Wall clock time and date at job start Tue Mar 9 2021 13:02:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36774 * 125.79848 * 2 1 4 4 C 1.47263 * 126.94146 * 359.97438 * 3 2 1 5 5 O 1.21629 * 119.99996 * 359.97438 * 4 3 2 6 6 N 1.34775 * 119.99746 * 180.02562 * 4 3 2 7 7 C 1.46504 * 119.99531 * 179.97438 * 6 4 3 8 8 C 1.53006 * 109.46883 * 179.97438 * 7 6 4 9 9 H 1.08997 * 109.47395 * 305.00649 * 8 7 6 10 10 C 1.52999 * 109.46811 * 65.00265 * 8 7 6 11 11 C 1.52996 * 109.47179 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.47201 * 300.00021 * 11 10 8 13 13 H 1.08997 * 109.47219 * 300.00244 * 12 11 10 14 14 C 1.52996 * 109.47413 * 179.97438 * 12 11 10 15 15 O 1.42901 * 109.46963 * 65.00144 * 14 12 11 16 16 C 1.53003 * 109.46897 * 59.99589 * 12 11 10 17 17 C 1.52996 * 109.47531 * 300.00209 * 16 12 11 18 18 C 1.46682 * 106.11537 * 180.24320 * 3 2 1 19 19 C 1.34491 * 106.33147 * 359.56766 * 18 3 2 20 20 C 1.50698 * 125.57236 * 180.15090 * 19 18 3 21 21 O 1.42901 * 109.47047 * 245.33513 * 20 19 18 22 22 Si 1.86309 * 109.47325 * 5.33269 * 20 19 18 23 23 N 1.34655 * 125.80600 * 179.97438 * 2 1 3 24 24 H 1.09000 * 109.47581 * 90.00360 * 1 2 3 25 25 H 1.09007 * 109.46615 * 210.00116 * 1 2 3 26 26 H 1.08995 * 109.47302 * 330.00050 * 1 2 3 27 27 H 0.96992 * 120.00503 * 359.97438 * 6 4 3 28 28 H 1.09001 * 109.46891 * 60.00097 * 7 6 4 29 29 H 1.08993 * 109.47378 * 299.99469 * 7 6 4 30 30 H 1.09009 * 109.47170 * 300.00068 * 10 8 7 31 31 H 1.09001 * 109.47273 * 59.99848 * 10 8 7 32 32 H 1.08998 * 109.47611 * 180.02562 * 11 10 8 33 33 H 1.09001 * 109.47165 * 59.99753 * 11 10 8 34 34 H 1.09006 * 109.47245 * 184.99871 * 14 12 11 35 35 H 1.09001 * 109.47250 * 305.00039 * 14 12 11 36 36 H 0.96697 * 114.00371 * 180.02562 * 15 14 12 37 37 H 1.09001 * 109.47183 * 179.97438 * 16 12 11 38 38 H 1.09001 * 109.47096 * 60.00495 * 16 12 11 39 39 H 1.09001 * 109.47165 * 300.00244 * 17 16 12 40 40 H 1.08995 * 109.47118 * 179.97438 * 17 16 12 41 41 H 1.08001 * 126.83692 * 179.74069 * 18 3 2 42 42 H 1.08997 * 109.47615 * 125.33430 * 20 19 18 43 43 H 0.96701 * 113.99862 * 180.02562 * 21 20 19 44 44 H 1.48496 * 110.00237 * 178.68119 * 22 20 19 45 45 H 1.48501 * 109.99487 * 300.00424 * 22 20 19 46 46 H 0.97003 * 124.85104 * 359.97438 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8701 2.5157 -0.0005 5 8 0.6838 2.7839 -0.0015 6 7 2.7848 3.5055 -0.0010 7 6 2.3501 4.9045 -0.0021 8 6 3.5764 5.8196 -0.0017 9 1 4.2196 5.5649 0.8406 10 6 4.3505 5.6353 -1.3085 11 6 5.5771 6.5498 -1.3080 12 6 5.1269 8.0067 -1.1830 13 1 4.4838 8.2618 -2.0253 14 6 6.3535 8.9212 -1.1819 15 8 7.0121 8.8363 -2.4472 16 6 4.3527 8.1910 0.1237 17 6 3.1261 7.2765 0.1232 18 6 3.6881 0.6153 -0.0060 19 6 3.6096 -0.7273 0.0007 20 6 4.7820 -1.6741 0.0013 21 8 4.7952 -2.4166 -1.2196 22 14 6.3645 -0.7029 0.1546 23 7 2.2948 -1.0921 0.0005 24 1 -0.3634 -0.0001 -1.0276 25 1 -0.3633 -0.8901 0.5139 26 1 -0.3633 0.8899 0.5138 27 1 3.7309 3.2916 -0.0006 28 1 1.7514 5.0996 0.8877 29 1 1.7519 5.0984 -0.8923 30 1 4.6716 4.5973 -1.3973 31 1 3.7073 5.8899 -2.1509 32 1 6.1284 6.4188 -2.2391 33 1 6.2201 6.2947 -0.4656 34 1 6.0396 9.9499 -1.0040 35 1 7.0388 8.6090 -0.3938 36 1 7.8008 9.3912 -2.5181 37 1 4.0324 9.2290 0.2130 38 1 4.9957 7.9359 0.9661 39 1 2.4831 7.5315 -0.7192 40 1 2.5749 7.4075 1.0543 41 1 4.5889 1.2111 -0.0115 42 1 4.6941 -2.3608 0.8432 43 1 5.5247 -3.0476 -1.2883 44 1 7.5264 -1.6270 0.1884 45 1 6.4961 0.2371 -0.9875 46 1 1.9735 -2.0073 0.0013 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_9865296.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:55 Heat of formation + Delta-G solvation = -100.327031 kcal Electronic energy + Delta-G solvation = -25821.997616 eV Core-core repulsion = 22098.497478 eV Total energy + Delta-G solvation = -3723.500138 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.177 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.37734 -40.51498 -39.54347 -37.92601 -37.55001 -35.56736 -33.09675 -32.78651 -31.81903 -31.70454 -29.14571 -28.05890 -25.62159 -24.63672 -23.76152 -22.71141 -21.67365 -21.32935 -20.89217 -20.25390 -18.71361 -18.35172 -18.19798 -17.05049 -16.67491 -16.52434 -16.12072 -15.93527 -15.83839 -15.39477 -15.16147 -14.96274 -14.83536 -14.65464 -14.49490 -14.21669 -13.86177 -13.82456 -13.74070 -13.42475 -13.34778 -13.10761 -12.99400 -12.77776 -12.50246 -12.39109 -12.07139 -11.97780 -11.88020 -11.41635 -11.16146 -11.06366 -10.81090 -10.76863 -10.56053 -9.94531 -9.72789 -9.08406 -5.02949 0.87308 1.07490 1.25906 1.52146 1.86337 2.17432 2.59727 2.75029 3.16210 3.21866 3.63964 3.71924 3.72993 3.78120 3.90262 4.05682 4.08922 4.15065 4.23383 4.28052 4.30584 4.43238 4.47129 4.50787 4.54662 4.57271 4.63950 4.69119 4.75089 4.77086 4.81420 4.91148 4.94391 5.05507 5.06975 5.15875 5.20079 5.24840 5.26785 5.32517 5.45170 5.53387 5.68506 5.75098 5.95326 6.25500 6.44293 6.69358 6.79845 7.57274 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C 0.121 3.879 3 C -0.235 4.235 4 C 0.593 3.407 5 O -0.549 6.549 6 N -0.727 5.727 7 C 0.126 3.874 8 C -0.099 4.099 9 H 0.078 0.922 10 C -0.116 4.116 11 C -0.110 4.110 12 C -0.089 4.089 13 H 0.077 0.923 14 C 0.078 3.922 15 O -0.574 6.574 16 C -0.112 4.112 17 C -0.110 4.110 18 C -0.155 4.155 19 C 0.032 3.968 20 C -0.057 4.057 21 O -0.541 6.541 22 Si 0.707 3.293 23 N -0.537 5.537 24 H 0.080 0.920 25 H 0.065 0.935 26 H 0.104 0.896 27 H 0.399 0.601 28 H 0.068 0.932 29 H 0.067 0.933 30 H 0.063 0.937 31 H 0.065 0.935 32 H 0.070 0.930 33 H 0.060 0.940 34 H 0.045 0.955 35 H 0.045 0.955 36 H 0.379 0.621 37 H 0.066 0.934 38 H 0.065 0.935 39 H 0.067 0.933 40 H 0.069 0.931 41 H 0.149 0.851 42 H 0.075 0.925 43 H 0.383 0.617 44 H -0.259 1.259 45 H -0.249 1.249 46 H 0.418 0.582 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.081 -0.478 3.875 5.648 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.002 3.998 3 C -0.245 4.245 4 C 0.382 3.618 5 O -0.428 6.428 6 N -0.378 5.378 7 C 0.002 3.998 8 C -0.118 4.118 9 H 0.097 0.903 10 C -0.154 4.154 11 C -0.147 4.147 12 C -0.107 4.107 13 H 0.096 0.904 14 C 0.000 4.000 15 O -0.379 6.379 16 C -0.150 4.150 17 C -0.148 4.148 18 C -0.179 4.179 19 C -0.077 4.077 20 C -0.166 4.166 21 O -0.349 6.349 22 Si 0.606 3.394 23 N -0.132 5.132 24 H 0.099 0.901 25 H 0.084 0.916 26 H 0.122 0.878 27 H 0.234 0.766 28 H 0.086 0.914 29 H 0.086 0.914 30 H 0.081 0.919 31 H 0.084 0.916 32 H 0.088 0.912 33 H 0.079 0.921 34 H 0.063 0.937 35 H 0.063 0.937 36 H 0.226 0.774 37 H 0.084 0.916 38 H 0.084 0.916 39 H 0.086 0.914 40 H 0.087 0.913 41 H 0.166 0.834 42 H 0.093 0.907 43 H 0.231 0.769 44 H -0.184 1.184 45 H -0.173 1.173 46 H 0.255 0.745 Dipole moment (debyes) X Y Z Total from point charges 2.969 -0.265 3.275 4.428 hybrid contribution 0.946 -1.287 -0.542 1.687 sum 3.915 -1.552 2.733 5.020 Atomic orbital electron populations 1.20635 0.86593 1.04487 1.03805 1.20428 0.93836 0.85327 1.00246 1.19973 0.92529 0.92136 1.19820 1.17270 0.85239 0.83952 0.75311 1.90753 1.16602 1.84394 1.51090 1.45758 1.09791 1.05906 1.76373 1.21389 0.96360 0.79566 1.02487 1.21438 0.96279 0.95151 0.98957 0.90327 1.21632 0.96996 0.99579 0.97173 1.21515 0.97254 0.93527 1.02434 1.21176 0.95581 0.95254 0.98702 0.90416 1.22253 0.94043 0.98431 0.85235 1.86478 1.45447 1.70729 1.35251 1.21501 0.96777 0.99804 0.96889 1.21465 0.97512 0.93180 1.02622 1.21700 0.96155 0.92374 1.07670 1.19454 0.83575 0.93617 1.11045 1.24520 1.04893 0.98179 0.89007 1.86598 1.53521 1.56616 1.38136 0.94534 0.73162 0.82394 0.89286 1.41547 1.05464 1.08783 1.57405 0.90148 0.91576 0.87754 0.76600 0.91351 0.91422 0.91874 0.91598 0.91156 0.92106 0.93721 0.93684 0.77367 0.91554 0.91619 0.91394 0.91252 0.83361 0.90710 0.76873 1.18363 1.17326 0.74502 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.10 9.88 36.01 0.36 0.26 16 2 C 0.12 0.27 7.17 -81.88 -0.59 -0.32 16 3 C -0.24 -0.71 6.29 -103.35 -0.65 -1.36 16 4 C 0.59 2.40 7.81 -12.59 -0.10 2.30 16 5 O -0.55 -3.85 14.81 5.25 0.08 -3.78 16 6 N -0.73 -0.83 5.28 -61.43 -0.32 -1.15 16 7 C 0.13 0.07 5.07 -4.04 -0.02 0.05 16 8 C -0.10 0.13 2.22 -90.62 -0.20 -0.07 16 9 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 10 C -0.12 0.08 5.08 -26.73 -0.14 -0.06 16 11 C -0.11 0.03 5.10 -26.73 -0.14 -0.10 16 12 C -0.09 0.03 2.43 -90.62 -0.22 -0.19 16 13 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 14 C 0.08 -0.04 6.43 37.16 0.24 0.19 16 15 O -0.57 -0.44 13.19 -35.23 -0.46 -0.91 16 16 C -0.11 0.17 5.20 -26.73 -0.14 0.03 16 17 C -0.11 0.15 5.21 -26.73 -0.14 0.02 16 18 C -0.15 -0.18 9.03 -37.50 -0.34 -0.52 16 19 C 0.03 0.03 6.51 -81.87 -0.53 -0.50 16 20 C -0.06 0.06 3.07 36.00 0.11 0.17 16 21 O -0.54 -0.15 12.86 -35.23 -0.45 -0.60 16 22 Si 0.71 -1.36 30.58 -169.99 -5.20 -6.56 16 23 N -0.54 -0.39 5.90 -5.42 -0.03 -0.42 16 24 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 25 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 26 H 0.10 0.29 6.47 -51.93 -0.34 -0.05 16 27 H 0.40 -0.39 6.78 -40.82 -0.28 -0.66 16 28 H 0.07 0.09 8.14 -51.93 -0.42 -0.34 16 29 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 30 H 0.06 -0.06 7.18 -51.92 -0.37 -0.43 16 31 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 32 H 0.07 0.09 7.82 -51.93 -0.41 -0.32 16 33 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 35 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.38 -1.24 9.12 45.56 0.42 -0.83 16 37 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 38 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.15 -0.18 5.88 -52.49 -0.31 -0.49 16 42 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 43 H 0.38 -1.43 8.74 45.56 0.40 -1.03 16 44 H -0.26 0.02 7.11 56.52 0.40 0.42 16 45 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 46 H 0.42 -0.62 8.96 -40.82 -0.37 -0.99 16 LS Contribution 366.23 15.07 5.52 5.52 Total: 0.00 -9.06 366.23 -10.15 -19.22 By element: Atomic # 1 Polarization: -4.44 SS G_CDS: -6.78 Total: -11.22 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: -2.49 Total: -0.10 kcal Atomic # 7 Polarization: -1.22 SS G_CDS: -0.36 Total: -1.58 kcal Atomic # 8 Polarization: -4.44 SS G_CDS: -0.84 Total: -5.28 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.20 Total: -6.56 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -9.06 -10.15 -19.22 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_9865296.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.110 kcal (2) G-P(sol) polarization free energy of solvation -9.065 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.175 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.152 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.217 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.327 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds