Wall clock time and date at job start Tue Mar 9 2021 13:00:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.38580 * 120.32694 * 65.00252 * 4 2 1 6 6 C 1.38621 * 118.49101 * 179.97438 * 5 4 2 7 7 C 1.39278 * 119.06039 * 0.02562 * 6 5 4 8 8 C 1.48168 * 119.72146 * 179.97438 * 7 6 5 9 9 O 1.21519 * 120.00049 * 359.97438 * 8 7 6 10 10 N 1.34771 * 119.99923 * 179.97438 * 8 7 6 11 11 C 1.46497 * 120.00353 * 180.02562 * 10 8 7 12 12 C 1.53001 * 109.47410 * 179.97438 * 11 10 8 13 13 H 1.08994 * 109.46955 * 304.99952 * 12 11 10 14 14 C 1.53002 * 109.46937 * 65.00051 * 12 11 10 15 15 C 1.53005 * 109.47071 * 180.02562 * 14 12 11 16 16 C 1.53001 * 109.46757 * 299.99502 * 15 14 12 17 17 H 1.08999 * 109.47011 * 300.00183 * 16 15 14 18 18 C 1.53001 * 109.47111 * 180.02562 * 16 15 14 19 19 O 1.42897 * 109.46793 * 65.00095 * 18 16 15 20 20 C 1.53003 * 109.46998 * 59.99853 * 16 15 14 21 21 C 1.52994 * 109.47586 * 300.00046 * 20 16 15 22 22 N 1.32741 * 120.55068 * 359.97438 * 7 6 5 23 23 C 1.31493 * 121.64839 * 359.73185 * 22 7 6 24 24 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 25 25 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 26 26 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 27 27 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 28 28 H 1.08008 * 120.75521 * 359.95490 * 5 4 2 29 29 H 1.08001 * 120.47365 * 179.97438 * 6 5 4 30 30 H 0.97006 * 119.99713 * 359.97438 * 10 8 7 31 31 H 1.09004 * 109.46876 * 299.99515 * 11 10 8 32 32 H 1.08994 * 109.47231 * 59.99189 * 11 10 8 33 33 H 1.09007 * 109.46668 * 299.99693 * 14 12 11 34 34 H 1.08999 * 109.47460 * 59.99700 * 14 12 11 35 35 H 1.08996 * 109.46937 * 179.97438 * 15 14 12 36 36 H 1.08999 * 109.46772 * 59.99480 * 15 14 12 37 37 H 1.09000 * 109.46535 * 185.00047 * 18 16 15 38 38 H 1.09000 * 109.46764 * 304.99621 * 18 16 15 39 39 H 0.96704 * 113.99583 * 180.02562 * 19 18 16 40 40 H 1.08996 * 109.47155 * 179.97438 * 20 16 15 41 41 H 1.08999 * 109.46970 * 60.00305 * 20 16 15 42 42 H 1.08999 * 109.47178 * 300.00132 * 21 20 16 43 43 H 1.08993 * 109.47533 * 179.97438 * 21 20 16 44 44 H 1.07995 * 119.55534 * 180.28816 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 1.6878 -2.0634 1.4058 6 6 2.1676 -2.6786 2.5516 7 6 2.8734 -1.9196 3.4821 8 6 3.3924 -2.5622 4.7122 9 8 3.2012 -3.7465 4.9061 10 7 4.0765 -1.8332 5.6160 11 6 4.5901 -2.4685 6.8320 12 6 5.3230 -1.4277 7.6808 13 1 6.0966 -0.9489 7.0806 14 6 4.3271 -0.3721 8.1654 15 6 5.0600 0.6692 9.0137 16 6 5.7031 -0.0172 10.2204 17 1 4.9296 -0.4960 10.8209 18 6 6.4355 1.0240 11.0691 19 8 5.4885 1.9432 11.6172 20 6 6.6989 -1.0730 9.7358 21 6 5.9660 -2.1141 8.8875 22 7 3.0849 -0.6255 3.2760 23 6 2.6460 -0.0181 2.1955 24 1 -0.3934 0.4418 0.7650 25 1 1.7924 -0.5139 -0.8899 26 1 3.5346 1.7702 0.0322 27 1 1.5616 2.4678 -1.2086 28 1 1.1365 -2.6256 0.6666 29 1 1.9960 -3.7313 2.7209 30 1 4.2294 -0.8879 5.4610 31 1 3.7600 -2.8843 7.4031 32 1 5.2805 -3.2671 6.5608 33 1 3.8693 0.1173 7.3056 34 1 3.5534 -0.8508 8.7656 35 1 4.3506 1.4214 9.3585 36 1 5.8335 1.1479 8.4131 37 1 6.9671 0.5240 11.8787 38 1 7.1479 1.5646 10.4459 39 1 5.8835 2.6332 12.1677 40 1 7.1573 -1.5617 10.5955 41 1 7.4724 -0.5942 9.1353 42 1 5.1925 -2.5928 9.4880 43 1 6.6755 -2.8659 8.5420 44 1 2.8413 1.0353 2.0600 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_13287726.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:29 Heat of formation + Delta-G solvation = -99.213153 kcal Electronic energy + Delta-G solvation = -24871.767012 eV Core-core repulsion = 21175.626654 eV Total energy + Delta-G solvation = -3696.140358 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.162 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.85887 -40.59025 -39.76048 -37.98291 -37.62515 -35.79561 -33.96514 -33.03599 -32.59590 -31.77063 -28.73063 -27.34868 -25.11464 -24.86548 -23.91008 -23.40210 -21.72556 -21.68595 -20.82022 -19.24241 -18.65645 -18.23916 -17.78208 -16.83389 -16.64483 -16.58336 -16.47443 -16.07320 -16.01637 -15.84720 -15.31240 -15.11629 -14.82126 -14.75814 -14.48463 -14.39707 -14.20484 -13.88004 -13.60969 -13.44459 -13.15951 -12.87189 -12.65549 -12.55360 -12.18384 -12.12089 -11.95249 -11.47080 -11.36886 -11.16602 -11.11973 -11.08335 -10.83921 -10.68813 -10.62915 -10.33279 -10.00880 -5.18954 -0.57340 0.04481 1.08839 1.48385 1.66325 1.84178 2.05055 2.70794 2.94732 3.18508 3.24786 3.42062 3.56991 3.62363 3.67110 3.70097 3.74763 3.91300 4.03225 4.11622 4.14745 4.23245 4.28710 4.37872 4.42124 4.44661 4.51693 4.52285 4.58704 4.63917 4.72182 4.75974 4.85380 4.90325 4.95242 5.01383 5.09697 5.14781 5.19163 5.25535 5.34076 5.39246 5.42665 5.50804 6.33345 6.37554 6.63630 6.67052 7.16810 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.067 4.067 3 Si 0.686 3.314 4 C -0.151 4.151 5 C -0.053 4.053 6 C -0.108 4.108 7 C 0.082 3.918 8 C 0.570 3.430 9 O -0.530 6.530 10 N -0.708 5.708 11 C 0.121 3.879 12 C -0.100 4.100 13 H 0.079 0.921 14 C -0.116 4.116 15 C -0.110 4.110 16 C -0.089 4.089 17 H 0.078 0.922 18 C 0.078 3.922 19 O -0.573 6.573 20 C -0.112 4.112 21 C -0.110 4.110 22 N -0.453 5.453 23 C 0.105 3.895 24 H 0.381 0.619 25 H 0.120 0.880 26 H -0.253 1.253 27 H -0.249 1.249 28 H 0.147 0.853 29 H 0.153 0.847 30 H 0.412 0.588 31 H 0.072 0.928 32 H 0.071 0.929 33 H 0.064 0.936 34 H 0.066 0.934 35 H 0.071 0.929 36 H 0.060 0.940 37 H 0.045 0.955 38 H 0.045 0.955 39 H 0.380 0.620 40 H 0.066 0.934 41 H 0.065 0.935 42 H 0.068 0.932 43 H 0.069 0.931 44 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.565 3.990 1.435 4.520 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.178 4.178 3 Si 0.587 3.413 4 C -0.154 4.154 5 C -0.079 4.079 6 C -0.129 4.129 7 C -0.056 4.056 8 C 0.355 3.645 9 O -0.406 6.406 10 N -0.360 5.360 11 C -0.003 4.003 12 C -0.118 4.118 13 H 0.097 0.903 14 C -0.154 4.154 15 C -0.147 4.147 16 C -0.107 4.107 17 H 0.096 0.904 18 C 0.000 4.000 19 O -0.379 6.379 20 C -0.150 4.150 21 C -0.148 4.148 22 N -0.164 5.164 23 C -0.055 4.055 24 H 0.229 0.771 25 H 0.137 0.863 26 H -0.177 1.177 27 H -0.173 1.173 28 H 0.165 0.835 29 H 0.170 0.830 30 H 0.248 0.752 31 H 0.090 0.910 32 H 0.089 0.911 33 H 0.083 0.917 34 H 0.084 0.916 35 H 0.090 0.910 36 H 0.079 0.921 37 H 0.063 0.937 38 H 0.063 0.937 39 H 0.227 0.773 40 H 0.085 0.915 41 H 0.084 0.916 42 H 0.087 0.913 43 H 0.087 0.913 44 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 2.074 3.475 0.952 4.157 hybrid contribution 0.165 -0.291 -0.595 0.682 sum 2.240 3.184 0.357 3.909 Atomic orbital electron populations 1.86541 1.16573 1.81669 1.49336 1.25049 0.85601 1.10430 0.96725 0.94813 0.81258 0.77290 0.87953 1.21655 0.99520 0.95867 0.98313 1.21560 0.95826 0.93737 0.96734 1.22233 0.95352 1.02327 0.92980 1.21180 0.98442 0.90219 0.95802 1.17843 0.78405 0.85949 0.82320 1.90823 1.57996 1.14832 1.76915 1.45844 1.55254 1.14077 1.20860 1.21521 0.98523 0.95574 0.84641 1.21440 0.98008 0.95895 0.96490 0.90280 1.21637 0.97725 0.96307 0.99718 1.21510 0.99892 0.97722 0.95580 1.21176 0.98212 0.94987 0.96344 0.90380 1.22245 0.90898 0.90834 0.95986 1.86475 1.36994 1.44320 1.70102 1.21498 0.97662 0.96126 0.99703 1.21466 0.99902 0.97661 0.95750 1.67504 1.18222 1.09503 1.21205 1.22596 0.94267 0.99719 0.88912 0.77125 0.86260 1.17711 1.17336 0.83491 0.82966 0.75161 0.90963 0.91050 0.91710 0.91561 0.91032 0.92110 0.93710 0.93687 0.77327 0.91483 0.91620 0.91303 0.91256 0.81927 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.68 12.84 -35.23 -0.45 0.23 16 2 C -0.07 0.12 2.82 36.01 0.10 0.22 16 3 Si 0.69 -1.77 29.83 -169.99 -5.07 -6.84 16 4 C -0.15 0.16 5.37 -104.36 -0.56 -0.40 16 5 C -0.05 0.02 9.83 -39.31 -0.39 -0.37 16 6 C -0.11 -0.12 9.63 -39.05 -0.38 -0.49 16 7 C 0.08 0.17 6.75 -83.01 -0.56 -0.40 16 8 C 0.57 1.84 7.81 -12.18 -0.10 1.74 16 9 O -0.53 -3.30 16.32 5.35 0.09 -3.21 16 10 N -0.71 -0.58 5.27 -61.15 -0.32 -0.90 16 11 C 0.12 0.01 5.07 -4.04 -0.02 -0.01 16 12 C -0.10 0.16 2.22 -90.62 -0.20 -0.04 16 13 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 14 C -0.12 0.13 5.08 -26.73 -0.14 0.00 16 15 C -0.11 0.07 5.10 -26.73 -0.14 -0.07 16 16 C -0.09 0.06 2.43 -90.62 -0.22 -0.16 16 17 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 18 C 0.08 -0.06 6.43 37.16 0.24 0.18 16 19 O -0.57 -0.27 13.19 -35.23 -0.46 -0.74 16 20 C -0.11 0.20 5.20 -26.73 -0.14 0.06 16 21 C -0.11 0.19 5.20 -26.73 -0.14 0.05 16 22 N -0.45 -0.43 9.54 -9.80 -0.09 -0.53 16 23 C 0.10 -0.09 9.84 -17.56 -0.17 -0.26 16 24 H 0.38 -1.92 8.70 45.56 0.40 -1.52 16 25 H 0.12 -0.20 7.96 -51.93 -0.41 -0.61 16 26 H -0.25 0.07 7.11 56.52 0.40 0.47 16 27 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 28 H 0.15 -0.26 8.06 -52.48 -0.42 -0.68 16 29 H 0.15 0.12 7.64 -52.49 -0.40 -0.28 16 30 H 0.41 -0.20 6.98 -40.82 -0.29 -0.48 16 31 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 32 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 33 H 0.06 -0.08 7.18 -51.93 -0.37 -0.45 16 34 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 35 H 0.07 0.06 7.82 -51.93 -0.41 -0.35 16 36 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 39 H 0.38 -1.35 9.12 45.56 0.42 -0.93 16 40 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 41 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 42 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 43 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 44 H 0.16 -0.55 4.92 -52.49 -0.26 -0.81 16 LS Contribution 356.08 15.07 5.37 5.37 Total: 0.00 -8.02 356.08 -9.77 -17.79 By element: Atomic # 1 Polarization: -5.19 SS G_CDS: -6.02 Total: -11.21 kcal Atomic # 6 Polarization: 2.85 SS G_CDS: -2.80 Total: 0.05 kcal Atomic # 7 Polarization: -1.01 SS G_CDS: -0.42 Total: -1.43 kcal Atomic # 8 Polarization: -2.89 SS G_CDS: -0.83 Total: -3.72 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: -5.07 Total: -6.84 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -8.02 -9.77 -17.79 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_13287726.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.419 kcal (2) G-P(sol) polarization free energy of solvation -8.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.442 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.771 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.794 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.213 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds