Wall clock time and date at job start Tue Mar 9 2021 13:06:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17402 * 1 3 3 C 1.47195 * 179.97438 * 2 1 4 4 O 1.42900 * 109.47150 * 71.02812 * 3 2 1 5 5 C 1.42904 * 113.99820 * 179.97438 * 4 3 2 6 6 H 1.08998 * 109.47445 * 30.00121 * 5 4 3 7 7 C 1.53007 * 109.47159 * 149.99555 * 5 4 3 8 8 C 1.52995 * 109.47306 * 179.97438 * 7 5 4 9 9 C 1.52996 * 109.47426 * 300.00664 * 8 7 5 10 10 H 1.09002 * 109.46822 * 299.99616 * 9 8 7 11 11 N 1.46498 * 109.47258 * 179.97438 * 9 8 7 12 12 C 1.34779 * 119.99985 * 154.99587 * 11 9 8 13 13 O 1.21697 * 120.00028 * 5.09277 * 12 11 9 14 14 C 1.46668 * 119.99994 * 185.09413 * 12 11 9 15 15 C 1.37887 * 126.22724 * 355.02755 * 14 12 11 16 16 C 1.39882 * 107.09287 * 179.77007 * 15 14 12 17 17 Br 1.89097 * 126.07250 * 180.23819 * 16 15 14 18 18 C 1.35496 * 107.85185 * 0.37980 * 16 15 14 19 19 C 1.50705 * 125.56844 * 179.88408 * 18 16 15 20 20 O 1.42894 * 109.47533 * 65.46809 * 19 18 16 21 21 Si 1.86301 * 109.46855 * 305.46406 * 19 18 16 22 22 N 1.35604 * 108.85842 * 359.61447 * 18 16 15 23 23 C 1.46505 * 125.67423 * 180.24440 * 22 18 16 24 24 C 1.52998 * 109.47384 * 59.99342 * 9 8 7 25 25 C 1.52994 * 109.47381 * 300.00293 * 24 9 8 26 26 H 4.38439 * 5.44433 * 180.02562 * 4 1 2 27 27 H 1.08998 * 109.47465 * 311.02311 * 3 2 1 28 28 H 1.09006 * 109.46781 * 191.02195 * 3 2 1 29 29 H 1.09002 * 109.46951 * 59.99883 * 7 5 4 30 30 H 1.09002 * 109.47054 * 300.00233 * 7 5 4 31 31 H 1.08993 * 109.47404 * 179.97438 * 8 7 5 32 32 H 1.09002 * 109.46807 * 60.00290 * 8 7 5 33 33 H 0.96997 * 120.00120 * 334.99779 * 11 9 8 34 34 H 1.07998 * 126.44958 * 0.03332 * 15 14 12 35 35 H 1.09005 * 109.47092 * 185.46756 * 19 18 16 36 36 H 0.96700 * 113.99925 * 300.00071 * 20 19 18 37 37 H 1.48504 * 109.99767 * 174.99785 * 21 19 18 38 38 H 1.48502 * 110.00267 * 296.31196 * 21 19 18 39 39 H 1.08995 * 109.46932 * 95.63135 * 23 22 18 40 40 H 1.08993 * 109.47016 * 215.63098 * 23 22 18 41 41 H 1.09003 * 109.47208 * 335.62967 * 23 22 18 42 42 H 1.09002 * 109.46917 * 60.00332 * 24 9 8 43 43 H 1.09002 * 109.47017 * 179.97438 * 24 9 8 44 44 H 1.09002 * 109.47127 * 299.99911 * 25 24 9 45 45 H 1.09003 * 109.47368 * 179.97438 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1225 -0.4371 -1.2741 5 6 4.5471 -0.4726 -1.3809 6 1 4.9799 -0.6789 -0.4021 7 6 4.9577 -1.5726 -2.3621 8 6 6.4829 -1.6101 -2.4770 9 6 6.9896 -0.2587 -2.9845 10 1 6.5566 -0.0527 -3.9634 11 7 8.4501 -0.2945 -3.0940 12 6 9.0819 0.5291 -3.9536 13 8 8.4494 1.3659 -4.5707 14 6 10.5316 0.4169 -4.1454 15 6 11.3840 -0.4130 -3.4483 16 6 12.6702 -0.2016 -3.9560 17 35 14.2494 -1.0713 -3.3854 18 6 12.5839 0.7394 -4.9272 19 6 13.7377 1.2704 -5.7383 20 8 14.2699 0.2232 -6.5520 21 14 15.0640 1.9013 -4.5922 22 7 11.2888 1.1208 -5.0541 23 6 10.7802 2.1165 -6.0008 24 6 6.5790 0.8412 -2.0035 25 6 5.0539 0.8788 -1.8886 26 1 -1.0499 0.0001 -0.0002 27 1 3.0097 -0.6737 0.7753 28 1 3.0088 1.0096 0.1965 29 1 4.5250 -1.3663 -3.3410 30 1 4.5964 -2.5353 -2.0006 31 1 6.7755 -2.3940 -3.1755 32 1 6.9160 -1.8162 -1.4981 33 1 8.9624 -0.9110 -2.5478 34 1 11.1096 -1.1001 -2.6616 35 1 13.3903 2.0842 -6.3749 36 1 14.5987 -0.5357 -6.0510 37 1 16.2561 2.3162 -5.3746 38 1 14.5497 3.0495 -3.8033 39 1 10.4119 1.6130 -6.8946 40 1 9.9674 2.6760 -5.5380 41 1 11.5830 2.8012 -6.2742 42 1 7.0121 0.6351 -1.0246 43 1 6.9405 1.8039 -2.3649 44 1 4.6208 1.0849 -2.8675 45 1 4.7613 1.6621 -1.1893 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14940684_5000100.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:34 Heat of formation + Delta-G solvation = -5.961918 kcal Electronic energy + Delta-G solvation = -28532.024826 eV Core-core repulsion = 24371.884002 eV Total energy + Delta-G solvation = -4160.140824 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.072 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.89354 -40.99556 -39.84428 -38.03873 -37.78188 -35.33178 -34.44762 -33.92974 -32.34856 -31.87642 -31.11833 -29.85577 -27.85522 -27.44998 -26.71137 -23.98609 -23.66056 -22.74564 -21.44313 -21.22556 -20.48397 -19.40446 -19.03598 -18.25596 -17.88931 -17.44910 -17.25042 -16.67074 -16.65617 -16.33375 -15.90455 -15.68229 -15.57126 -15.00939 -14.95366 -14.83364 -14.60936 -14.37763 -14.29385 -14.13236 -13.86152 -13.76864 -13.47429 -13.26363 -13.22628 -12.67783 -12.61507 -12.39053 -12.36275 -12.16483 -12.00387 -11.86486 -11.70700 -11.56322 -11.33392 -11.29824 -11.12709 -10.88450 -10.45959 -10.18939 -9.84473 -9.34537 -5.00941 0.12865 0.48114 0.90433 1.15037 1.44742 1.49878 1.55853 1.78541 1.84188 2.14210 2.23040 2.88235 3.15384 3.38742 3.50363 3.53378 3.61684 3.65497 3.72145 3.83827 4.01670 4.08386 4.10385 4.16449 4.23096 4.24227 4.30209 4.37433 4.38322 4.45069 4.46975 4.53109 4.59057 4.69299 4.80663 4.92070 5.01626 5.04546 5.11688 5.14455 5.23664 5.26215 5.30676 5.44890 5.57156 5.75039 6.20278 6.36405 6.41239 6.56687 7.05357 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.236 4.236 3 C 0.168 3.832 4 O -0.400 6.400 5 C 0.088 3.912 6 H 0.089 0.911 7 C -0.112 4.112 8 C -0.113 4.113 9 C 0.149 3.851 10 H 0.066 0.934 11 N -0.697 5.697 12 C 0.590 3.410 13 O -0.578 6.578 14 C -0.056 4.056 15 C -0.091 4.091 16 C -0.184 4.184 17 Br 0.036 6.964 18 C 0.048 3.952 19 C -0.053 4.053 20 O -0.540 6.540 21 Si 0.715 3.285 22 N -0.398 5.398 23 C 0.060 3.940 24 C -0.119 4.119 25 C -0.136 4.136 26 H 0.247 0.753 27 H 0.093 0.907 28 H 0.085 0.915 29 H 0.059 0.941 30 H 0.084 0.916 31 H 0.087 0.913 32 H 0.098 0.902 33 H 0.419 0.581 34 H 0.189 0.811 35 H 0.121 0.879 36 H 0.389 0.611 37 H -0.264 1.264 38 H -0.278 1.278 39 H 0.085 0.915 40 H 0.097 0.903 41 H 0.102 0.898 42 H 0.087 0.913 43 H 0.050 0.950 44 H 0.055 0.945 45 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.495 -4.134 5.496 7.037 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C -0.236 4.236 3 C 0.092 3.908 4 O -0.320 6.320 5 C 0.031 3.969 6 H 0.107 0.893 7 C -0.150 4.150 8 C -0.150 4.150 9 C 0.045 3.955 10 H 0.085 0.915 11 N -0.348 5.348 12 C 0.378 3.622 13 O -0.459 6.459 14 C -0.170 4.170 15 C -0.118 4.118 16 C -0.269 4.269 17 Br 0.120 6.880 18 C -0.074 4.074 19 C -0.163 4.163 20 O -0.347 6.347 21 Si 0.616 3.384 22 N -0.071 5.071 23 C -0.080 4.080 24 C -0.158 4.158 25 C -0.174 4.174 26 H 0.264 0.736 27 H 0.111 0.889 28 H 0.102 0.898 29 H 0.078 0.922 30 H 0.103 0.897 31 H 0.106 0.894 32 H 0.117 0.883 33 H 0.257 0.743 34 H 0.206 0.794 35 H 0.138 0.862 36 H 0.239 0.761 37 H -0.189 1.189 38 H -0.204 1.204 39 H 0.104 0.896 40 H 0.115 0.885 41 H 0.121 0.879 42 H 0.105 0.895 43 H 0.069 0.931 44 H 0.073 0.927 45 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 1.667 -2.593 4.603 5.540 hybrid contribution -0.924 0.578 -0.518 1.207 sum 0.743 -2.016 4.085 4.615 Atomic orbital electron populations 1.25854 0.96993 0.99403 0.96685 1.23273 0.95199 1.01960 1.03185 1.19317 0.84044 1.00949 0.86446 1.87968 1.22718 1.87837 1.33492 1.22327 0.79395 0.94856 1.00280 0.89324 1.21510 0.95309 0.98731 0.99435 1.21717 0.94437 0.95072 1.03809 1.21047 0.78406 0.96592 0.99497 0.91543 1.45558 1.07849 1.40026 1.41385 1.17008 0.84861 0.80900 0.79442 1.90815 1.68139 1.36883 1.50081 1.20197 0.92394 1.03681 1.00734 1.21554 0.89370 0.99894 1.00974 1.20848 0.94622 1.06164 1.05304 1.96614 1.27819 1.74287 1.89310 1.21080 0.85704 1.00154 1.00436 1.24833 0.97374 0.94219 0.99880 1.86513 1.81187 1.31186 1.35858 0.93156 0.77249 0.86408 0.81554 1.43966 1.05442 1.30309 1.27413 1.22434 1.01919 0.91128 0.92529 1.21795 0.95020 0.98609 1.00366 1.21957 0.95343 0.98120 1.02019 0.73622 0.88893 0.89768 0.92188 0.89710 0.89449 0.88344 0.74283 0.79358 0.86169 0.76110 1.18933 1.20354 0.89648 0.88478 0.87937 0.89464 0.93102 0.92651 0.91053 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.46 19.25 74.32 1.43 0.98 16 2 C -0.24 -1.19 13.73 31.12 0.43 -0.76 16 3 C 0.17 0.09 6.22 70.18 0.44 0.53 16 4 O -0.40 -1.44 9.95 -148.98 -1.48 -2.92 16 5 C 0.09 -0.22 2.61 30.60 0.08 -0.14 16 6 H 0.09 -0.61 7.79 -2.39 -0.02 -0.63 16 7 C -0.11 0.42 5.57 30.60 0.17 0.59 16 8 C -0.11 0.86 5.39 30.59 0.16 1.02 16 9 C 0.15 -0.40 2.42 44.99 0.11 -0.29 16 10 H 0.07 0.21 7.66 -2.39 -0.02 0.19 16 11 N -0.70 2.48 5.06 -446.51 -2.26 0.22 16 12 C 0.59 2.11 7.73 86.44 0.67 2.78 16 13 O -0.58 -6.28 14.44 -4.34 -0.06 -6.34 16 14 C -0.06 -0.13 6.88 40.35 0.28 0.15 16 15 C -0.09 0.21 10.34 22.58 0.23 0.45 16 16 C -0.18 0.11 6.05 22.03 0.13 0.24 16 17 Br 0.04 -0.15 29.40 -20.37 -0.60 -0.75 16 18 C 0.05 0.10 5.48 41.34 0.23 0.32 16 19 C -0.05 -0.07 2.82 71.24 0.20 0.13 16 20 O -0.54 -1.37 12.88 -148.98 -1.92 -3.28 16 21 Si 0.72 0.77 29.63 68.60 2.03 2.80 16 22 N -0.40 -1.38 3.16 -519.61 -1.64 -3.03 16 23 C 0.06 0.09 10.27 127.77 1.31 1.40 16 24 C -0.12 0.25 5.49 30.59 0.17 0.42 16 25 C -0.14 0.13 5.54 30.59 0.17 0.30 16 26 H 0.25 -1.20 7.80 -4.42 -0.03 -1.24 16 27 H 0.09 -0.36 8.09 -2.39 -0.02 -0.38 16 28 H 0.08 -0.20 7.87 -2.38 -0.02 -0.22 16 29 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 30 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 31 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 32 H 0.10 -1.17 8.14 -2.39 -0.02 -1.19 16 33 H 0.42 -4.22 7.50 -92.71 -0.70 -4.92 16 34 H 0.19 -1.83 7.45 -2.91 -0.02 -1.85 16 35 H 0.12 0.01 6.33 -2.38 -0.02 0.00 16 36 H 0.39 -1.00 7.22 -74.06 -0.53 -1.54 16 37 H -0.26 -1.50 7.11 99.48 0.71 -0.79 16 38 H -0.28 -1.72 7.11 99.48 0.71 -1.02 16 39 H 0.08 0.10 8.14 -2.39 -0.02 0.08 16 40 H 0.10 0.39 6.54 -2.39 -0.02 0.37 16 41 H 0.10 -0.28 6.67 -2.39 -0.02 -0.30 16 42 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 43 H 0.05 0.17 8.09 -2.39 -0.02 0.15 16 44 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 45 H 0.07 -0.10 7.87 -2.39 -0.02 -0.12 16 Total: 0.00 -20.25 388.39 0.11 -20.14 By element: Atomic # 1 Polarization: -14.80 SS G_CDS: -0.17 Total: -14.97 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: 6.21 Total: 8.13 kcal Atomic # 7 Polarization: 1.10 SS G_CDS: -3.90 Total: -2.80 kcal Atomic # 8 Polarization: -9.08 SS G_CDS: -3.46 Total: -12.54 kcal Atomic # 14 Polarization: 0.77 SS G_CDS: 2.03 Total: 2.80 kcal Atomic # 35 Polarization: -0.15 SS G_CDS: -0.60 Total: -0.75 kcal Total: -20.25 0.11 -20.14 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_5000100.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.176 kcal (2) G-P(sol) polarization free energy of solvation -20.246 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.070 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.108 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.137 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.962 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds