Wall clock time and date at job start Tue Mar 9 2021 13:06:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17396 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 O 1.42899 * 109.47438 * 286.86664 * 3 2 1 5 5 C 1.42904 * 114.00336 * 180.02562 * 4 3 2 6 6 H 1.09004 * 109.46707 * 330.00525 * 5 4 3 7 7 C 1.53005 * 109.46771 * 89.99865 * 5 4 3 8 8 C 1.53000 * 109.46730 * 180.02562 * 7 5 4 9 9 C 1.53000 * 109.47430 * 300.00239 * 8 7 5 10 10 H 1.09007 * 109.46641 * 300.00357 * 9 8 7 11 11 N 1.46499 * 109.47070 * 180.02562 * 9 8 7 12 12 C 1.34777 * 120.00199 * 85.00207 * 11 9 8 13 13 O 1.21283 * 119.99750 * 359.97438 * 12 11 9 14 14 C 1.50702 * 119.99928 * 180.27479 * 12 11 9 15 15 O 1.42899 * 109.46876 * 179.72354 * 14 12 11 16 16 C 1.35897 * 116.99793 * 179.97438 * 15 14 12 17 17 C 1.38715 * 120.05860 * 179.72644 * 16 15 14 18 18 C 1.38160 * 119.94677 * 179.72078 * 17 16 15 19 19 C 1.50698 * 119.97344 * 180.27386 * 18 17 16 20 20 O 1.42893 * 109.47154 * 65.25381 * 19 18 17 21 21 Si 1.86310 * 109.47132 * 185.25703 * 19 18 17 22 22 C 1.38254 * 120.05495 * 0.53053 * 18 17 16 23 23 C 1.38283 * 120.10903 * 359.76607 * 22 18 17 24 24 C 1.38124 * 120.05920 * 359.95697 * 23 22 18 25 25 C 1.52995 * 109.47023 * 59.99951 * 9 8 7 26 26 C 1.52998 * 109.47295 * 209.99801 * 5 4 3 27 27 H 4.38452 * 5.44509 * 179.97438 * 4 1 2 28 28 H 1.09005 * 109.47084 * 166.87035 * 3 2 1 29 29 H 1.09003 * 109.47296 * 46.87087 * 3 2 1 30 30 H 1.09002 * 109.47187 * 300.00025 * 7 5 4 31 31 H 1.08999 * 109.47285 * 60.00494 * 7 5 4 32 32 H 1.09005 * 109.46716 * 179.97438 * 8 7 5 33 33 H 1.08998 * 109.47384 * 60.00347 * 8 7 5 34 34 H 0.97000 * 119.99484 * 264.99304 * 11 9 8 35 35 H 1.09004 * 109.46965 * 299.72211 * 14 12 11 36 36 H 1.08994 * 109.46990 * 59.72065 * 14 12 11 37 37 H 1.07997 * 120.02149 * 359.97438 * 17 16 15 38 38 H 1.09003 * 109.47037 * 305.25032 * 19 18 17 39 39 H 0.96701 * 114.00405 * 179.97438 * 20 19 18 40 40 H 1.48499 * 109.99647 * 178.68192 * 21 19 18 41 41 H 1.48502 * 109.99600 * 299.99792 * 21 19 18 42 42 H 1.07997 * 119.94037 * 179.74357 * 22 18 17 43 43 H 1.07998 * 119.96873 * 179.97438 * 23 22 18 44 44 H 1.08000 * 120.02948 * 180.02562 * 24 23 22 45 45 H 1.08999 * 109.47294 * 60.00050 * 25 9 8 46 46 H 1.09000 * 109.47292 * 180.02562 * 25 9 8 47 47 H 1.09008 * 109.46553 * 60.00157 * 26 5 4 48 48 H 1.08998 * 109.47289 * 300.00444 * 26 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1226 -0.3900 1.2893 5 6 4.5471 -0.4216 1.3974 6 1 4.9799 -0.6636 0.4267 7 6 5.0543 0.9476 1.8548 8 6 6.5795 0.9140 1.9699 9 6 6.9907 -0.1491 2.9905 10 1 6.5582 0.0928 3.9614 11 7 8.4512 -0.1808 3.1012 12 6 9.0829 0.6739 3.9300 13 8 8.4423 1.4695 4.5839 14 6 10.5857 0.6454 4.0392 15 8 11.0146 1.6420 4.9692 16 6 12.3520 1.7490 5.1855 17 6 12.8386 2.6991 6.0715 18 6 14.1983 2.8021 6.2940 19 6 14.7272 3.8298 7.2610 20 8 14.2802 3.5159 8.5814 21 14 16.5898 3.8227 7.2176 22 6 15.0745 1.9666 5.6264 23 6 14.5923 1.0229 4.7381 24 6 13.2335 0.9120 4.5164 25 6 6.4836 -1.5182 2.5332 26 6 4.9577 -1.4845 2.4184 27 1 -1.0500 0.0001 0.0002 28 1 3.0089 1.0017 -0.2334 29 1 3.0097 -0.7017 -0.7500 30 1 4.7617 1.7050 1.1274 31 1 4.6215 1.1898 2.8254 32 1 6.9409 1.8896 2.2953 33 1 7.0120 0.6722 0.9991 34 1 8.9634 -0.8170 2.5780 35 1 10.9063 -0.3371 4.3858 36 1 11.0248 0.8471 3.0622 37 1 12.1549 3.3549 6.5898 38 1 14.3610 4.8169 6.9784 39 1 14.5840 4.1369 9.2576 40 1 17.1232 4.8540 8.1435 41 1 17.1015 2.4824 7.6009 42 1 16.1372 2.0515 5.7987 43 1 15.2788 0.3717 4.2175 44 1 12.8574 0.1745 3.8228 45 1 6.9159 -1.7601 1.5623 46 1 6.7761 -2.2755 3.2605 47 1 4.5964 -2.4600 2.0925 48 1 4.5249 -1.2425 3.3890 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14940684_4860298.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:24 Heat of formation + Delta-G solvation = -63.363266 kcal Electronic energy + Delta-G solvation = -28829.651116 eV Core-core repulsion = 24625.356763 eV Total energy + Delta-G solvation = -4204.294352 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.166 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -41.59109 -40.94658 -39.98144 -38.90487 -37.84905 -37.31949 -35.07673 -33.92047 -32.59272 -31.99284 -31.78291 -30.45122 -28.77421 -27.57743 -26.73147 -23.98707 -23.64002 -23.48156 -22.24116 -21.56839 -21.09178 -19.39621 -19.13303 -18.52451 -18.34637 -17.92840 -17.51153 -17.44270 -17.03825 -16.89028 -16.60765 -16.28414 -15.81334 -15.62905 -15.57611 -15.07193 -14.97459 -14.78040 -14.53635 -14.35130 -14.03432 -13.89195 -13.70959 -13.59063 -13.53363 -13.34915 -13.29465 -12.73766 -12.49110 -12.40339 -12.27686 -12.14500 -11.98085 -11.89120 -11.71932 -11.65344 -11.36674 -11.28229 -10.87452 -10.52011 -10.47481 -10.16995 -9.89233 -9.23521 -4.96537 0.22507 0.43920 1.24389 1.42937 1.48412 1.55434 1.59932 1.86795 1.94995 2.52391 2.64866 2.85330 3.34381 3.41213 3.44917 3.53900 3.62747 3.74392 3.79167 3.88407 3.89603 3.91255 4.01971 4.02855 4.05808 4.11457 4.22016 4.22497 4.25166 4.27946 4.31849 4.38864 4.52059 4.53037 4.62667 4.66804 4.83665 4.90224 4.98421 4.99397 5.00412 5.05857 5.15500 5.19335 5.25142 5.36399 5.37492 5.49115 5.66565 6.13202 6.24118 6.38828 6.44347 6.63115 7.08543 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.200 4.200 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.089 3.911 6 H 0.066 0.934 7 C -0.140 4.140 8 C -0.127 4.127 9 C 0.144 3.856 10 H 0.094 0.906 11 N -0.725 5.725 12 C 0.516 3.484 13 O -0.510 6.510 14 C 0.040 3.960 15 O -0.288 6.288 16 C 0.129 3.871 17 C -0.120 4.120 18 C -0.033 4.033 19 C -0.079 4.079 20 O -0.534 6.534 21 Si 0.689 3.311 22 C -0.152 4.152 23 C -0.073 4.073 24 C -0.206 4.206 25 C -0.123 4.123 26 C -0.113 4.113 27 H 0.223 0.777 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.070 0.930 31 H 0.077 0.923 32 H 0.074 0.926 33 H 0.067 0.933 34 H 0.402 0.598 35 H 0.094 0.906 36 H 0.095 0.905 37 H 0.134 0.866 38 H 0.079 0.921 39 H 0.381 0.619 40 H -0.261 1.261 41 H -0.255 1.255 42 H 0.130 0.870 43 H 0.132 0.868 44 H 0.130 0.870 45 H 0.072 0.928 46 H 0.079 0.921 47 H 0.078 0.922 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.531 -2.273 -6.406 7.660 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C -0.200 4.200 3 C 0.098 3.902 4 O -0.295 6.295 5 C 0.032 3.968 6 H 0.084 0.916 7 C -0.178 4.178 8 C -0.166 4.166 9 C 0.040 3.960 10 H 0.112 0.888 11 N -0.379 5.379 12 C 0.301 3.699 13 O -0.383 6.383 14 C -0.038 4.038 15 O -0.201 6.201 16 C 0.083 3.917 17 C -0.138 4.138 18 C -0.033 4.033 19 C -0.188 4.188 20 O -0.342 6.342 21 Si 0.590 3.410 22 C -0.170 4.170 23 C -0.091 4.091 24 C -0.225 4.225 25 C -0.161 4.161 26 C -0.151 4.151 27 H 0.239 0.761 28 H 0.092 0.908 29 H 0.092 0.908 30 H 0.088 0.912 31 H 0.095 0.905 32 H 0.093 0.907 33 H 0.085 0.915 34 H 0.236 0.764 35 H 0.112 0.888 36 H 0.113 0.887 37 H 0.152 0.848 38 H 0.097 0.903 39 H 0.229 0.771 40 H -0.186 1.186 41 H -0.179 1.179 42 H 0.147 0.853 43 H 0.150 0.850 44 H 0.148 0.852 45 H 0.091 0.909 46 H 0.097 0.903 47 H 0.097 0.903 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 3.250 -2.218 -5.527 6.784 hybrid contribution -0.233 -0.134 0.425 0.502 sum 3.017 -2.352 -5.102 6.377 Atomic orbital electron populations 1.25055 0.95988 1.00132 0.97388 1.22505 0.93897 1.01161 1.02404 1.19112 0.84846 1.00191 0.86082 1.88001 1.21248 1.89180 1.31069 1.22199 0.80384 0.95206 0.99016 0.91627 1.22014 0.95156 0.97377 1.03299 1.21884 0.95435 1.00007 0.99260 1.21088 0.78809 0.95417 1.00662 0.88822 1.45880 1.07939 1.38691 1.45345 1.20049 0.88938 0.81172 0.79768 1.90794 1.67351 1.36903 1.43271 1.22466 0.93271 0.93377 0.94727 1.86169 1.20100 1.54139 1.59664 1.19003 0.81947 0.95308 0.95406 1.20248 0.94917 0.99528 0.99132 1.19021 0.92696 0.95972 0.95624 1.24861 1.11471 0.98789 0.83727 1.86603 1.75647 1.55773 1.16131 0.94968 0.74314 0.80920 0.90833 1.20927 0.99276 0.97210 0.99537 1.20876 0.94623 0.97018 0.96542 1.21284 0.94312 1.02585 1.04299 1.21779 0.95604 0.96221 1.02464 1.21524 0.94386 0.99022 1.00180 0.76065 0.90808 0.90779 0.91172 0.90456 0.90726 0.91451 0.76384 0.88786 0.88716 0.84775 0.90321 0.77136 1.18632 1.17945 0.85298 0.85005 0.85212 0.90900 0.90267 0.90333 0.90391 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.23 19.25 29.55 0.57 0.34 16 2 C -0.20 -0.48 13.73 -37.12 -0.51 -0.99 16 3 C 0.17 0.07 6.22 34.37 0.21 0.28 16 4 O -0.38 -0.68 9.95 -35.23 -0.35 -1.03 16 5 C 0.09 -0.08 2.61 -26.73 -0.07 -0.15 16 6 H 0.07 -0.16 7.79 -51.93 -0.40 -0.56 16 7 C -0.14 0.09 5.54 -26.73 -0.15 -0.06 16 8 C -0.13 0.13 5.49 -26.73 -0.15 -0.02 16 9 C 0.14 -0.18 2.45 -67.93 -0.17 -0.34 16 10 H 0.09 0.12 7.58 -51.93 -0.39 -0.28 16 11 N -0.73 1.52 5.08 -53.81 -0.27 1.24 16 12 C 0.52 0.66 7.87 -10.98 -0.09 0.57 16 13 O -0.51 -3.27 16.16 -14.35 -0.23 -3.50 16 14 C 0.04 -0.03 5.22 36.01 0.19 0.15 16 15 O -0.29 -0.98 9.67 -39.33 -0.38 -1.36 16 16 C 0.13 0.33 6.69 -39.21 -0.26 0.07 16 17 C -0.12 -0.38 9.63 -39.43 -0.38 -0.76 16 18 C -0.03 -0.07 5.38 -104.65 -0.56 -0.63 16 19 C -0.08 -0.05 2.79 36.00 0.10 0.05 16 20 O -0.53 -1.08 12.81 -35.23 -0.45 -1.53 16 21 Si 0.69 -0.51 29.85 -169.99 -5.07 -5.59 16 22 C -0.15 -0.10 8.67 -39.56 -0.34 -0.45 16 23 C -0.07 0.02 10.04 -39.61 -0.40 -0.38 16 24 C -0.21 -0.03 9.04 -39.43 -0.36 -0.38 16 25 C -0.12 0.38 5.39 -26.71 -0.14 0.24 16 26 C -0.11 0.18 5.58 -26.71 -0.15 0.03 16 27 H 0.22 -0.46 7.80 -54.09 -0.42 -0.88 16 28 H 0.07 -0.08 7.87 -51.93 -0.41 -0.49 16 29 H 0.07 -0.11 8.09 -51.93 -0.42 -0.53 16 30 H 0.07 -0.06 7.87 -51.93 -0.41 -0.47 16 31 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 32 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 33 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 34 H 0.40 -2.19 8.60 -40.82 -0.35 -2.54 16 35 H 0.09 -0.30 7.66 -51.93 -0.40 -0.70 16 36 H 0.10 -0.34 7.66 -51.93 -0.40 -0.74 16 37 H 0.13 0.47 8.06 -52.49 -0.42 0.05 16 38 H 0.08 -0.08 7.96 -51.93 -0.41 -0.49 16 39 H 0.38 -0.81 8.74 45.56 0.40 -0.41 16 40 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 41 H -0.25 -0.56 7.05 56.52 0.40 -0.17 16 42 H 0.13 -0.14 4.86 -52.49 -0.26 -0.39 16 43 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 44 H 0.13 -0.36 6.30 -52.49 -0.33 -0.69 16 45 H 0.07 -0.32 8.14 -51.93 -0.42 -0.75 16 46 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 47 H 0.08 -0.13 8.14 -51.92 -0.42 -0.56 16 48 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 LS Contribution 401.15 15.07 6.05 6.05 Total: 0.00 -11.30 401.15 -10.58 -21.87 By element: Atomic # 1 Polarization: -6.52 SS G_CDS: -7.21 Total: -13.73 kcal Atomic # 6 Polarization: 0.22 SS G_CDS: -2.65 Total: -2.43 kcal Atomic # 7 Polarization: 1.52 SS G_CDS: -0.27 Total: 1.24 kcal Atomic # 8 Polarization: -6.00 SS G_CDS: -1.41 Total: -7.42 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -5.07 Total: -5.59 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -11.30 -10.58 -21.87 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_4860298.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.491 kcal (2) G-P(sol) polarization free energy of solvation -11.295 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.786 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.577 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.873 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.363 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds