Wall clock time and date at job start Tue Mar 9 2021 13:02:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86298 * 109.47110 * 2 1 4 4 C 1.50700 * 109.47161 * 119.99807 * 2 1 3 5 5 C 1.38241 * 119.94341 * 245.30549 * 4 2 1 6 6 C 1.38187 * 120.07241 * 180.30208 * 5 4 2 7 7 C 1.38678 * 119.94995 * 359.41254 * 6 5 4 8 8 O 1.35920 * 120.05638 * 180.30423 * 7 6 5 9 9 C 1.42902 * 116.99942 * 0.02562 * 8 7 6 10 10 C 1.50702 * 109.47130 * 180.02562 * 9 8 7 11 11 O 1.21284 * 119.99867 * 359.97438 * 10 9 8 12 12 N 1.34775 * 120.00117 * 180.02562 * 10 9 8 13 13 C 1.46496 * 120.00078 * 179.97438 * 12 10 9 14 14 C 1.53009 * 109.47378 * 179.97438 * 13 12 10 15 15 H 1.08996 * 109.46700 * 54.99865 * 14 13 12 16 16 C 1.52994 * 109.47350 * 174.99920 * 14 13 12 17 17 C 1.52999 * 109.46963 * 180.02562 * 16 14 13 18 18 C 1.52997 * 109.47277 * 299.99860 * 17 16 14 19 19 H 1.09007 * 109.47387 * 300.00460 * 18 17 16 20 20 C 1.52999 * 109.47277 * 180.02562 * 18 17 16 21 21 O 1.42900 * 109.46936 * 175.00247 * 20 18 17 22 22 C 1.53007 * 109.46870 * 59.99995 * 18 17 16 23 23 C 1.52998 * 109.46725 * 295.00296 * 14 13 12 24 24 C 1.38830 * 119.88648 * 0.28289 * 7 6 5 25 25 Br 1.89099 * 120.03757 * 180.02562 * 24 7 6 26 26 C 1.38193 * 119.92568 * 359.97438 * 24 7 6 27 27 H 0.96702 * 114.00482 * 300.00494 * 1 2 3 28 28 H 1.09001 * 109.47313 * 239.99558 * 2 1 3 29 29 H 1.48502 * 110.00033 * 299.99738 * 3 2 1 30 30 H 1.48503 * 110.00206 * 61.31816 * 3 2 1 31 31 H 1.08005 * 119.96437 * 359.97438 * 5 4 2 32 32 H 1.08002 * 120.02659 * 179.69754 * 6 5 4 33 33 H 1.08998 * 109.47006 * 299.99801 * 9 8 7 34 34 H 1.08995 * 109.47328 * 59.99901 * 9 8 7 35 35 H 0.97003 * 119.99935 * 359.97438 * 12 10 9 36 36 H 1.09003 * 109.47454 * 299.99935 * 13 12 10 37 37 H 1.09003 * 109.46967 * 60.00019 * 13 12 10 38 38 H 1.09001 * 109.47400 * 300.00125 * 16 14 13 39 39 H 1.09007 * 109.46807 * 60.00129 * 16 14 13 40 40 H 1.08990 * 109.47011 * 60.00495 * 17 16 14 41 41 H 1.09004 * 109.46602 * 180.02562 * 17 16 14 42 42 H 1.08994 * 109.47199 * 295.00280 * 20 18 17 43 43 H 1.09000 * 109.46923 * 55.00715 * 20 18 17 44 44 H 0.96707 * 114.00053 * 180.02562 * 21 20 18 45 45 H 1.08999 * 109.46931 * 60.00356 * 22 18 17 46 46 H 1.09000 * 109.46554 * 179.97438 * 22 18 17 47 47 H 1.09004 * 109.47514 * 299.99309 * 23 14 13 48 48 H 1.08994 * 109.47448 * 59.99972 * 23 14 13 49 49 H 1.07997 * 119.97505 * 179.97438 * 26 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6331 -0.0097 2.1936 6 6 3.1004 -0.6597 3.3199 7 6 2.8543 -2.0138 3.4899 8 8 3.3075 -2.6540 4.5999 9 6 4.0301 -1.8700 5.5514 10 6 4.4504 -2.7428 6.7059 11 8 4.1593 -3.9202 6.7133 12 7 5.1488 -2.2148 7.7305 13 6 5.5568 -3.0631 8.8530 14 6 6.3306 -2.2237 9.8718 15 1 5.7260 -1.3677 10.1712 16 6 6.6486 -3.0783 11.1003 17 6 7.4218 -2.2387 12.1192 18 6 8.7261 -1.7460 11.4893 19 1 9.3311 -2.6019 11.1898 20 6 9.4996 -0.9069 12.5084 21 8 10.7689 -0.5441 11.9613 22 6 8.4081 -0.8914 10.2606 23 6 7.6349 -1.7315 9.2413 24 6 2.1438 -2.7144 2.5246 25 35 1.8052 -4.5608 2.7524 26 6 1.6834 -2.0605 1.3975 27 1 -0.3934 0.4418 0.7650 28 1 1.7923 -0.5139 -0.8899 29 1 1.5614 2.4679 -1.2085 30 1 1.5878 2.4586 1.2242 31 1 2.8210 1.0459 2.0630 32 1 3.6528 -0.1126 4.0695 33 1 4.9147 -1.4462 5.0761 34 1 3.3932 -1.0647 5.9173 35 1 5.3812 -1.2731 7.7247 36 1 4.6723 -3.4873 9.3282 37 1 6.1941 -3.8682 8.4871 38 1 5.7194 -3.4290 11.5494 39 1 7.2532 -3.9344 10.8007 40 1 6.8169 -1.3830 12.4187 41 1 7.6488 -2.8477 12.9943 42 1 8.9333 -0.0053 12.7414 43 1 9.6490 -1.4877 13.4186 44 1 11.3148 -0.0100 12.5546 45 1 7.8032 -0.0355 10.5601 46 1 9.3373 -0.5400 9.8121 47 1 8.2395 -2.5876 8.9418 48 1 7.4083 -1.1227 8.3661 49 1 1.1310 -2.6048 0.6459 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14939082_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:24 Heat of formation + Delta-G solvation = -138.553201 kcal Electronic energy + Delta-G solvation = -30314.753040 eV Core-core repulsion = 25868.294866 eV Total energy + Delta-G solvation = -4446.458173 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.092 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.68687 -40.83555 -39.96468 -39.10694 -37.62386 -37.32009 -35.82468 -33.63146 -32.95948 -31.93674 -31.68805 -30.58080 -29.87131 -27.75025 -26.32108 -24.77853 -23.95422 -23.56697 -22.40446 -21.73305 -21.54642 -20.70592 -19.58760 -18.62342 -18.24305 -18.16102 -17.54946 -17.16236 -16.93613 -16.51680 -16.32140 -16.09152 -15.87189 -15.80671 -15.68434 -15.14120 -15.07011 -14.81637 -14.71132 -14.56762 -14.48612 -14.08617 -13.80850 -13.75899 -13.58990 -13.43200 -13.07744 -12.82175 -12.51489 -12.40070 -12.21122 -12.17920 -12.03107 -11.89452 -11.89128 -11.69320 -11.39455 -11.23758 -11.20084 -11.05933 -10.95040 -10.76405 -10.59787 -10.19008 -9.96963 -9.33379 -4.88636 -0.05463 0.11923 0.64127 1.33786 1.43178 1.46680 1.61989 2.01461 2.39009 2.53052 3.31498 3.41263 3.49571 3.61069 3.64249 3.74566 3.75785 3.77057 3.83913 4.02994 4.08210 4.11197 4.11826 4.19375 4.31394 4.32976 4.46360 4.50718 4.51916 4.58347 4.60338 4.64761 4.67338 4.70629 4.77902 4.82218 4.85422 4.97168 5.00366 5.10444 5.16939 5.22783 5.23480 5.25510 5.30590 5.37298 5.47368 5.48948 5.57783 6.06423 6.45311 6.50976 6.89184 7.14081 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.085 4.085 3 Si 0.778 3.222 4 C -0.149 4.149 5 C -0.056 4.056 6 C -0.189 4.189 7 C 0.149 3.851 8 O -0.306 6.306 9 C 0.033 3.967 10 C 0.509 3.491 11 O -0.572 6.572 12 N -0.707 5.707 13 C 0.127 3.873 14 C -0.086 4.086 15 H 0.095 0.905 16 C -0.113 4.113 17 C -0.107 4.107 18 C -0.091 4.091 19 H 0.059 0.941 20 C 0.075 3.925 21 O -0.596 6.596 22 C -0.106 4.106 23 C -0.113 4.113 24 C -0.145 4.145 25 Br -0.055 7.055 26 C -0.035 4.035 27 H 0.387 0.613 28 H 0.122 0.878 29 H -0.308 1.308 30 H -0.269 1.269 31 H 0.165 0.835 32 H 0.180 0.820 33 H 0.133 0.867 34 H 0.131 0.869 35 H 0.420 0.580 36 H 0.059 0.941 37 H 0.053 0.947 38 H 0.072 0.928 39 H 0.058 0.942 40 H 0.075 0.925 41 H 0.067 0.933 42 H 0.056 0.944 43 H 0.049 0.951 44 H 0.395 0.605 45 H 0.071 0.929 46 H 0.055 0.945 47 H 0.052 0.948 48 H 0.077 0.923 49 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.802 10.027 4.677 12.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.193 4.193 3 Si 0.682 3.318 4 C -0.150 4.150 5 C -0.073 4.073 6 C -0.208 4.208 7 C 0.101 3.899 8 O -0.218 6.218 9 C -0.045 4.045 10 C 0.295 3.705 11 O -0.450 6.450 12 N -0.362 5.362 13 C 0.003 3.997 14 C -0.104 4.104 15 H 0.113 0.887 16 C -0.151 4.151 17 C -0.144 4.144 18 C -0.110 4.110 19 H 0.077 0.923 20 C -0.002 4.002 21 O -0.405 6.405 22 C -0.143 4.143 23 C -0.150 4.150 24 C -0.225 4.225 25 Br 0.030 6.970 26 C -0.055 4.055 27 H 0.236 0.764 28 H 0.140 0.860 29 H -0.237 1.237 30 H -0.195 1.195 31 H 0.182 0.818 32 H 0.197 0.803 33 H 0.151 0.849 34 H 0.149 0.851 35 H 0.258 0.742 36 H 0.078 0.922 37 H 0.072 0.928 38 H 0.091 0.909 39 H 0.077 0.923 40 H 0.094 0.906 41 H 0.086 0.914 42 H 0.074 0.926 43 H 0.067 0.933 44 H 0.244 0.756 45 H 0.089 0.911 46 H 0.074 0.926 47 H 0.070 0.930 48 H 0.096 0.904 49 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 4.111 8.440 3.810 10.132 hybrid contribution -0.749 0.352 0.898 1.221 sum 3.361 8.792 4.708 10.524 Atomic orbital electron populations 1.86594 1.18672 1.80447 1.50199 1.25326 0.83384 1.12447 0.98118 0.94072 0.89886 0.71051 0.76770 1.20286 1.02621 0.93568 0.98571 1.21299 0.93568 1.00873 0.91609 1.21561 1.05940 0.91494 1.01807 1.18822 0.93249 0.91785 0.86080 1.86252 1.68701 1.37946 1.28929 1.22862 0.99727 0.93626 0.88257 1.20546 0.77991 0.87993 0.83939 1.90793 1.55853 1.18872 1.79514 1.45679 1.55858 1.14480 1.20201 1.21400 0.98524 0.93430 0.86350 1.21339 0.96305 0.98659 0.94140 0.88698 1.21488 1.00625 0.98022 0.94946 1.21456 0.94936 1.00157 0.97893 1.21194 0.96007 0.98042 0.95747 0.92264 1.22319 0.84160 0.98191 0.95546 1.86433 1.30421 1.75651 1.47953 1.21469 0.99873 0.97957 0.95002 1.21616 0.95385 0.99713 0.98301 1.21281 1.09802 0.91881 0.99491 1.96761 1.94951 1.07596 1.97720 1.20891 0.95705 0.94484 0.94378 0.76401 0.86021 1.23708 1.19526 0.81848 0.80306 0.84916 0.85109 0.74152 0.92239 0.92812 0.90903 0.92293 0.90599 0.91419 0.92584 0.93304 0.75578 0.91051 0.92630 0.92955 0.90400 0.84576 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.77 12.83 -148.98 -1.91 -2.68 16 2 C -0.08 0.22 2.80 71.24 0.20 0.42 16 3 Si 0.78 -4.36 29.89 68.60 2.05 -2.30 16 4 C -0.15 0.28 5.35 -19.85 -0.11 0.17 16 5 C -0.06 0.34 8.66 22.26 0.19 0.53 16 6 C -0.19 1.06 9.04 22.36 0.20 1.26 16 7 C 0.15 0.34 6.68 22.52 0.15 0.49 16 8 O -0.31 -1.48 9.01 -73.61 -0.66 -2.15 16 9 C 0.03 -0.17 5.22 71.24 0.37 0.21 16 10 C 0.51 0.99 7.91 87.66 0.69 1.69 16 11 O -0.57 -8.36 16.50 16.00 0.26 -8.09 16 12 N -0.71 3.62 5.28 -463.04 -2.45 1.17 16 13 C 0.13 -0.30 5.06 86.38 0.44 0.14 16 14 C -0.09 0.57 2.22 -10.79 -0.02 0.55 16 15 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 16 C -0.11 0.57 5.20 30.59 0.16 0.73 16 17 C -0.11 0.59 5.20 30.59 0.16 0.75 16 18 C -0.09 0.26 2.43 -10.79 -0.03 0.23 16 19 H 0.06 0.05 8.14 -2.38 -0.02 0.03 16 20 C 0.08 -0.24 6.43 71.98 0.46 0.22 16 21 O -0.60 0.06 13.19 -148.98 -1.97 -1.90 16 22 C -0.11 0.43 5.10 30.61 0.16 0.59 16 23 C -0.11 0.67 5.08 30.61 0.16 0.82 16 24 C -0.14 -0.84 6.24 22.40 0.14 -0.70 16 25 Br -0.06 -0.55 33.16 -20.37 -0.68 -1.23 16 26 C -0.03 -0.10 9.42 22.27 0.21 0.11 16 27 H 0.39 -1.77 8.70 -74.06 -0.64 -2.41 16 28 H 0.12 -0.41 7.96 -2.39 -0.02 -0.43 16 29 H -0.31 -1.06 7.11 99.48 0.71 -0.36 16 30 H -0.27 1.03 7.00 99.48 0.70 1.72 16 31 H 0.16 -1.90 4.83 -2.91 -0.01 -1.91 16 32 H 0.18 -2.50 6.30 -2.91 -0.02 -2.52 16 33 H 0.13 -1.64 7.66 -2.39 -0.02 -1.66 16 34 H 0.13 -1.60 7.66 -2.39 -0.02 -1.61 16 35 H 0.42 -5.40 7.66 -92.71 -0.71 -6.11 16 36 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 37 H 0.05 0.09 8.14 -2.39 -0.02 0.07 16 38 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 39 H 0.06 -0.17 8.14 -2.38 -0.02 -0.19 16 40 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 41 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 42 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 43 H 0.05 -0.20 8.14 -2.39 -0.02 -0.22 16 44 H 0.39 -3.22 9.12 -74.05 -0.68 -3.90 16 45 H 0.07 -0.43 8.14 -2.39 -0.02 -0.45 16 46 H 0.05 -0.02 7.82 -2.39 -0.02 -0.04 16 47 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 48 H 0.08 -0.70 7.18 -2.39 -0.02 -0.72 16 49 H 0.14 0.44 8.06 -2.91 -0.02 0.42 16 Total: 0.00 -29.13 412.66 -2.82 -31.95 By element: Atomic # 1 Polarization: -21.98 SS G_CDS: -1.01 Total: -22.98 kcal Atomic # 6 Polarization: 4.68 SS G_CDS: 3.53 Total: 8.22 kcal Atomic # 7 Polarization: 3.62 SS G_CDS: -2.45 Total: 1.17 kcal Atomic # 8 Polarization: -10.55 SS G_CDS: -4.28 Total: -14.83 kcal Atomic # 14 Polarization: -4.36 SS G_CDS: 2.05 Total: -2.30 kcal Atomic # 35 Polarization: -0.55 SS G_CDS: -0.68 Total: -1.23 kcal Total: -29.13 -2.82 -31.95 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.599 kcal (2) G-P(sol) polarization free energy of solvation -29.132 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.731 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.822 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.954 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.553 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds