Wall clock time and date at job start Tue Mar 9 2021 13:07:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17390 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 O 1.42901 * 109.47175 * 143.67379 * 3 2 1 5 5 C 1.42894 * 114.00382 * 180.02562 * 4 3 2 6 6 H 1.09003 * 109.47228 * 329.99696 * 5 4 3 7 7 C 1.52997 * 109.47281 * 89.99967 * 5 4 3 8 8 C 1.53001 * 109.47152 * 180.02562 * 7 5 4 9 9 C 1.52998 * 109.47303 * 299.99902 * 8 7 5 10 10 H 1.09003 * 109.46641 * 300.00266 * 9 8 7 11 11 N 1.46500 * 109.47359 * 180.02562 * 9 8 7 12 12 C 1.34775 * 120.00045 * 84.99930 * 11 9 8 13 13 O 1.21284 * 119.99824 * 0.02562 * 12 11 9 14 14 C 1.50698 * 119.99895 * 180.02562 * 12 11 9 15 15 N 1.46501 * 109.46897 * 180.02562 * 14 12 11 16 16 C 1.36838 * 125.05911 * 264.99496 * 15 14 12 17 17 C 1.34235 * 109.93691 * 180.02562 * 16 15 14 18 18 C 1.50701 * 126.50273 * 180.02562 * 17 16 15 19 19 O 1.42901 * 109.47080 * 104.97264 * 18 17 16 20 20 Si 1.86299 * 109.46634 * 344.97559 * 18 17 16 21 21 C 1.46490 * 107.00215 * 0.02562 * 17 16 15 22 22 C 1.39597 * 134.04506 * 180.02562 * 21 17 16 23 23 C 1.36661 * 119.76503 * 179.75449 * 22 21 17 24 24 C 1.38785 * 120.53167 * 0.47938 * 23 22 21 25 25 C 1.37797 * 120.66211 * 359.49774 * 24 23 22 26 26 C 1.37689 * 125.06780 * 84.99953 * 15 14 12 27 27 C 1.53003 * 109.47213 * 59.99821 * 9 8 7 28 28 C 1.53001 * 109.47132 * 300.00284 * 27 9 8 29 29 H 4.38447 * 5.44566 * 180.02562 * 4 1 2 30 30 H 1.09000 * 109.47683 * 23.67369 * 3 2 1 31 31 H 1.08993 * 109.47352 * 263.67107 * 3 2 1 32 32 H 1.09000 * 109.46901 * 300.00053 * 7 5 4 33 33 H 1.08998 * 109.47310 * 60.00184 * 7 5 4 34 34 H 1.09006 * 109.47514 * 179.97438 * 8 7 5 35 35 H 1.09003 * 109.47489 * 59.99648 * 8 7 5 36 36 H 0.96997 * 119.99582 * 264.99521 * 11 9 8 37 37 H 1.08997 * 109.47456 * 60.00376 * 14 12 11 38 38 H 1.08997 * 109.47099 * 299.99578 * 14 12 11 39 39 H 1.07992 * 125.03174 * 359.97438 * 16 15 14 40 40 H 1.08999 * 109.47232 * 224.97471 * 18 17 16 41 41 H 0.96700 * 114.00454 * 300.00007 * 19 18 17 42 42 H 1.48503 * 109.99683 * 180.02562 * 20 18 17 43 43 H 1.48502 * 110.00088 * 301.31915 * 20 18 17 44 44 H 1.07997 * 120.10936 * 359.97438 * 22 21 17 45 45 H 1.08002 * 119.73315 * 180.23224 * 23 22 21 46 46 H 1.08002 * 119.67131 * 179.78029 * 24 23 22 47 47 H 1.07998 * 120.10584 * 180.28277 * 25 24 23 48 48 H 1.08998 * 109.47052 * 60.00172 * 27 9 8 49 49 H 1.09000 * 109.47178 * 180.02562 * 27 9 8 50 50 H 1.09001 * 109.47017 * 179.97438 * 28 27 9 51 51 H 1.08998 * 109.47060 * 299.99883 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 8 3.1218 1.0863 -0.7981 5 6 4.5462 1.1776 -0.8655 6 1 4.9792 0.7903 0.0569 7 6 5.0544 0.3558 -2.0517 8 6 6.5797 0.4530 -2.1235 9 6 6.9896 1.9160 -2.3036 10 1 6.5570 2.3036 -3.2260 11 7 8.4500 2.0091 -2.3729 12 6 9.0821 1.8218 -3.5483 13 8 8.4419 1.5768 -4.5489 14 6 10.5844 1.9170 -3.6195 15 7 11.0243 1.6765 -4.9960 16 6 11.4326 0.4679 -5.4909 17 6 11.7684 0.5928 -6.7846 18 6 12.2667 -0.5030 -7.6913 19 8 11.2221 -0.8940 -8.5845 20 14 12.7880 -1.9683 -6.6658 21 6 11.5585 1.9963 -7.1480 22 6 11.7255 2.7298 -8.3240 23 6 11.4282 4.0635 -8.3397 24 6 10.9708 4.6975 -7.1929 25 6 10.7984 3.9926 -6.0215 26 6 11.0885 2.6329 -5.9845 27 6 6.4814 2.7379 -1.1173 28 6 4.9561 2.6407 -1.0456 29 1 -1.0502 -0.0001 0.0003 30 1 3.0098 -0.9403 -0.4126 31 1 3.0092 0.1141 1.0213 32 1 4.7628 -0.6865 -1.9232 33 1 4.6216 0.7431 -2.9741 34 1 6.9418 -0.1328 -2.9684 35 1 7.0123 0.0655 -1.2011 36 1 8.9619 2.2055 -1.5727 37 1 11.0274 1.1703 -2.9605 38 1 10.9007 2.9118 -3.3060 39 1 11.4788 -0.4504 -4.9244 40 1 13.1189 -0.1398 -8.2657 41 1 10.4303 -1.2284 -8.1414 42 1 13.2821 -3.0558 -7.5482 43 1 13.8518 -1.5672 -5.7105 44 1 12.0849 2.2440 -9.2190 45 1 11.5539 4.6297 -9.2508 46 1 10.7434 5.7529 -7.2200 47 1 10.4376 4.4940 -5.1356 48 1 6.9139 2.3503 -0.1949 49 1 6.7730 3.7802 -1.2459 50 1 4.5941 3.2258 -0.2002 51 1 4.5236 3.0282 -1.9680 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14940684_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:09 Heat of formation + Delta-G solvation = 10.879713 kcal Electronic energy + Delta-G solvation = -32801.585710 eV Core-core repulsion = 28441.777156 eV Total energy + Delta-G solvation = -4359.808554 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.177 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.48407 -41.16647 -39.99198 -38.12069 -37.89755 -37.42199 -35.12499 -34.12175 -33.82122 -32.03495 -31.49763 -30.21545 -30.08739 -28.68199 -27.64398 -25.69558 -24.02999 -23.76034 -23.27716 -22.43724 -21.66575 -21.23846 -20.55412 -19.41791 -18.63851 -18.41116 -17.98371 -17.74226 -17.36601 -16.92282 -16.74678 -16.39472 -16.30699 -16.25171 -15.85566 -15.45501 -15.34148 -15.16899 -14.97354 -14.71808 -14.58313 -14.47572 -14.31473 -13.95180 -13.92417 -13.62011 -13.57541 -13.41850 -13.30469 -12.77442 -12.59784 -12.45119 -12.42989 -12.31770 -12.10955 -12.01034 -11.92848 -11.75371 -11.67173 -11.39623 -11.31592 -11.07196 -10.50849 -10.41322 -10.21828 -10.20495 -9.01938 -8.52300 -5.01562 0.28156 0.79896 1.38695 1.39018 1.40770 1.52188 1.67862 1.73413 1.84855 2.03430 2.09996 2.81838 3.11809 3.38438 3.41376 3.47276 3.52278 3.60264 3.66208 3.76534 3.81014 3.86164 3.87180 3.97279 3.99092 4.07386 4.09058 4.19029 4.23717 4.27427 4.31703 4.35951 4.37485 4.47848 4.58113 4.62619 4.71681 4.79342 4.79678 4.85853 4.90781 4.95853 4.96331 4.99031 5.01271 5.11085 5.15038 5.25725 5.31652 5.64991 5.81199 5.86636 5.90400 6.10279 6.15386 6.31708 6.37212 6.61179 6.78744 7.00532 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.200 4.200 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.090 3.910 6 H 0.065 0.935 7 C -0.140 4.140 8 C -0.125 4.125 9 C 0.143 3.857 10 H 0.092 0.908 11 N -0.726 5.726 12 C 0.492 3.508 13 O -0.510 6.510 14 C 0.091 3.909 15 N -0.466 5.466 16 C 0.068 3.932 17 C -0.198 4.198 18 C -0.029 4.029 19 O -0.542 6.542 20 Si 0.682 3.318 21 C -0.087 4.087 22 C -0.066 4.066 23 C -0.146 4.146 24 C -0.097 4.097 25 C -0.128 4.128 26 C 0.109 3.891 27 C -0.123 4.123 28 C -0.113 4.113 29 H 0.223 0.777 30 H 0.074 0.926 31 H 0.074 0.926 32 H 0.070 0.930 33 H 0.076 0.924 34 H 0.073 0.927 35 H 0.066 0.934 36 H 0.401 0.599 37 H 0.123 0.877 38 H 0.117 0.883 39 H 0.170 0.830 40 H 0.110 0.890 41 H 0.377 0.623 42 H -0.254 1.254 43 H -0.256 1.256 44 H 0.122 0.878 45 H 0.123 0.877 46 H 0.125 0.875 47 H 0.114 0.886 48 H 0.072 0.928 49 H 0.078 0.922 50 H 0.078 0.922 51 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.352 -0.373 8.363 8.379 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C -0.200 4.200 3 C 0.098 3.902 4 O -0.295 6.295 5 C 0.032 3.968 6 H 0.083 0.917 7 C -0.178 4.178 8 C -0.164 4.164 9 C 0.039 3.961 10 H 0.110 0.890 11 N -0.379 5.379 12 C 0.275 3.725 13 O -0.384 6.384 14 C -0.035 4.035 15 N -0.149 5.149 16 C -0.056 4.056 17 C -0.205 4.205 18 C -0.141 4.141 19 O -0.347 6.347 20 Si 0.584 3.416 21 C -0.091 4.091 22 C -0.084 4.084 23 C -0.165 4.165 24 C -0.116 4.116 25 C -0.148 4.148 26 C 0.005 3.995 27 C -0.161 4.161 28 C -0.151 4.151 29 H 0.239 0.761 30 H 0.092 0.908 31 H 0.092 0.908 32 H 0.088 0.912 33 H 0.095 0.905 34 H 0.092 0.908 35 H 0.085 0.915 36 H 0.236 0.764 37 H 0.141 0.859 38 H 0.135 0.865 39 H 0.187 0.813 40 H 0.127 0.873 41 H 0.224 0.776 42 H -0.179 1.179 43 H -0.181 1.181 44 H 0.140 0.860 45 H 0.141 0.859 46 H 0.143 0.857 47 H 0.132 0.868 48 H 0.091 0.909 49 H 0.096 0.904 50 H 0.096 0.904 51 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 0.793 -0.747 7.623 7.700 hybrid contribution 0.216 0.471 0.426 0.671 sum 1.009 -0.276 8.049 8.116 Atomic orbital electron populations 1.25061 0.95992 0.98256 0.99178 1.22497 0.93892 1.02030 1.01608 1.19108 0.84867 0.90838 0.95388 1.88001 1.21223 1.49520 1.70735 1.22188 0.80428 0.96339 0.97828 0.91652 1.22010 0.95172 1.00831 0.99828 1.21862 0.95432 0.96371 1.02726 1.21075 0.79119 0.95766 1.00120 0.88992 1.46029 1.07940 1.73224 1.10686 1.20998 0.90328 0.77415 0.83720 1.90821 1.67211 1.45804 1.34558 1.21595 0.92608 1.06068 0.83264 1.43195 1.56170 1.07413 1.08155 1.21493 1.01157 0.88547 0.94416 1.20646 1.11476 0.94337 0.94082 1.24328 0.93334 1.00583 0.95828 1.86490 1.27774 1.85426 1.35018 0.95265 0.86349 0.78579 0.81429 1.18945 1.04202 0.92707 0.93230 1.20308 0.98313 0.93530 0.96274 1.20668 1.02559 0.94714 0.98526 1.20826 0.99108 0.99572 0.92087 1.19952 1.05231 0.90524 0.99140 1.18159 1.02517 0.90875 0.87996 1.21768 0.95616 1.00827 0.97848 1.21516 0.94418 0.95159 1.04045 0.76058 0.90813 0.90791 0.91178 0.90510 0.90819 0.91513 0.76446 0.85950 0.86523 0.81255 0.87260 0.77553 1.17894 1.18051 0.85993 0.85946 0.85737 0.86758 0.90943 0.90360 0.90356 0.90441 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.18 19.25 29.55 0.57 0.39 16 2 C -0.20 -0.42 13.73 -37.12 -0.51 -0.93 16 3 C 0.17 0.00 6.22 34.37 0.21 0.22 16 4 O -0.38 -0.52 9.95 -35.23 -0.35 -0.87 16 5 C 0.09 -0.13 2.61 -26.73 -0.07 -0.20 16 6 H 0.07 -0.19 7.79 -51.93 -0.40 -0.60 16 7 C -0.14 0.18 5.54 -26.73 -0.15 0.03 16 8 C -0.13 0.26 5.49 -26.73 -0.15 0.11 16 9 C 0.14 -0.32 2.45 -67.93 -0.17 -0.48 16 10 H 0.09 0.05 7.58 -51.93 -0.39 -0.34 16 11 N -0.73 2.53 5.08 -53.80 -0.27 2.25 16 12 C 0.49 -0.36 7.86 -10.99 -0.09 -0.45 16 13 O -0.51 -2.20 16.08 5.55 0.09 -2.12 16 14 C 0.09 -0.26 6.48 -5.19 -0.03 -0.30 16 15 N -0.47 -0.46 2.27 -115.71 -0.26 -0.72 16 16 C 0.07 0.04 9.89 -16.73 -0.17 -0.13 16 17 C -0.20 -0.48 5.57 -102.71 -0.57 -1.05 16 18 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 19 O -0.54 -1.31 12.88 -35.23 -0.45 -1.77 16 20 Si 0.68 -0.33 30.75 -169.99 -5.23 -5.56 16 21 C -0.09 -0.38 6.35 -105.13 -0.67 -1.04 16 22 C -0.07 -0.26 10.05 -39.64 -0.40 -0.66 16 23 C -0.15 -0.42 9.97 -39.95 -0.40 -0.82 16 24 C -0.10 -0.23 10.01 -39.54 -0.40 -0.63 16 25 C -0.13 -0.34 10.00 -39.43 -0.39 -0.73 16 26 C 0.11 0.37 6.80 -83.99 -0.57 -0.20 16 27 C -0.12 0.46 5.39 -26.73 -0.14 0.31 16 28 C -0.11 0.23 5.57 -26.73 -0.15 0.08 16 29 H 0.22 -0.52 7.80 -54.08 -0.42 -0.94 16 30 H 0.07 -0.11 7.87 -51.93 -0.41 -0.52 16 31 H 0.07 -0.14 8.08 -51.93 -0.42 -0.56 16 32 H 0.07 -0.10 7.87 -51.93 -0.41 -0.51 16 33 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 36 H 0.40 -2.65 8.60 -40.82 -0.35 -3.00 16 37 H 0.12 -0.76 8.12 -51.93 -0.42 -1.19 16 38 H 0.12 -0.56 8.14 -51.93 -0.42 -0.99 16 39 H 0.17 -0.52 6.34 -52.49 -0.33 -0.85 16 40 H 0.11 0.23 7.96 -51.93 -0.41 -0.18 16 41 H 0.38 -0.40 8.70 45.56 0.40 0.00 16 42 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 43 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 44 H 0.12 0.38 8.06 -52.49 -0.42 -0.05 16 45 H 0.12 0.12 8.06 -52.49 -0.42 -0.31 16 46 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 47 H 0.11 0.07 8.06 -52.49 -0.42 -0.35 16 48 H 0.07 -0.36 8.14 -51.93 -0.42 -0.78 16 49 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 50 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 51 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 LS Contribution 427.63 15.07 6.44 6.44 Total: 0.00 -11.86 427.63 -12.01 -23.87 By element: Atomic # 1 Polarization: -7.28 SS G_CDS: -7.85 Total: -15.13 kcal Atomic # 6 Polarization: -2.28 SS G_CDS: -4.13 Total: -6.40 kcal Atomic # 7 Polarization: 2.07 SS G_CDS: -0.54 Total: 1.53 kcal Atomic # 8 Polarization: -4.04 SS G_CDS: -0.71 Total: -4.75 kcal Atomic # 14 Polarization: -0.33 SS G_CDS: -5.23 Total: -5.56 kcal Total LS contribution 6.44 Total: 6.44 kcal Total: -11.86 -12.01 -23.87 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.746 kcal (2) G-P(sol) polarization free energy of solvation -11.856 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.890 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.010 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.866 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.880 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds