Wall clock time and date at job start Tue Mar 9 2021 13:06:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17396 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 O 1.42893 * 109.47122 * 66.80140 * 3 2 1 5 5 C 1.42900 * 114.00135 * 179.97438 * 4 3 2 6 6 H 1.09001 * 109.47240 * 330.00027 * 5 4 3 7 7 C 1.53009 * 109.47167 * 89.99814 * 5 4 3 8 8 C 1.53002 * 109.47090 * 180.02562 * 7 5 4 9 9 C 1.52996 * 109.47141 * 300.00105 * 8 7 5 10 10 H 1.09001 * 109.47066 * 300.00262 * 9 8 7 11 11 N 1.46496 * 109.47084 * 180.02562 * 9 8 7 12 12 C 1.34777 * 120.00271 * 84.99619 * 11 9 8 13 13 O 1.21278 * 119.99854 * 0.02562 * 12 11 9 14 14 C 1.50703 * 120.00161 * 180.02562 * 12 11 9 15 15 O 1.42898 * 109.47171 * 180.02562 * 14 12 11 16 16 C 1.35897 * 117.00481 * 180.02562 * 15 14 12 17 17 C 1.38742 * 120.03212 * 179.72602 * 16 15 14 18 18 C 1.50700 * 119.97132 * 359.97072 * 17 16 15 19 19 O 1.42898 * 109.46853 * 75.00537 * 18 17 16 20 20 Si 1.86302 * 109.47180 * 195.00214 * 18 17 16 21 21 C 1.38201 * 120.05694 * 179.71855 * 17 16 15 22 22 C 1.38152 * 120.10462 * 0.55360 * 21 17 16 23 23 C 1.38802 * 120.05755 * 359.72295 * 22 21 17 24 24 O 1.35896 * 120.02843 * 180.02562 * 23 22 21 25 25 C 1.42903 * 117.00261 * 359.97293 * 24 23 22 26 26 C 1.38612 * 119.94132 * 359.97438 * 23 22 21 27 27 C 1.53002 * 109.47405 * 60.00131 * 9 8 7 28 28 C 1.52998 * 109.47476 * 209.99764 * 5 4 3 29 29 H 4.38440 * 5.44433 * 179.97438 * 4 1 2 30 30 H 1.08999 * 109.47422 * 306.79681 * 3 2 1 31 31 H 1.09004 * 109.47086 * 186.80247 * 3 2 1 32 32 H 1.09004 * 109.46811 * 300.00511 * 7 5 4 33 33 H 1.09001 * 109.46866 * 59.99984 * 7 5 4 34 34 H 1.09002 * 109.46730 * 180.02562 * 8 7 5 35 35 H 1.08999 * 109.46674 * 60.00484 * 8 7 5 36 36 H 0.97005 * 120.00266 * 265.00202 * 11 9 8 37 37 H 1.09002 * 109.47152 * 60.00245 * 14 12 11 38 38 H 1.09001 * 109.46980 * 300.00345 * 14 12 11 39 39 H 1.08991 * 109.47683 * 315.00187 * 18 17 16 40 40 H 0.96699 * 114.00558 * 59.99552 * 19 18 17 41 41 H 1.48500 * 110.00246 * 180.02562 * 20 18 17 42 42 H 1.48503 * 109.99781 * 301.32039 * 20 18 17 43 43 H 1.07990 * 119.95063 * 180.27252 * 21 17 16 44 44 H 1.07998 * 119.97417 * 179.69826 * 22 21 17 45 45 H 1.08988 * 109.47563 * 180.02562 * 25 24 23 46 46 H 1.09003 * 109.47385 * 300.00803 * 25 24 23 47 47 H 1.09003 * 109.46702 * 60.00084 * 25 24 23 48 48 H 1.07998 * 120.04829 * 179.97438 * 26 23 22 49 49 H 1.08997 * 109.46609 * 59.99617 * 27 9 8 50 50 H 1.09002 * 109.47469 * 179.97438 * 27 9 8 51 51 H 1.09002 * 109.46949 * 60.00275 * 28 5 4 52 52 H 1.08997 * 109.47585 * 300.00411 * 28 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1225 -0.5298 -1.2383 5 6 4.5471 -0.5731 -1.3423 6 1 4.9790 0.2378 -0.7558 7 6 5.0567 -1.9144 -0.8109 8 6 6.5820 -1.9605 -0.9216 9 6 6.9919 -1.8036 -2.3872 10 1 6.5603 -2.6145 -2.9740 11 7 8.4524 -1.8483 -2.4933 12 6 9.0859 -3.0349 -2.5775 13 8 8.4470 -4.0656 -2.5658 14 6 10.5883 -3.0809 -2.6860 15 8 11.0190 -4.4413 -2.7620 16 6 12.3563 -4.6604 -2.8640 17 6 12.8439 -5.9573 -2.9362 18 6 11.8899 -7.1234 -2.9007 19 8 11.2263 -7.2343 -4.1613 20 14 12.8372 -8.6905 -2.5576 21 6 14.2034 -6.1806 -3.0458 22 6 15.0809 -5.1139 -3.0723 23 6 14.5984 -3.8147 -2.9946 24 8 15.4621 -2.7659 -3.0213 25 6 16.8534 -3.0736 -3.1301 26 6 13.2349 -3.5881 -2.8910 27 6 6.4824 -0.4624 -2.9186 28 6 4.9565 -0.4165 -2.8081 29 1 -1.0499 -0.0002 -0.0001 30 1 3.0096 -0.6147 0.8229 31 1 3.0088 1.0213 0.1217 32 1 4.7650 -2.0259 0.2335 33 1 4.6248 -2.7253 -1.3974 34 1 6.9450 -2.9162 -0.5434 35 1 7.0135 -1.1496 -0.3348 36 1 8.9635 -1.0239 -2.5030 37 1 11.0306 -2.6079 -1.8092 38 1 10.9042 -2.5495 -3.5838 39 1 11.1520 -6.9654 -2.1143 40 1 11.8230 -7.3764 -4.9089 41 1 11.9077 -9.8481 -2.5207 42 1 13.8680 -8.9007 -3.6058 43 1 14.5807 -7.1906 -3.1062 44 1 16.1432 -5.2910 -3.1531 45 1 17.4303 -2.1490 -3.1401 46 1 17.1585 -3.6827 -2.2792 47 1 17.0325 -3.6240 -4.0537 48 1 12.8577 -2.5780 -2.8300 49 1 6.9139 0.3485 -2.3318 50 1 6.7748 -0.3504 -3.9627 51 1 4.5935 0.5390 -3.1866 52 1 4.5246 -1.2274 -3.3946 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14940684_4974312.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:30 Heat of formation + Delta-G solvation = -98.819537 kcal Electronic energy + Delta-G solvation = -33788.156185 eV Core-core repulsion = 29108.104522 eV Total energy + Delta-G solvation = -4680.051662 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.181 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -41.86240 -41.18996 -40.24447 -39.71371 -38.45479 -37.82758 -37.00359 -35.11687 -33.97603 -32.31587 -31.90261 -31.57078 -30.50175 -28.84128 -28.33535 -27.54679 -26.13820 -24.08891 -23.79579 -22.96025 -22.49464 -21.63551 -21.10426 -19.96736 -19.40108 -18.64103 -18.15714 -17.92155 -17.84809 -17.53431 -17.34354 -16.94193 -16.71988 -16.59699 -16.48545 -16.29855 -16.04284 -15.64816 -15.54011 -15.18310 -15.00363 -14.89258 -14.71644 -14.50833 -14.30731 -13.82213 -13.76092 -13.51746 -13.46813 -13.33686 -13.25632 -13.13964 -12.68476 -12.49479 -12.37297 -12.30457 -12.19305 -12.03666 -11.87976 -11.72448 -11.66018 -11.63111 -11.35538 -11.30185 -11.00342 -10.52184 -10.46977 -10.16555 -9.70420 -9.10796 -4.93947 0.19704 0.30439 1.30912 1.40977 1.42369 1.49833 1.54762 1.77633 1.95624 2.24742 2.54800 2.57282 2.87462 3.48167 3.49272 3.51932 3.61030 3.69242 3.72086 3.80018 3.94165 3.99800 4.02196 4.06308 4.08663 4.14011 4.16974 4.21990 4.28703 4.34386 4.35320 4.40420 4.42345 4.42955 4.45434 4.46798 4.59298 4.65666 4.78395 4.79640 4.90000 5.00431 5.01025 5.01928 5.08774 5.11949 5.22013 5.23273 5.25673 5.27616 5.41855 5.47482 6.13234 6.18639 6.35898 6.45285 6.55753 6.56634 7.12176 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.237 4.237 3 C 0.167 3.833 4 O -0.401 6.401 5 C 0.090 3.910 6 H 0.091 0.909 7 C -0.137 4.137 8 C -0.119 4.119 9 C 0.144 3.856 10 H 0.059 0.941 11 N -0.705 5.705 12 C 0.513 3.487 13 O -0.569 6.569 14 C 0.035 3.965 15 O -0.304 6.304 16 C 0.177 3.823 17 C -0.196 4.196 18 C -0.078 4.078 19 O -0.550 6.550 20 Si 0.781 3.219 21 C -0.041 4.041 22 C -0.238 4.238 23 C 0.165 3.835 24 O -0.329 6.329 25 C 0.016 3.984 26 C -0.251 4.251 27 C -0.111 4.111 28 C -0.113 4.113 29 H 0.248 0.752 30 H 0.085 0.915 31 H 0.094 0.906 32 H 0.073 0.927 33 H 0.051 0.949 34 H 0.048 0.952 35 H 0.091 0.909 36 H 0.422 0.578 37 H 0.126 0.874 38 H 0.120 0.880 39 H 0.097 0.903 40 H 0.381 0.619 41 H -0.309 1.309 42 H -0.262 1.262 43 H 0.155 0.845 44 H 0.157 0.843 45 H 0.117 0.883 46 H 0.070 0.930 47 H 0.066 0.934 48 H 0.154 0.846 49 H 0.100 0.900 50 H 0.086 0.914 51 H 0.085 0.915 52 H 0.057 0.943 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.080 7.557 2.700 11.388 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C -0.237 4.237 3 C 0.092 3.908 4 O -0.321 6.321 5 C 0.033 3.967 6 H 0.109 0.891 7 C -0.176 4.176 8 C -0.158 4.158 9 C 0.040 3.960 10 H 0.078 0.922 11 N -0.359 5.359 12 C 0.299 3.701 13 O -0.447 6.447 14 C -0.043 4.043 15 O -0.216 6.216 16 C 0.131 3.869 17 C -0.197 4.197 18 C -0.185 4.185 19 O -0.358 6.358 20 Si 0.685 3.315 21 C -0.059 4.059 22 C -0.256 4.256 23 C 0.119 3.881 24 O -0.243 6.243 25 C -0.078 4.078 26 C -0.270 4.270 27 C -0.148 4.148 28 C -0.151 4.151 29 H 0.264 0.736 30 H 0.103 0.897 31 H 0.112 0.888 32 H 0.091 0.909 33 H 0.070 0.930 34 H 0.066 0.934 35 H 0.110 0.890 36 H 0.260 0.740 37 H 0.143 0.857 38 H 0.137 0.863 39 H 0.115 0.885 40 H 0.230 0.770 41 H -0.237 1.237 42 H -0.188 1.188 43 H 0.173 0.827 44 H 0.175 0.825 45 H 0.135 0.865 46 H 0.089 0.911 47 H 0.085 0.915 48 H 0.172 0.828 49 H 0.119 0.881 50 H 0.104 0.896 51 H 0.104 0.896 52 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges 7.031 6.166 2.655 9.721 hybrid contribution -0.290 0.369 -1.049 1.149 sum 6.741 6.535 1.606 9.525 Atomic orbital electron populations 1.25859 0.96996 0.99182 0.96843 1.23271 0.95201 1.02071 1.03128 1.19325 0.84071 1.00000 0.87378 1.87968 1.22699 1.84765 1.36662 1.22310 0.79418 0.97143 0.97855 0.89120 1.21972 0.95390 0.98265 1.01950 1.21798 0.95070 1.02555 0.96376 1.21021 0.79110 0.99359 0.96540 0.92227 1.45710 1.07711 1.08093 1.74351 1.20495 0.89772 0.83985 0.75831 1.90784 1.68709 1.35108 1.50073 1.22754 0.91790 0.83230 1.06541 1.86225 1.20166 1.27560 1.87643 1.18583 0.81665 0.93289 0.93403 1.19603 0.94894 0.92701 1.12549 1.25159 1.00120 1.05119 0.88143 1.86653 1.37846 1.94222 1.17038 0.94131 0.77471 0.71736 0.88175 1.20942 0.90542 1.00294 0.94101 1.21399 1.01951 0.90972 1.11308 1.18870 0.89562 0.87058 0.92646 1.86054 1.18980 1.31681 1.87557 1.23405 0.77115 1.04775 1.02525 1.20556 0.91223 0.99696 1.15561 1.21714 0.94375 0.95583 1.03169 1.21531 0.95416 1.03439 0.94734 0.73579 0.89745 0.88812 0.90879 0.92974 0.93357 0.89046 0.73993 0.85676 0.86264 0.88527 0.77025 1.23739 1.18773 0.82747 0.82518 0.86514 0.91098 0.91501 0.82799 0.88129 0.89582 0.89614 0.92443 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.58 19.25 74.32 1.43 0.85 16 2 C -0.24 -1.38 13.73 31.13 0.43 -0.95 16 3 C 0.17 0.23 6.22 70.18 0.44 0.67 16 4 O -0.40 -1.92 9.95 -148.98 -1.48 -3.40 16 5 C 0.09 -0.11 2.61 30.60 0.08 -0.03 16 6 H 0.09 -0.56 7.79 -2.39 -0.02 -0.57 16 7 C -0.14 -0.11 5.54 30.60 0.17 0.06 16 8 C -0.12 0.06 5.49 30.59 0.17 0.23 16 9 C 0.14 -0.11 2.45 44.99 0.11 0.00 16 10 H 0.06 0.39 7.58 -2.39 -0.02 0.37 16 11 N -0.70 2.30 5.08 -442.54 -2.25 0.05 16 12 C 0.51 2.45 7.87 87.66 0.69 3.14 16 13 O -0.57 -9.70 16.16 16.01 0.26 -9.44 16 14 C 0.03 -0.01 5.22 71.24 0.37 0.36 16 15 O -0.30 -2.60 8.99 -73.35 -0.66 -3.26 16 16 C 0.18 0.99 6.66 22.49 0.15 1.14 16 17 C -0.20 -0.89 5.27 -19.75 -0.10 -1.00 16 18 C -0.08 -0.51 2.37 71.24 0.17 -0.34 16 19 O -0.55 -5.82 12.88 -148.98 -1.92 -7.74 16 20 Si 0.78 0.84 30.25 68.60 2.08 2.92 16 21 C -0.04 0.00 8.65 22.24 0.19 0.20 16 22 C -0.24 0.26 9.04 22.38 0.20 0.46 16 23 C 0.16 0.23 6.68 22.49 0.15 0.38 16 24 O -0.33 -0.11 10.49 -92.38 -0.97 -1.07 16 25 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 26 C -0.25 -0.47 8.97 22.46 0.20 -0.27 16 27 C -0.11 0.70 5.39 30.61 0.17 0.87 16 28 C -0.11 0.26 5.58 30.61 0.17 0.43 16 29 H 0.25 -1.05 7.80 -4.42 -0.03 -1.09 16 30 H 0.08 -0.13 7.87 -2.39 -0.02 -0.15 16 31 H 0.09 -0.31 8.08 -2.38 -0.02 -0.33 16 32 H 0.07 -0.01 7.87 -2.38 -0.02 -0.03 16 33 H 0.05 0.29 8.14 -2.39 -0.02 0.27 16 34 H 0.05 0.25 8.14 -2.39 -0.02 0.23 16 35 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 36 H 0.42 -4.86 8.60 -92.70 -0.80 -5.66 16 37 H 0.13 -0.86 7.66 -2.39 -0.02 -0.88 16 38 H 0.12 -0.69 7.66 -2.39 -0.02 -0.71 16 39 H 0.10 0.94 7.82 -2.39 -0.02 0.92 16 40 H 0.38 1.14 8.70 -74.06 -0.64 0.50 16 41 H -0.31 -2.97 7.11 99.48 0.71 -2.26 16 42 H -0.26 -0.31 6.67 99.48 0.66 0.35 16 43 H 0.16 -0.65 4.85 -2.92 -0.01 -0.66 16 44 H 0.16 -0.99 6.29 -2.91 -0.02 -1.01 16 45 H 0.12 -1.14 8.14 -2.39 -0.02 -1.16 16 46 H 0.07 -0.63 7.66 -2.39 -0.02 -0.64 16 47 H 0.07 -0.56 7.66 -2.39 -0.02 -0.57 16 48 H 0.15 -0.43 6.30 -2.91 -0.02 -0.45 16 49 H 0.10 -1.13 8.14 -2.39 -0.02 -1.15 16 50 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 51 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 52 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 Total: 0.00 -31.62 429.74 0.85 -30.76 By element: Atomic # 1 Polarization: -15.52 SS G_CDS: -0.50 Total: -16.02 kcal Atomic # 6 Polarization: 0.91 SS G_CDS: 6.29 Total: 7.21 kcal Atomic # 7 Polarization: 2.30 SS G_CDS: -2.25 Total: 0.05 kcal Atomic # 8 Polarization: -20.15 SS G_CDS: -4.77 Total: -24.92 kcal Atomic # 14 Polarization: 0.84 SS G_CDS: 2.08 Total: 2.92 kcal Total: -31.62 0.85 -30.76 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_4974312.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.058 kcal (2) G-P(sol) polarization free energy of solvation -31.616 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.674 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.854 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.762 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.820 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds