Wall clock time and date at job start Tue Mar 9 2021 13:02:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.37945 * 120.07121 * 2 1 4 4 C 1.38379 * 120.14394 * 180.27431 * 3 2 1 5 5 C 1.50706 * 119.85669 * 179.72017 * 4 3 2 6 6 C 1.38339 * 120.29466 * 359.74521 * 4 3 2 7 7 C 1.50698 * 119.93013 * 179.97438 * 6 4 3 8 8 O 1.42896 * 109.47366 * 284.97519 * 7 6 4 9 9 Si 1.86297 * 109.47252 * 164.97827 * 7 6 4 10 10 C 1.37980 * 120.14214 * 359.97308 * 6 4 3 11 11 C 1.39555 * 119.85470 * 0.02733 * 10 6 4 12 12 C 1.47848 * 120.14541 * 179.97438 * 11 10 6 13 13 O 1.21551 * 119.99950 * 173.75843 * 12 11 10 14 14 N 1.34772 * 119.99742 * 353.75210 * 12 11 10 15 15 C 1.46504 * 119.99711 * 179.97438 * 14 12 11 16 16 C 1.52997 * 109.47079 * 179.97438 * 15 14 12 17 17 H 1.09006 * 109.46873 * 55.00406 * 16 15 14 18 18 C 1.53002 * 109.47448 * 175.00118 * 16 15 14 19 19 C 1.52997 * 109.47598 * 180.02562 * 18 16 15 20 20 C 1.53004 * 109.46873 * 299.99788 * 19 18 16 21 21 H 1.08997 * 109.47318 * 300.00042 * 20 19 18 22 22 C 1.53001 * 109.47185 * 179.97438 * 20 19 18 23 23 O 1.42897 * 109.47487 * 175.00458 * 22 20 19 24 24 C 1.53004 * 109.46664 * 60.00089 * 20 19 18 25 25 C 1.52997 * 109.47402 * 299.99586 * 24 20 19 26 26 H 1.09000 * 109.47062 * 263.66738 * 1 2 3 27 27 H 1.08998 * 109.47474 * 23.67102 * 1 2 3 28 28 H 1.09003 * 109.47232 * 143.66822 * 1 2 3 29 29 H 1.08000 * 119.92650 * 0.04214 * 3 2 1 30 30 H 1.09000 * 109.46910 * 270.02386 * 5 4 3 31 31 H 1.08999 * 109.46131 * 30.02053 * 5 4 3 32 32 H 1.08994 * 109.47147 * 150.02048 * 5 4 3 33 33 H 1.08999 * 109.47000 * 44.97509 * 7 6 4 34 34 H 0.96710 * 113.99923 * 59.99828 * 8 7 6 35 35 H 1.48499 * 110.00266 * 178.68141 * 9 7 6 36 36 H 1.48506 * 109.99967 * 300.00334 * 9 7 6 37 37 H 1.08007 * 120.07288 * 179.97438 * 10 6 4 38 38 H 0.96998 * 120.00752 * 0.02562 * 14 12 11 39 39 H 1.09004 * 109.47131 * 60.00734 * 15 14 12 40 40 H 1.08989 * 109.47514 * 300.00361 * 15 14 12 41 41 H 1.09006 * 109.46848 * 60.00273 * 18 16 15 42 42 H 1.09002 * 109.46787 * 300.00561 * 18 16 15 43 43 H 1.08997 * 109.47183 * 59.99913 * 19 18 16 44 44 H 1.09000 * 109.47452 * 180.02562 * 19 18 16 45 45 H 1.09002 * 109.46997 * 295.00507 * 22 20 19 46 46 H 1.08998 * 109.46953 * 55.00091 * 22 20 19 47 47 H 0.96693 * 114.00414 * 180.02562 * 23 22 20 48 48 H 1.08997 * 109.47292 * 59.99937 * 24 20 19 49 49 H 1.09002 * 109.46615 * 179.97438 * 24 20 19 50 50 H 1.09000 * 109.47452 * 179.97438 * 25 24 20 51 51 H 1.08997 * 109.47183 * 300.00417 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1981 1.1938 0.0000 4 6 3.5819 1.1955 -0.0057 5 6 4.3305 2.5035 -0.0121 6 6 4.2813 0.0020 -0.0062 7 6 5.7882 0.0135 -0.0130 8 8 6.2560 0.3623 -1.3174 9 14 6.4243 -1.6771 0.4432 10 6 3.6021 -1.1991 -0.0003 11 6 2.2066 -1.2080 0.0054 12 6 1.4722 -2.4912 0.0111 13 8 0.2626 -2.4987 0.1306 14 7 2.1441 -3.6525 -0.1163 15 6 1.4165 -4.9241 -0.1101 16 6 2.4070 -6.0792 -0.2695 17 1 3.1712 -6.0120 0.5049 18 6 1.6638 -7.4102 -0.1384 19 6 2.6544 -8.5653 -0.2972 20 6 3.3159 -8.4842 -1.6744 21 1 2.5520 -8.5516 -2.4490 22 6 4.3070 -9.6389 -1.8331 23 8 4.8384 -9.6318 -3.1595 24 6 4.0591 -7.1532 -1.8055 25 6 3.0685 -5.9981 -1.6467 26 1 -0.3633 -0.1134 1.0214 27 1 -0.3634 0.9412 -0.4126 28 1 -0.3634 -0.8279 -0.6089 29 1 1.6581 2.1291 0.0007 30 1 4.5063 2.8165 -1.0413 31 1 3.7407 3.2620 0.5027 32 1 5.2856 2.3780 0.4978 33 1 6.1492 0.7449 0.7100 34 1 5.9626 1.2324 -1.6209 35 1 7.9088 -1.6875 0.4091 36 1 5.9447 -2.0517 1.7978 37 1 4.1492 -2.1303 -0.0011 38 1 3.1094 -3.6466 -0.2113 39 1 0.7050 -4.9396 -0.9357 40 1 0.8810 -5.0318 0.8331 41 1 0.8996 -7.4774 -0.9127 42 1 1.1929 -7.4681 0.8429 43 1 3.4183 -8.4979 0.4774 44 1 2.1249 -9.5135 -0.2042 45 1 5.1192 -9.5218 -1.1157 46 1 3.7955 -10.5842 -1.6516 47 1 5.4751 -10.3388 -3.3320 48 1 4.8230 -7.0858 -1.0310 49 1 4.5307 -7.0956 -2.7865 50 1 3.5981 -5.0499 -1.7396 51 1 2.3046 -6.0655 -2.4212 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14939082_9599494.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:47 Heat of formation + Delta-G solvation = -118.750815 kcal Electronic energy + Delta-G solvation = -29519.342766 eV Core-core repulsion = 25576.705864 eV Total energy + Delta-G solvation = -3942.636901 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.198 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -41.72213 -40.41856 -39.72543 -37.75840 -37.47941 -35.94036 -34.33709 -33.75017 -32.49842 -31.64487 -29.56102 -28.77445 -27.67512 -25.59618 -24.72194 -23.83026 -23.54576 -22.24545 -21.65496 -21.02495 -20.60328 -18.92081 -18.26990 -18.14156 -17.26392 -16.76362 -16.44120 -16.30888 -16.22940 -16.09951 -15.76912 -15.33694 -15.21137 -14.91971 -14.89293 -14.68643 -14.57312 -14.42101 -14.17204 -13.93323 -13.76853 -13.44719 -13.38507 -13.03760 -12.97162 -12.82179 -12.74279 -12.70918 -12.56357 -12.42144 -12.14463 -11.98405 -11.85233 -11.36335 -11.35040 -11.22962 -11.08732 -11.01527 -10.75051 -10.67014 -10.19531 -9.90041 -9.62569 -4.98496 -0.28101 0.15495 1.33097 1.56572 1.74208 1.91874 2.10443 2.63665 3.35129 3.45078 3.54774 3.60104 3.69884 3.76769 3.79519 3.81863 3.82673 4.06314 4.10911 4.14530 4.24049 4.35142 4.36689 4.48495 4.50647 4.52030 4.54549 4.55946 4.64910 4.65177 4.69429 4.71208 4.74357 4.78120 4.81706 4.83694 4.89155 5.01438 5.03906 5.07250 5.14192 5.20193 5.21615 5.28367 5.29883 5.35913 5.40845 5.43197 5.50604 5.52314 5.62004 5.78172 6.45680 6.58801 6.92510 7.14491 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.029 4.029 3 C -0.133 4.133 4 C -0.043 4.043 5 C -0.130 4.130 6 C -0.137 4.137 7 C -0.083 4.083 8 O -0.545 6.545 9 Si 0.789 3.211 10 C -0.066 4.066 11 C -0.157 4.157 12 C 0.554 3.446 13 O -0.564 6.564 14 N -0.714 5.714 15 C 0.126 3.874 16 C -0.090 4.090 17 H 0.093 0.907 18 C -0.110 4.110 19 C -0.107 4.107 20 C -0.090 4.090 21 H 0.060 0.940 22 C 0.075 3.925 23 O -0.596 6.596 24 C -0.107 4.107 25 C -0.115 4.115 26 H 0.069 0.931 27 H 0.074 0.926 28 H 0.077 0.923 29 H 0.148 0.852 30 H 0.095 0.905 31 H 0.082 0.918 32 H 0.076 0.924 33 H 0.085 0.915 34 H 0.375 0.625 35 H -0.291 1.291 36 H -0.263 1.263 37 H 0.147 0.853 38 H 0.411 0.589 39 H 0.059 0.941 40 H 0.063 0.937 41 H 0.060 0.940 42 H 0.073 0.927 43 H 0.074 0.926 44 H 0.068 0.932 45 H 0.055 0.945 46 H 0.049 0.951 47 H 0.394 0.606 48 H 0.072 0.928 49 H 0.056 0.944 50 H 0.074 0.926 51 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.497 -0.803 0.711 3.658 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.030 4.030 3 C -0.151 4.151 4 C -0.044 4.044 5 C -0.186 4.186 6 C -0.138 4.138 7 C -0.192 4.192 8 O -0.352 6.352 9 Si 0.691 3.309 10 C -0.084 4.084 11 C -0.160 4.160 12 C 0.343 3.657 13 O -0.445 6.445 14 N -0.367 5.367 15 C 0.003 3.997 16 C -0.109 4.109 17 H 0.111 0.889 18 C -0.148 4.148 19 C -0.145 4.145 20 C -0.109 4.109 21 H 0.078 0.922 22 C -0.002 4.002 23 O -0.404 6.404 24 C -0.144 4.144 25 C -0.153 4.153 26 H 0.087 0.913 27 H 0.093 0.907 28 H 0.095 0.905 29 H 0.166 0.834 30 H 0.113 0.887 31 H 0.101 0.899 32 H 0.095 0.905 33 H 0.103 0.897 34 H 0.225 0.775 35 H -0.219 1.219 36 H -0.188 1.188 37 H 0.164 0.836 38 H 0.249 0.751 39 H 0.077 0.923 40 H 0.082 0.918 41 H 0.079 0.921 42 H 0.092 0.908 43 H 0.093 0.907 44 H 0.087 0.913 45 H 0.074 0.926 46 H 0.067 0.933 47 H 0.244 0.756 48 H 0.090 0.910 49 H 0.075 0.925 50 H 0.093 0.907 51 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 2.998 -1.373 1.337 3.558 hybrid contribution 0.341 1.107 0.283 1.192 sum 3.339 -0.266 1.620 3.721 Atomic orbital electron populations 1.21008 0.90087 1.03257 1.03010 1.20246 0.97034 0.92029 0.93682 1.21191 0.93666 0.97984 1.02213 1.20264 0.93739 0.95825 0.94536 1.21075 1.00430 0.92894 1.04230 1.20155 0.96425 0.93125 1.04079 1.25527 0.91726 1.13378 0.88520 1.86756 1.75819 1.41135 1.31470 0.92407 0.77704 0.79595 0.81193 1.21166 0.92454 0.98024 0.96764 1.19723 0.93702 0.93058 1.09561 1.18428 0.86775 0.84443 0.76082 1.90734 1.15108 1.87628 1.51032 1.45887 1.11663 1.05410 1.73723 1.21445 0.94841 0.81667 1.01772 1.21383 0.97429 0.93316 0.98779 0.88907 1.21467 0.97825 0.93004 1.02500 1.21463 0.98639 0.98599 0.95777 1.21187 0.97026 0.94672 0.98009 0.92158 1.22319 0.96331 0.98005 0.83552 1.86434 1.64366 1.57723 1.31875 1.21472 0.97708 0.93212 1.02009 1.21626 0.98555 0.98954 0.96133 0.91281 0.90670 0.90471 0.83399 0.88658 0.89905 0.90529 0.89746 0.77535 1.21859 1.18813 0.83565 0.75106 0.92309 0.91825 0.92084 0.90818 0.90692 0.91315 0.92645 0.93273 0.75630 0.90974 0.92527 0.90735 0.92721 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.63 8.73 71.23 0.62 -0.01 16 2 C -0.03 -0.14 5.91 -19.61 -0.12 -0.25 16 3 C -0.13 -0.11 9.31 22.23 0.21 0.09 16 4 C -0.04 0.04 5.87 -19.80 -0.12 -0.08 16 5 C -0.13 0.80 8.73 71.24 0.62 1.42 16 6 C -0.14 0.01 5.26 -19.90 -0.10 -0.09 16 7 C -0.08 0.12 2.09 71.24 0.15 0.27 16 8 O -0.54 0.28 12.65 -148.98 -1.89 -1.60 16 9 Si 0.79 -1.39 30.16 68.60 2.07 0.68 16 10 C -0.07 -0.02 8.13 22.53 0.18 0.16 16 11 C -0.16 -0.70 5.87 -20.09 -0.12 -0.82 16 12 C 0.55 3.59 7.70 86.79 0.67 4.26 16 13 O -0.56 -7.41 13.35 -3.87 -0.05 -7.47 16 14 N -0.71 -0.05 5.23 -465.98 -2.44 -2.49 16 15 C 0.13 -0.05 5.07 86.38 0.44 0.39 16 16 C -0.09 0.42 2.22 -10.79 -0.02 0.39 16 17 H 0.09 -0.63 8.14 -2.38 -0.02 -0.65 16 18 C -0.11 0.46 5.20 30.59 0.16 0.62 16 19 C -0.11 0.50 5.20 30.59 0.16 0.65 16 20 C -0.09 0.17 2.43 -10.79 -0.03 0.14 16 21 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 22 C 0.08 -0.17 6.43 71.98 0.46 0.29 16 23 O -0.60 -0.48 13.19 -148.98 -1.97 -2.44 16 24 C -0.11 0.26 5.10 30.59 0.16 0.42 16 25 C -0.12 0.42 5.08 30.59 0.16 0.57 16 26 H 0.07 0.45 8.14 -2.39 -0.02 0.43 16 27 H 0.07 0.10 8.04 -2.39 -0.02 0.08 16 28 H 0.08 0.74 5.87 -2.39 -0.01 0.73 16 29 H 0.15 -0.44 8.06 -2.91 -0.02 -0.47 16 30 H 0.10 -0.84 7.77 -2.39 -0.02 -0.86 16 31 H 0.08 -0.58 8.08 -2.39 -0.02 -0.60 16 32 H 0.08 -0.52 6.22 -2.39 -0.01 -0.54 16 33 H 0.09 -0.26 6.48 -2.39 -0.02 -0.28 16 34 H 0.38 -2.24 7.71 -74.05 -0.57 -2.81 16 35 H -0.29 -1.45 7.11 99.48 0.71 -0.74 16 36 H -0.26 -0.20 7.11 99.48 0.71 0.51 16 37 H 0.15 -0.76 3.52 -2.91 -0.01 -0.77 16 38 H 0.41 -2.20 5.73 -92.71 -0.53 -2.73 16 39 H 0.06 0.15 8.14 -2.38 -0.02 0.13 16 40 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 41 H 0.06 -0.15 8.14 -2.38 -0.02 -0.17 16 42 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 43 H 0.07 -0.45 8.14 -2.39 -0.02 -0.47 16 44 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 45 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 46 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 47 H 0.39 -2.86 9.12 -74.06 -0.68 -3.53 16 48 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 49 H 0.06 0.06 7.82 -2.39 -0.02 0.04 16 50 H 0.07 -0.42 7.18 -2.39 -0.02 -0.44 16 51 H 0.05 -0.04 8.14 -2.39 -0.02 -0.06 16 Total: 0.00 -17.86 390.59 -1.58 -19.45 By element: Atomic # 1 Polarization: -13.78 SS G_CDS: -0.79 Total: -14.56 kcal Atomic # 6 Polarization: 4.96 SS G_CDS: 3.48 Total: 8.44 kcal Atomic # 7 Polarization: -0.05 SS G_CDS: -2.44 Total: -2.49 kcal Atomic # 8 Polarization: -7.61 SS G_CDS: -3.90 Total: -11.51 kcal Atomic # 14 Polarization: -1.39 SS G_CDS: 2.07 Total: 0.68 kcal Total: -17.86 -1.58 -19.45 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_9599494.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.303 kcal (2) G-P(sol) polarization free energy of solvation -17.864 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.583 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.447 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.751 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds