Wall clock time and date at job start Tue Mar 9 2021 13:02:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36774 * 125.79848 * 2 1 4 4 C 1.47263 * 126.94146 * 359.97438 * 3 2 1 5 5 O 1.21629 * 119.99996 * 359.97438 * 4 3 2 6 6 N 1.34775 * 119.99746 * 180.02562 * 4 3 2 7 7 C 1.46504 * 119.99531 * 179.97438 * 6 4 3 8 8 C 1.53006 * 109.46883 * 179.97438 * 7 6 4 9 9 H 1.08997 * 109.47395 * 305.00649 * 8 7 6 10 10 C 1.52999 * 109.46811 * 65.00265 * 8 7 6 11 11 C 1.52996 * 109.47179 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.47201 * 300.00021 * 11 10 8 13 13 H 1.08997 * 109.47219 * 300.00244 * 12 11 10 14 14 C 1.52996 * 109.47413 * 179.97438 * 12 11 10 15 15 O 1.42901 * 109.46963 * 65.00144 * 14 12 11 16 16 C 1.53003 * 109.46897 * 59.99589 * 12 11 10 17 17 C 1.52996 * 109.47531 * 300.00209 * 16 12 11 18 18 C 1.46682 * 106.11537 * 180.24320 * 3 2 1 19 19 C 1.34491 * 106.33147 * 359.56766 * 18 3 2 20 20 C 1.50698 * 125.57236 * 180.15090 * 19 18 3 21 21 O 1.42901 * 109.47047 * 245.33513 * 20 19 18 22 22 Si 1.86309 * 109.47325 * 5.33269 * 20 19 18 23 23 N 1.34655 * 125.80600 * 179.97438 * 2 1 3 24 24 H 1.09000 * 109.47581 * 90.00360 * 1 2 3 25 25 H 1.09007 * 109.46615 * 210.00116 * 1 2 3 26 26 H 1.08995 * 109.47302 * 330.00050 * 1 2 3 27 27 H 0.96992 * 120.00503 * 359.97438 * 6 4 3 28 28 H 1.09001 * 109.46891 * 60.00097 * 7 6 4 29 29 H 1.08993 * 109.47378 * 299.99469 * 7 6 4 30 30 H 1.09009 * 109.47170 * 300.00068 * 10 8 7 31 31 H 1.09001 * 109.47273 * 59.99848 * 10 8 7 32 32 H 1.08998 * 109.47611 * 180.02562 * 11 10 8 33 33 H 1.09001 * 109.47165 * 59.99753 * 11 10 8 34 34 H 1.09006 * 109.47245 * 184.99871 * 14 12 11 35 35 H 1.09001 * 109.47250 * 305.00039 * 14 12 11 36 36 H 0.96697 * 114.00371 * 180.02562 * 15 14 12 37 37 H 1.09001 * 109.47183 * 179.97438 * 16 12 11 38 38 H 1.09001 * 109.47096 * 60.00495 * 16 12 11 39 39 H 1.09001 * 109.47165 * 300.00244 * 17 16 12 40 40 H 1.08995 * 109.47118 * 179.97438 * 17 16 12 41 41 H 1.08001 * 126.83692 * 179.74069 * 18 3 2 42 42 H 1.08997 * 109.47615 * 125.33430 * 20 19 18 43 43 H 0.96701 * 113.99862 * 180.02562 * 21 20 19 44 44 H 1.48496 * 110.00237 * 178.68119 * 22 20 19 45 45 H 1.48501 * 109.99487 * 300.00424 * 22 20 19 46 46 H 0.97003 * 124.85104 * 359.97438 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8701 2.5157 -0.0005 5 8 0.6838 2.7839 -0.0015 6 7 2.7848 3.5055 -0.0010 7 6 2.3501 4.9045 -0.0021 8 6 3.5764 5.8196 -0.0017 9 1 4.2196 5.5649 0.8406 10 6 4.3505 5.6353 -1.3085 11 6 5.5771 6.5498 -1.3080 12 6 5.1269 8.0067 -1.1830 13 1 4.4838 8.2618 -2.0253 14 6 6.3535 8.9212 -1.1819 15 8 7.0121 8.8363 -2.4472 16 6 4.3527 8.1910 0.1237 17 6 3.1261 7.2765 0.1232 18 6 3.6881 0.6153 -0.0060 19 6 3.6096 -0.7273 0.0007 20 6 4.7820 -1.6741 0.0013 21 8 4.7952 -2.4166 -1.2196 22 14 6.3645 -0.7029 0.1546 23 7 2.2948 -1.0921 0.0005 24 1 -0.3634 -0.0001 -1.0276 25 1 -0.3633 -0.8901 0.5139 26 1 -0.3633 0.8899 0.5138 27 1 3.7309 3.2916 -0.0006 28 1 1.7514 5.0996 0.8877 29 1 1.7519 5.0984 -0.8923 30 1 4.6716 4.5973 -1.3973 31 1 3.7073 5.8899 -2.1509 32 1 6.1284 6.4188 -2.2391 33 1 6.2201 6.2947 -0.4656 34 1 6.0396 9.9499 -1.0040 35 1 7.0388 8.6090 -0.3938 36 1 7.8008 9.3912 -2.5181 37 1 4.0324 9.2290 0.2130 38 1 4.9957 7.9359 0.9661 39 1 2.4831 7.5315 -0.7192 40 1 2.5749 7.4075 1.0543 41 1 4.5889 1.2111 -0.0115 42 1 4.6941 -2.3608 0.8432 43 1 5.5247 -3.0476 -1.2883 44 1 7.5264 -1.6270 0.1884 45 1 6.4961 0.2371 -0.9875 46 1 1.9735 -2.0073 0.0013 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14939082_9865296.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:54 Heat of formation + Delta-G solvation = -103.056200 kcal Electronic energy + Delta-G solvation = -25822.115962 eV Core-core repulsion = 22098.497478 eV Total energy + Delta-G solvation = -3723.618483 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.177 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.45579 -40.59285 -39.67553 -37.87290 -37.56209 -35.71642 -33.14721 -32.87994 -31.87170 -31.66595 -29.16973 -28.08689 -25.65652 -24.65493 -23.73439 -22.80099 -21.69062 -21.37889 -20.89529 -20.36169 -18.64270 -18.41335 -18.17478 -17.13391 -16.82852 -16.60638 -16.15469 -15.96486 -15.80716 -15.41798 -15.20105 -14.98424 -14.83612 -14.66376 -14.52843 -14.36145 -13.88219 -13.85728 -13.80614 -13.48284 -13.39397 -13.06250 -13.00834 -12.76785 -12.49956 -12.40748 -12.01315 -11.98100 -11.86055 -11.37270 -11.15727 -11.03363 -10.90016 -10.74827 -10.61095 -10.15034 -9.82755 -9.18315 -4.87460 0.69481 1.11719 1.28297 1.64209 1.95502 2.13447 2.49882 2.53150 3.27305 3.33595 3.67533 3.75769 3.77040 3.80292 3.88093 4.04162 4.13901 4.16567 4.24142 4.33665 4.34538 4.48151 4.48864 4.53568 4.55405 4.62056 4.66804 4.68631 4.71393 4.74306 4.80928 4.86765 4.96510 5.01133 5.12507 5.16987 5.19465 5.25674 5.28403 5.35693 5.48156 5.52953 5.60865 5.65865 5.86314 6.42630 6.53801 6.66426 6.90735 7.35181 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C 0.111 3.889 3 C -0.259 4.259 4 C 0.586 3.414 5 O -0.588 6.588 6 N -0.715 5.715 7 C 0.128 3.872 8 C -0.087 4.087 9 H 0.093 0.907 10 C -0.114 4.114 11 C -0.105 4.105 12 C -0.090 4.090 13 H 0.059 0.941 14 C 0.076 3.924 15 O -0.597 6.597 16 C -0.106 4.106 17 C -0.110 4.110 18 C -0.160 4.160 19 C 0.025 3.975 20 C -0.065 4.065 21 O -0.563 6.563 22 Si 0.786 3.214 23 N -0.530 5.530 24 H 0.078 0.922 25 H 0.089 0.911 26 H 0.084 0.916 27 H 0.411 0.589 28 H 0.063 0.937 29 H 0.051 0.949 30 H 0.066 0.934 31 H 0.051 0.949 32 H 0.052 0.948 33 H 0.071 0.929 34 H 0.051 0.949 35 H 0.056 0.944 36 H 0.395 0.605 37 H 0.070 0.930 38 H 0.076 0.924 39 H 0.059 0.941 40 H 0.076 0.924 41 H 0.168 0.832 42 H 0.099 0.901 43 H 0.399 0.601 44 H -0.281 1.281 45 H -0.293 1.293 46 H 0.428 0.572 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.275 -1.053 4.984 7.333 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.009 4.009 3 C -0.269 4.269 4 C 0.376 3.624 5 O -0.470 6.470 6 N -0.366 5.366 7 C 0.004 3.996 8 C -0.106 4.106 9 H 0.111 0.889 10 C -0.151 4.151 11 C -0.143 4.143 12 C -0.109 4.109 13 H 0.077 0.923 14 C -0.002 4.002 15 O -0.405 6.405 16 C -0.144 4.144 17 C -0.148 4.148 18 C -0.184 4.184 19 C -0.084 4.084 20 C -0.173 4.173 21 O -0.374 6.374 22 Si 0.689 3.311 23 N -0.126 5.126 24 H 0.097 0.903 25 H 0.107 0.893 26 H 0.103 0.897 27 H 0.247 0.753 28 H 0.081 0.919 29 H 0.070 0.930 30 H 0.085 0.915 31 H 0.070 0.930 32 H 0.071 0.929 33 H 0.090 0.910 34 H 0.070 0.930 35 H 0.075 0.925 36 H 0.244 0.756 37 H 0.089 0.911 38 H 0.095 0.905 39 H 0.077 0.923 40 H 0.095 0.905 41 H 0.185 0.815 42 H 0.117 0.883 43 H 0.250 0.750 44 H -0.207 1.207 45 H -0.220 1.220 46 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges 4.201 -0.856 4.396 6.140 hybrid contribution 0.613 -1.122 -0.948 1.592 sum 4.813 -1.979 3.447 6.242 Atomic orbital electron populations 1.20577 0.86181 1.04634 1.03712 1.20609 0.94373 0.85744 1.00205 1.20096 0.93815 0.91827 1.21166 1.17556 0.85021 0.84880 0.74903 1.90724 1.18153 1.85022 1.53144 1.45693 1.10084 1.05707 1.75142 1.21378 0.97107 0.79625 1.01446 1.21345 0.95362 0.94809 0.99037 0.88863 1.21597 0.96775 0.99746 0.97012 1.21456 0.97164 0.93705 1.01930 1.21186 0.95698 0.95272 0.98723 0.92263 1.22325 0.94030 0.98754 0.85064 1.86439 1.46513 1.71487 1.36090 1.21461 0.96497 0.99985 0.96443 1.21472 0.97693 0.93004 1.02639 1.21948 0.96023 0.92840 1.07588 1.19845 0.84139 0.94057 1.10384 1.24747 1.04405 0.98659 0.89466 1.86547 1.54765 1.57321 1.38741 0.93617 0.71012 0.79456 0.87012 1.41571 1.05364 1.08991 1.56697 0.90330 0.89251 0.89715 0.75270 0.91871 0.93038 0.91520 0.93031 0.92919 0.91005 0.93038 0.92544 0.75606 0.91102 0.90542 0.92263 0.90548 0.81522 0.88301 0.74998 1.20737 1.21967 0.73322 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.29 9.88 71.24 0.70 0.42 16 2 C 0.11 0.56 7.17 41.78 0.30 0.86 16 3 C -0.26 -1.79 6.29 -19.04 -0.12 -1.91 16 4 C 0.59 5.63 7.81 86.62 0.68 6.31 16 5 O -0.59 -9.62 14.81 -4.12 -0.06 -9.68 16 6 N -0.71 -2.25 5.28 -466.51 -2.46 -4.71 16 7 C 0.13 0.29 5.07 86.38 0.44 0.73 16 8 C -0.09 0.22 2.22 -10.79 -0.02 0.19 16 9 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 10 C -0.11 0.09 5.08 30.59 0.16 0.24 16 11 C -0.11 0.04 5.10 30.59 0.16 0.19 16 12 C -0.09 0.05 2.43 -10.79 -0.03 0.02 16 13 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 14 C 0.08 -0.11 6.43 71.98 0.46 0.36 16 15 O -0.60 -1.07 13.19 -148.98 -1.97 -3.04 16 16 C -0.11 0.39 5.20 30.59 0.16 0.55 16 17 C -0.11 0.30 5.21 30.59 0.16 0.46 16 18 C -0.16 -0.36 9.03 23.62 0.21 -0.14 16 19 C 0.03 0.03 6.51 40.98 0.27 0.30 16 20 C -0.06 0.21 3.07 71.24 0.22 0.43 16 21 O -0.56 0.24 12.86 -148.98 -1.92 -1.68 16 22 Si 0.79 -3.72 30.58 68.60 2.10 -1.63 16 23 N -0.53 -0.61 5.90 -171.07 -1.01 -1.62 16 24 H 0.08 0.24 8.14 -2.39 -0.02 0.23 16 25 H 0.09 -0.21 8.14 -2.38 -0.02 -0.23 16 26 H 0.08 0.64 6.47 -2.39 -0.02 0.62 16 27 H 0.41 -0.75 6.78 -92.71 -0.63 -1.38 16 28 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 29 H 0.05 0.30 8.14 -2.39 -0.02 0.28 16 30 H 0.07 -0.10 7.18 -2.38 -0.02 -0.12 16 31 H 0.05 0.12 8.14 -2.39 -0.02 0.10 16 32 H 0.05 0.18 7.82 -2.39 -0.02 0.16 16 33 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 34 H 0.05 -0.15 8.14 -2.38 -0.02 -0.17 16 35 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 36 H 0.39 -2.56 9.12 -74.06 -0.68 -3.24 16 37 H 0.07 -0.30 8.14 -2.39 -0.02 -0.31 16 38 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 39 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 40 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 41 H 0.17 -0.50 5.88 -2.91 -0.02 -0.51 16 42 H 0.10 -0.77 7.96 -2.39 -0.02 -0.79 16 43 H 0.40 -3.40 8.74 -74.06 -0.65 -4.05 16 44 H -0.28 0.29 7.11 99.48 0.71 1.00 16 45 H -0.29 -0.74 7.11 99.48 0.71 -0.03 16 46 H 0.43 -1.55 8.96 -92.71 -0.83 -2.38 16 Total: 0.00 -22.20 366.23 -3.31 -25.50 By element: Atomic # 1 Polarization: -10.43 SS G_CDS: -1.73 Total: -12.15 kcal Atomic # 6 Polarization: 5.27 SS G_CDS: 3.74 Total: 9.01 kcal Atomic # 7 Polarization: -2.86 SS G_CDS: -3.47 Total: -6.33 kcal Atomic # 8 Polarization: -10.45 SS G_CDS: -3.94 Total: -14.40 kcal Atomic # 14 Polarization: -3.72 SS G_CDS: 2.10 Total: -1.63 kcal Total: -22.20 -3.31 -25.50 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_9865296.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.554 kcal (2) G-P(sol) polarization free energy of solvation -22.196 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.750 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.306 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.056 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds