Wall clock time and date at job start Tue Mar 9 2021 13:01:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46875 * 2 1 4 4 C 1.50698 * 109.46831 * 119.99719 * 2 1 3 5 5 C 1.31108 * 118.54814 * 249.97719 * 4 2 1 6 6 N 1.38927 * 121.85134 * 180.42912 * 5 4 2 7 7 C 1.47029 * 118.88385 * 346.69001 * 6 5 4 8 8 C 1.53543 * 107.65699 * 43.65936 * 7 6 5 9 9 C 1.50205 * 118.54502 * 70.00526 * 4 2 1 10 10 C 1.50698 * 109.33051 * 39.66254 * 9 4 2 11 11 O 1.21279 * 119.99961 * 120.86740 * 10 9 4 12 12 N 1.34777 * 119.99836 * 300.86239 * 10 9 4 13 13 C 1.46498 * 119.99649 * 180.02562 * 12 10 9 14 14 C 1.53006 * 109.47099 * 180.02562 * 13 12 10 15 15 H 1.09000 * 109.46866 * 304.99967 * 14 13 12 16 16 C 1.52997 * 109.46974 * 64.99742 * 14 13 12 17 17 C 1.52996 * 109.47165 * 180.02562 * 16 14 13 18 18 C 1.53002 * 109.46972 * 300.00293 * 17 16 14 19 19 H 1.09000 * 109.46986 * 299.99742 * 18 17 16 20 20 C 1.52996 * 109.47346 * 179.97438 * 18 17 16 21 21 O 1.42903 * 109.47094 * 64.99836 * 20 18 17 22 22 C 1.52997 * 109.47415 * 59.99860 * 18 17 16 23 23 C 1.52999 * 109.47000 * 185.00152 * 14 13 12 24 24 H 0.96700 * 114.00189 * 299.99939 * 1 2 3 25 25 H 1.08995 * 109.47192 * 239.99582 * 2 1 3 26 26 H 1.48498 * 110.00162 * 299.99817 * 3 2 1 27 27 H 1.48494 * 109.99964 * 61.31886 * 3 2 1 28 28 H 1.08006 * 119.07740 * 0.42944 * 5 4 2 29 29 H 0.96999 * 120.56454 * 166.65966 * 6 5 4 30 30 H 1.09007 * 109.82103 * 284.12240 * 7 6 5 31 31 H 1.08993 * 109.87933 * 163.22950 * 7 6 5 32 32 H 1.09007 * 109.62145 * 179.32813 * 8 7 6 33 33 H 1.08997 * 109.77794 * 58.86888 * 8 7 6 34 34 H 1.09001 * 109.19005 * 280.09189 * 9 4 2 35 35 H 0.96998 * 120.00041 * 359.97438 * 12 10 9 36 36 H 1.09006 * 109.47554 * 59.99901 * 13 12 10 37 37 H 1.08998 * 109.47209 * 300.00061 * 13 12 10 38 38 H 1.09000 * 109.47140 * 60.00393 * 16 14 13 39 39 H 1.09001 * 109.47375 * 300.00376 * 16 14 13 40 40 H 1.08992 * 109.47534 * 180.02562 * 17 16 14 41 41 H 1.08996 * 109.47134 * 59.99508 * 17 16 14 42 42 H 1.08998 * 109.47622 * 184.99440 * 20 18 17 43 43 H 1.09001 * 109.47244 * 305.00138 * 20 18 17 44 44 H 0.96699 * 114.00071 * 180.02562 * 21 20 18 45 45 H 1.09001 * 109.46922 * 180.02562 * 22 18 17 46 46 H 1.09000 * 109.47140 * 59.99976 * 22 18 17 47 47 H 1.08993 * 109.47839 * 60.00073 * 23 14 13 48 48 H 1.09000 * 109.47160 * 299.99635 * 23 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.5119 -0.0029 2.1693 6 7 3.0078 -0.5881 3.3275 7 6 2.6238 -1.9715 3.6448 8 6 2.7181 -2.7898 2.3491 9 6 1.7451 -2.1977 1.3269 10 6 1.9983 -2.8206 -0.0218 11 8 2.8697 -3.6542 -0.1508 12 7 1.2563 -2.4512 -1.0846 13 6 1.5021 -3.0572 -2.3956 14 6 0.5314 -2.4668 -3.4204 15 1 -0.4918 -2.5949 -3.0673 16 6 0.8255 -0.9763 -3.6017 17 6 -0.1455 -0.3858 -4.6260 18 6 0.0254 -1.1061 -5.9650 19 1 1.0485 -0.9780 -6.3184 20 6 -0.9461 -0.5160 -6.9892 21 8 -0.5986 0.8462 -7.2456 22 6 -0.2687 -2.5965 -5.7837 23 6 0.7029 -3.1872 -4.7592 24 1 -0.3933 0.4417 0.7650 25 1 1.7923 -0.5139 -0.8899 26 1 1.5614 2.4679 -1.2085 27 1 1.5878 2.4585 1.2242 28 1 2.6073 1.0650 2.0385 29 1 3.5978 -0.0927 3.9169 30 1 1.6015 -1.9939 4.0225 31 1 3.3027 -2.3826 4.3918 32 1 2.4506 -3.8271 2.5509 33 1 3.7340 -2.7437 1.9568 34 1 0.7221 -2.4114 1.6367 35 1 0.5591 -1.7848 -0.9813 36 1 1.3523 -4.1350 -2.3316 37 1 2.5266 -2.8505 -2.7050 38 1 1.8488 -0.8483 -3.9548 39 1 0.7034 -0.4632 -2.6479 40 1 0.0643 0.6759 -4.7556 41 1 -1.1686 -0.5139 -4.2726 42 1 -0.8876 -1.0865 -7.9161 43 1 -1.9617 -0.5641 -6.5963 44 1 -1.1740 1.2849 -7.8870 45 1 -0.1465 -3.1096 -6.7376 46 1 -1.2919 -2.7246 -5.4302 47 1 0.4934 -4.2489 -4.6301 48 1 1.7262 -3.0591 -5.1123 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_15608500.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:17 Heat of formation + Delta-G solvation = -109.613458 kcal Electronic energy + Delta-G solvation = -27822.285734 eV Core-core repulsion = 24071.071428 eV Total energy + Delta-G solvation = -3751.214306 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.193 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.51971 -40.15732 -39.09406 -37.89200 -37.48168 -35.55546 -33.65530 -32.79750 -32.41031 -31.69951 -28.35967 -27.20774 -25.92162 -24.29786 -23.74970 -23.20145 -21.60650 -21.47928 -20.73008 -19.41299 -19.00282 -18.21172 -17.96865 -17.36790 -17.04336 -16.54564 -16.25818 -15.92965 -15.89025 -15.60713 -15.35961 -15.02959 -14.93730 -14.73544 -14.56406 -14.42603 -14.11397 -13.97425 -13.59387 -13.30331 -13.18044 -13.03553 -12.80393 -12.67183 -12.45931 -12.23074 -12.05562 -11.93927 -11.85713 -11.60444 -11.43070 -11.39708 -11.13553 -11.04697 -10.78500 -10.54065 -10.45226 -9.73118 -8.54539 -4.95875 1.19820 1.30243 1.53366 1.93213 1.97501 2.44442 2.52582 3.23012 3.32146 3.64745 3.66497 3.74713 3.78149 3.79545 3.98687 4.11736 4.19974 4.24664 4.26152 4.29103 4.38810 4.44132 4.47637 4.52431 4.53428 4.59090 4.63543 4.67744 4.70244 4.73575 4.79309 4.82758 4.93798 4.97675 5.07731 5.17186 5.18657 5.21083 5.27426 5.31941 5.35132 5.38752 5.47383 5.54797 5.68409 6.20597 6.42155 6.70410 6.74759 6.78117 7.48613 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.076 4.076 3 Si 0.669 3.331 4 C -0.280 4.280 5 C 0.154 3.846 6 N -0.747 5.747 7 C 0.119 3.881 8 C -0.120 4.120 9 C -0.037 4.037 10 C 0.524 3.476 11 O -0.543 6.543 12 N -0.731 5.731 13 C 0.118 3.882 14 C -0.099 4.099 15 H 0.077 0.923 16 C -0.120 4.120 17 C -0.108 4.108 18 C -0.088 4.088 19 H 0.078 0.922 20 C 0.078 3.922 21 O -0.573 6.573 22 C -0.112 4.112 23 C -0.110 4.110 24 H 0.378 0.622 25 H 0.125 0.875 26 H -0.255 1.255 27 H -0.261 1.261 28 H 0.134 0.866 29 H 0.404 0.596 30 H 0.061 0.939 31 H 0.083 0.917 32 H 0.080 0.920 33 H 0.082 0.918 34 H 0.094 0.906 35 H 0.414 0.586 36 H 0.066 0.934 37 H 0.069 0.931 38 H 0.065 0.935 39 H 0.067 0.933 40 H 0.069 0.931 41 H 0.060 0.940 42 H 0.045 0.955 43 H 0.044 0.956 44 H 0.379 0.621 45 H 0.066 0.934 46 H 0.064 0.936 47 H 0.068 0.932 48 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.207 1.875 1.542 2.711 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.187 4.187 3 Si 0.572 3.428 4 C -0.291 4.291 5 C 0.031 3.969 6 N -0.377 5.377 7 C -0.005 4.005 8 C -0.159 4.159 9 C -0.058 4.058 10 C 0.310 3.690 11 O -0.420 6.420 12 N -0.389 5.389 13 C -0.006 4.006 14 C -0.117 4.117 15 H 0.095 0.905 16 C -0.157 4.157 17 C -0.146 4.146 18 C -0.107 4.107 19 H 0.096 0.904 20 C 0.000 4.000 21 O -0.379 6.379 22 C -0.150 4.150 23 C -0.148 4.148 24 H 0.226 0.774 25 H 0.143 0.857 26 H -0.180 1.180 27 H -0.187 1.187 28 H 0.150 0.850 29 H 0.238 0.762 30 H 0.079 0.921 31 H 0.102 0.898 32 H 0.098 0.902 33 H 0.101 0.899 34 H 0.112 0.888 35 H 0.254 0.746 36 H 0.085 0.915 37 H 0.087 0.913 38 H 0.084 0.916 39 H 0.086 0.914 40 H 0.088 0.912 41 H 0.078 0.922 42 H 0.063 0.937 43 H 0.063 0.937 44 H 0.226 0.774 45 H 0.085 0.915 46 H 0.083 0.917 47 H 0.087 0.913 48 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -0.306 1.531 1.351 2.064 hybrid contribution -1.763 0.448 0.345 1.851 sum -2.068 1.979 1.696 3.327 Atomic orbital electron populations 1.86415 1.18564 1.79986 1.49763 1.25156 0.83533 1.10330 0.99694 0.95048 0.92241 0.75400 0.80152 1.20470 1.15756 0.94099 0.98787 1.20514 0.93447 0.96427 0.86469 1.44598 1.54093 1.14606 1.24361 1.21649 1.00474 0.81507 0.96873 1.21730 1.00760 0.99153 0.94269 1.19660 1.01120 0.92318 0.92715 1.20508 0.81040 0.81504 0.85911 1.90697 1.32648 1.33172 1.85456 1.46645 1.38759 1.44771 1.08689 1.21440 0.99459 0.97700 0.81953 1.21417 0.99615 0.95724 0.94984 0.90505 1.21695 0.99958 0.94513 0.99555 1.21489 0.99358 1.00032 0.93709 1.21177 1.00011 0.94458 0.95034 0.90369 1.22250 0.97516 0.82541 0.97646 1.86479 1.59484 1.25439 1.66460 1.21509 0.99784 0.94344 0.99334 1.21478 1.00133 0.99385 0.93756 0.77399 0.85738 1.17963 1.18697 0.84953 0.76197 0.92107 0.89819 0.90175 0.89916 0.88846 0.74575 0.91546 0.91306 0.91596 0.91431 0.91185 0.92173 0.93714 0.93730 0.77395 0.91542 0.91678 0.91346 0.91341 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.35 11.40 -35.23 -0.40 -0.05 16 2 C -0.08 0.04 1.53 36.00 0.06 0.09 16 3 Si 0.67 -0.62 29.97 -169.99 -5.09 -5.71 16 4 C -0.28 0.06 5.03 -101.34 -0.51 -0.45 16 5 C 0.15 -0.17 9.61 -16.08 -0.15 -0.33 16 6 N -0.75 1.38 5.83 -60.68 -0.35 1.03 16 7 C 0.12 -0.20 7.16 -3.47 -0.02 -0.23 16 8 C -0.12 -0.07 4.91 -26.43 -0.13 -0.20 16 9 C -0.04 -0.04 2.75 -93.14 -0.26 -0.29 16 10 C 0.52 1.76 6.85 -10.99 -0.08 1.68 16 11 O -0.54 -3.76 15.80 5.56 0.09 -3.67 16 12 N -0.73 -1.17 3.59 -60.29 -0.22 -1.38 16 13 C 0.12 0.15 5.06 -4.04 -0.02 0.13 16 14 C -0.10 0.02 2.22 -90.62 -0.20 -0.18 16 15 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 16 C -0.12 -0.03 5.08 -26.73 -0.14 -0.16 16 17 C -0.11 -0.08 5.10 -26.73 -0.14 -0.22 16 18 C -0.09 -0.02 2.43 -90.62 -0.22 -0.24 16 19 H 0.08 0.10 8.14 -51.93 -0.42 -0.33 16 20 C 0.08 0.00 6.43 37.16 0.24 0.24 16 21 O -0.57 -0.70 13.19 -35.23 -0.46 -1.17 16 22 C -0.11 0.10 5.20 -26.71 -0.14 -0.04 16 23 C -0.11 0.08 5.21 -26.70 -0.14 -0.06 16 24 H 0.38 -1.18 8.70 45.56 0.40 -0.78 16 25 H 0.13 0.04 4.16 -51.93 -0.22 -0.18 16 26 H -0.25 -0.63 7.11 56.52 0.40 -0.23 16 27 H -0.26 -0.10 6.82 56.52 0.39 0.29 16 28 H 0.13 -0.32 4.31 -52.48 -0.23 -0.55 16 29 H 0.40 -1.49 8.96 -40.82 -0.37 -1.86 16 30 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 32 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 33 H 0.08 0.20 7.76 -51.93 -0.40 -0.20 16 34 H 0.09 0.04 8.14 -51.93 -0.42 -0.39 16 35 H 0.41 0.33 4.23 -40.82 -0.17 0.16 16 36 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 37 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 38 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 39 H 0.07 0.04 5.90 -51.93 -0.31 -0.26 16 40 H 0.07 0.15 7.82 -51.93 -0.41 -0.25 16 41 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 42 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 43 H 0.04 -0.03 8.14 -51.93 -0.42 -0.45 16 44 H 0.38 -1.08 9.12 45.56 0.42 -0.67 16 45 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 46 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 47 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 48 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 LS Contribution 359.51 15.07 5.42 5.42 Total: 0.00 -7.11 359.51 -10.14 -17.24 By element: Atomic # 1 Polarization: -4.20 SS G_CDS: -7.26 Total: -11.46 kcal Atomic # 6 Polarization: 1.60 SS G_CDS: -1.85 Total: -0.25 kcal Atomic # 7 Polarization: 0.22 SS G_CDS: -0.57 Total: -0.35 kcal Atomic # 8 Polarization: -4.11 SS G_CDS: -0.78 Total: -4.89 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.09 Total: -5.71 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -7.11 -10.14 -17.24 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_15608500.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.369 kcal (2) G-P(sol) polarization free energy of solvation -7.110 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.478 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.135 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.245 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds