0.99719 0.87873 0.93587 1.20060 1.04273 0.87966 1.02137 1.20867 0.96021 1.00213 0.91606 1.19573 1.09083 0.92159 0.97457 1.18534 0.77407 0.84137 0.85266 1.90765 1.47166 1.86897 1.22500 1.45767 1.64006 1.04851 1.21571 1.21431 0.99628 0.84137 0.94710 1.21346 0.96863 0.92476 0.99827 0.88923 1.21481 1.01317 0.93421 0.98741 1.21457 0.94073 0.97706 1.01155 1.21186 0.96569 0.94162 0.99026 0.92167 1.22309 0.81256 0.97106 0.99470 1.86435 1.23924 1.50975 1.79120 1.21461 1.00732 0.93305 0.98711 1.21613 0.94896 0.98108 1.00454 1.20592 0.94459 0.90763 0.98381 1.19185 1.05085 0.93512 0.95400 0.76698 0.88313 1.23945 1.18336 0.77377 0.71975 0.82004 0.82371 0.74743 0.92244 0.92745 0.90857 0.92162 0.90630 0.91182 0.92594 0.93153 0.75579 0.91071 0.92557 0.92857 0.90937 0.87561 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -4.12 12.88 -148.98 -1.92 -6.03 16 2 C -0.06 -0.20 3.06 71.24 0.22 0.02 16 3 Si 0.79 -2.12 30.82 68.60 2.11 0.00 16 4 C -0.22 -0.48 5.58 -18.61 -0.10 -0.58 16 5 C 0.08 -0.40 10.43 82.98 0.87 0.47 16 6 N -0.57 3.33 6.05 -187.48 -1.13 2.20 16 7 C 0.11 0.04 7.27 39.19 0.28 0.33 16 8 C -0.12 0.35 10.00 22.09 0.22 0.57 16 9 C -0.07 0.06 9.46 22.30 0.21 0.27 16 10 C -0.18 -1.30 5.87 -20.09 -0.12 -1.42 16 11 C 0.56 5.85 7.76 86.73 0.67 6.53 16 12 O -0.59 -11.95 16.33 -3.97 -0.06 -12.02 16 13 N -0.71 -1.61 5.23 -466.16 -2.44 -4.05 16 14 C 0.12 0.29 5.06 86.38 0.44 0.73 16 15 C -0.09 0.27 2.22 -10.79 -0.02 0.24 16 16 H 0.09 -0.50 8.14 -2.39 -0.02 -0.51 16 17 C -0.11 0.30 5.20 30.59 0.16 0.46 16 18 C -0.11 0.40 5.20 30.60 0.16 0.56 16 19 C -0.09 0.11 2.43 -10.80 -0.03 0.08 16 20 H 0.06 0.14 8.14 -2.39 -0.02 0.13 16 21 C 0.08 -0.15 6.43 71.98 0.46 0.32 16 22 O -0.60 -0.62 13.20 -148.98 -1.97 -2.59 16 23 C -0.10 0.18 5.10 30.61 0.16 0.34 16 24 C -0.11 0.28 5.08 30.61 0.16 0.43 16 25 C -0.02 -0.24 9.64 22.74 0.22 -0.02 16 26 C -0.13 -0.83 6.34 -20.21 -0.13 -0.95 16 27 H 0.38 0.04 8.70 -74.06 -0.64 -0.60 16 28 H 0.10 0.52 7.96 -2.38 -0.02 0.50 16 29 H -0.31 -2.04 7.11 99.48 0.71 -1.34 16 30 H -0.26 0.75 7.00 99.48 0.70 1.44 16 31 H 0.21 -2.50 6.27 -2.91 -0.02 -2.52 16 32 H 0.44 -5.69 8.96 -92.71 -0.83 -6.52 16 33 H 0.16 -1.59 8.06 -2.91 -0.02 -1.61 16 34 H 0.16 -1.29 6.36 -2.91 -0.02 -1.31 16 35 H 0.41 -1.86 5.66 -92.71 -0.52 -2.39 16 36 H 0.06 0.28 8.14 -2.39 -0.02 0.27 16 37 H 0.05 0.31 8.14 -2.39 -0.02 0.29 16 38 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 39 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 40 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 41 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 42 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 43 H 0.05 -0.16 8.14 -2.39 -0.02 -0.18 16 44 H 0.39 -2.83 9.12 -74.06 -0.68 -3.50 16 45 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 46 H 0.06 0.09 7.82 -2.39 -0.02 0.07 16 47 H 0.05 0.04 8.14 -2.39 -0.02 0.02 16 48 H 0.07 -0.33 7.18 -2.39 -0.02 -0.34 16 49 H 0.11 1.69 7.64 -2.91 -0.02 1.67 16 Total: 0.00 -28.92 392.21 -3.23 -32.15 By element: Atomic # 1 Polarization: -16.38 SS G_CDS: -1.64 Total: -18.03 kcal Atomic # 6 Polarization: 4.54 SS G_CDS: 3.82 Total: 8.37 kcal Atomic # 7 Polarization: 1.72 SS G_CDS: -3.57 Total: -1.86 kcal Atomic # 8 Polarization: -16.69 SS G_CDS: -3.95 Total: -20.64 kcal Atomic # 14 Polarization: -2.12 SS G_CDS: 2.11 Total: 0.00 kcal Total: -28.92 -3.23 -32.15 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_13287722.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.744 kcal (2) G-P(sol) polarization free energy of solvation -28.924 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.668 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.229 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.153 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.897 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds