Wall clock time and date at job start Tue Mar 9 2021 13:07:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 N 1.30272 * 126.28633 * 2 1 4 4 N 1.28672 * 109.38231 * 179.72416 * 3 2 1 5 5 C 1.30276 * 109.37469 * 0.44727 * 4 3 2 6 6 C 1.50708 * 126.27700 * 179.82467 * 5 4 3 7 7 H 1.09002 * 112.84864 * 190.88968 * 6 5 4 8 8 C 1.53778 * 113.61230 * 322.19071 * 6 5 4 9 9 C 1.53782 * 87.08219 * 139.98248 * 8 6 5 10 10 H 1.09007 * 113.68782 * 89.12453 * 9 8 6 11 11 N 1.46492 * 113.61362 * 220.01784 * 9 8 6 12 12 C 1.34774 * 120.00007 * 252.49042 * 11 9 8 13 13 O 1.21284 * 119.99973 * 0.02562 * 12 11 9 14 14 C 1.50701 * 120.00153 * 180.02562 * 12 11 9 15 15 C 1.52995 * 109.47246 * 65.00402 * 14 12 11 16 16 O 1.42900 * 109.47148 * 185.00299 * 14 12 11 17 17 C 1.35905 * 117.00024 * 155.03792 * 16 14 12 18 18 C 1.38730 * 120.05405 * 5.43820 * 17 16 14 19 19 C 1.38146 * 119.94385 * 179.97438 * 18 17 16 20 20 C 1.38259 * 120.05582 * 359.97438 * 19 18 17 21 21 C 1.50701 * 119.94467 * 179.97438 * 20 19 18 22 22 O 1.42898 * 109.47326 * 300.00666 * 21 20 19 23 23 Si 1.86300 * 109.47019 * 180.02562 * 21 20 19 24 24 C 1.38271 * 120.11332 * 0.27784 * 20 19 18 25 25 C 1.38149 * 120.05121 * 359.44783 * 24 20 19 26 26 C 1.53778 * 113.61606 * 59.68663 * 6 5 4 27 27 O 1.34359 * 126.27719 * 179.97438 * 2 1 3 28 28 H 1.08999 * 109.47590 * 270.00727 * 1 2 3 29 29 H 1.09007 * 109.46559 * 30.00436 * 1 2 3 30 30 H 1.09000 * 109.47300 * 149.99872 * 1 2 3 31 31 H 1.08997 * 113.61811 * 25.42907 * 8 6 5 32 32 H 1.09010 * 113.61508 * 254.52790 * 8 6 5 33 33 H 0.96999 * 120.00054 * 72.50320 * 11 9 8 34 34 H 1.08999 * 109.47167 * 305.00044 * 14 12 11 35 35 H 1.08998 * 109.47627 * 179.97438 * 15 14 12 36 36 H 1.09004 * 109.47311 * 299.99865 * 15 14 12 37 37 H 1.08999 * 109.47330 * 59.99742 * 15 14 12 38 38 H 1.08000 * 120.03195 * 359.95768 * 18 17 16 39 39 H 1.08005 * 119.96969 * 180.02562 * 19 18 17 40 40 H 1.08999 * 109.46878 * 60.00529 * 21 20 19 41 41 H 0.96699 * 113.99960 * 299.99328 * 22 21 20 42 42 H 1.48499 * 110.00009 * 58.68766 * 23 21 20 43 43 H 1.48506 * 110.00035 * 180.02562 * 23 21 20 44 44 H 1.07997 * 119.97468 * 179.72312 * 24 20 19 45 45 H 1.07996 * 120.02565 * 180.27459 * 25 24 20 46 46 H 1.09006 * 113.61147 * 105.46949 * 26 6 5 47 47 H 1.09005 * 113.68893 * 334.58447 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2780 1.0501 0.0000 4 7 3.5091 0.6760 0.0058 5 6 3.5653 -0.6256 0.0002 6 6 4.8176 -1.4641 0.0003 7 1 4.6210 -2.5183 -0.1948 8 6 5.9514 -0.8779 -0.8574 9 6 6.9156 -1.3184 0.2567 10 1 7.2948 -2.3327 0.1319 11 7 7.9748 -0.3453 0.5347 12 6 9.2419 -0.6011 0.1536 13 8 9.5053 -1.6367 -0.4200 14 6 10.3316 0.3997 0.4401 15 6 10.5221 0.5271 1.9528 16 8 11.5522 -0.0407 -0.1583 17 6 12.4707 0.9142 -0.4610 18 6 12.2523 2.2319 -0.0863 19 6 13.1876 3.2006 -0.3947 20 6 14.3410 2.8577 -1.0757 21 6 15.3594 3.9165 -1.4113 22 8 14.7547 4.9148 -2.2358 23 14 16.7859 3.1392 -2.3234 24 6 14.5587 1.5459 -1.4548 25 6 13.6290 0.5725 -1.1438 26 6 5.7213 -1.2214 1.2205 27 8 2.3020 -1.0832 0.0005 28 1 -0.3634 0.0001 1.0276 29 1 -0.3633 0.8900 -0.5139 30 1 -0.3634 -0.8900 -0.5138 31 1 5.8914 0.2034 -0.9807 32 1 6.1032 -1.4046 -1.7997 33 1 7.7641 0.4831 0.9933 34 1 10.0530 1.3688 0.0261 35 1 11.3106 1.2506 2.1601 36 1 9.5911 0.8631 2.4093 37 1 10.8008 -0.4419 2.3669 38 1 11.3516 2.5004 0.4458 39 1 13.0182 4.2266 -0.1029 40 1 15.7226 4.3757 -0.4919 41 1 14.4084 4.5766 -3.0729 42 1 16.2988 2.4825 -3.5630 43 1 17.7976 4.1730 -2.6596 44 1 15.4583 1.2812 -1.9906 45 1 13.8015 -0.4527 -1.4362 46 1 5.6873 -2.0253 1.9559 47 1 5.5992 -0.2343 1.6666 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_10157680.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:15 Heat of formation + Delta-G solvation = -2.710948 kcal Electronic energy + Delta-G solvation = -30853.464453 eV Core-core repulsion = 26392.722220 eV Total energy + Delta-G solvation = -4460.742233 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -45.25402 -41.86120 -41.05611 -39.82603 -38.83581 -37.23344 -37.17014 -35.14497 -33.85523 -33.02379 -32.06295 -31.39759 -29.72718 -27.14156 -27.08214 -26.62419 -25.45930 -24.25945 -23.71443 -23.30682 -22.36412 -21.56011 -20.93409 -19.51568 -18.68930 -18.51193 -18.43105 -18.19876 -17.45141 -16.90024 -16.83631 -16.59401 -16.31047 -16.20148 -15.85856 -15.65050 -15.49897 -15.27097 -14.87002 -14.73103 -14.51013 -14.36535 -14.21292 -13.92417 -13.87289 -13.81164 -13.62343 -13.52272 -13.36852 -13.25286 -12.97582 -12.89500 -12.81386 -12.46343 -12.19027 -12.16088 -12.10812 -12.05132 -11.87651 -11.56607 -10.84801 -10.57567 -10.46030 -10.24714 -10.04217 -9.19813 -4.94056 0.08278 0.24729 0.34669 1.13020 1.31169 1.32753 1.41711 1.47732 1.61993 1.98594 2.41950 2.65622 2.70049 3.04318 3.18223 3.33427 3.39235 3.40736 3.49597 3.54721 3.55301 3.71104 3.71927 3.84171 3.85980 3.93053 4.17928 4.20913 4.23816 4.25773 4.28810 4.32771 4.41424 4.44359 4.46535 4.48050 4.56108 4.58058 4.60173 4.64263 4.71828 4.75414 4.88213 4.94269 4.98948 5.18573 5.28970 5.29981 5.47949 5.65854 6.19420 6.35385 6.42128 7.01983 7.28369 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.164 3.836 3 N -0.289 5.289 4 N -0.282 5.282 5 C 0.173 3.827 6 C -0.021 4.021 7 H 0.129 0.871 8 C -0.136 4.136 9 C 0.130 3.870 10 H 0.127 0.873 11 N -0.715 5.715 12 C 0.522 3.478 13 O -0.510 6.510 14 C 0.066 3.934 15 C -0.177 4.177 16 O -0.283 6.283 17 C 0.135 3.865 18 C -0.212 4.212 19 C -0.051 4.051 20 C -0.156 4.156 21 C -0.069 4.069 22 O -0.531 6.531 23 Si 0.681 3.319 24 C -0.075 4.075 25 C -0.142 4.142 26 C -0.130 4.130 27 O -0.225 6.225 28 H 0.101 0.899 29 H 0.108 0.892 30 H 0.094 0.906 31 H 0.104 0.896 32 H 0.088 0.912 33 H 0.405 0.595 34 H 0.101 0.899 35 H 0.079 0.921 36 H 0.080 0.920 37 H 0.077 0.923 38 H 0.132 0.868 39 H 0.129 0.871 40 H 0.117 0.883 41 H 0.376 0.624 42 H -0.260 1.260 43 H -0.257 1.257 44 H 0.134 0.866 45 H 0.137 0.863 46 H 0.092 0.908 47 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.167 -1.719 3.627 5.113 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.047 4.047 3 N -0.136 5.136 4 N -0.128 5.128 5 C -0.038 4.038 6 C -0.042 4.042 7 H 0.147 0.853 8 C -0.175 4.175 9 C 0.025 3.975 10 H 0.145 0.855 11 N -0.368 5.368 12 C 0.306 3.694 13 O -0.384 6.384 14 C 0.006 3.994 15 C -0.235 4.235 16 O -0.196 6.196 17 C 0.090 3.910 18 C -0.230 4.230 19 C -0.069 4.069 20 C -0.157 4.157 21 C -0.179 4.179 22 O -0.338 6.338 23 Si 0.583 3.417 24 C -0.093 4.093 25 C -0.160 4.160 26 C -0.169 4.169 27 O -0.104 6.104 28 H 0.119 0.881 29 H 0.127 0.873 30 H 0.113 0.887 31 H 0.122 0.878 32 H 0.106 0.894 33 H 0.241 0.759 34 H 0.118 0.882 35 H 0.098 0.902 36 H 0.099 0.901 37 H 0.096 0.904 38 H 0.149 0.851 39 H 0.147 0.853 40 H 0.135 0.865 41 H 0.223 0.777 42 H -0.185 1.185 43 H -0.182 1.182 44 H 0.151 0.849 45 H 0.155 0.845 46 H 0.110 0.890 47 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -1.939 -1.095 2.934 3.683 hybrid contribution -1.723 -0.169 -0.382 1.773 sum -3.662 -1.264 2.552 4.639 Atomic orbital electron populations 1.20412 0.79961 1.05980 1.05494 1.28108 0.97965 0.79488 0.99116 1.74444 0.95939 1.25519 1.17683 1.74311 1.12422 1.08973 1.17129 1.27679 0.84698 0.91614 0.99793 1.20991 0.84079 0.98590 1.00492 0.85342 1.23640 0.91869 1.03359 0.98651 1.22386 0.85074 0.94857 0.95155 0.85539 1.45768 1.06902 1.23019 1.61105 1.20124 0.83038 0.87441 0.78754 1.90776 1.82067 1.26030 1.39479 1.22194 0.84024 0.97734 0.95474 1.22356 1.04034 1.04713 0.92384 1.86220 1.24830 1.32716 1.75819 1.19083 0.89858 0.87546 0.94539 1.21331 1.02210 0.92478 1.06998 1.20797 0.92112 0.99138 0.94821 1.20192 0.97867 0.94680 1.02932 1.24942 1.00865 0.92194 0.99923 1.86590 1.78041 1.35379 1.33768 0.95056 0.79216 0.83641 0.83813 1.20838 0.98168 0.92007 0.98242 1.20407 0.92902 1.00934 1.01799 1.23504 0.92710 1.04589 0.96066 1.84791 1.17553 1.38450 1.69605 0.88079 0.87315 0.88703 0.87765 0.89352 0.75948 0.88155 0.90196 0.90146 0.90365 0.85066 0.85258 0.86483 0.77655 1.18472 1.18243 0.84873 0.84470 0.88975 0.88151 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.20 10.51 36.00 0.38 0.58 16 2 C 0.16 0.22 8.48 -12.94 -0.11 0.11 16 3 N -0.29 -1.17 12.22 32.55 0.40 -0.77 16 4 N -0.28 -1.00 11.84 32.55 0.39 -0.62 16 5 C 0.17 0.22 7.53 -12.94 -0.10 0.13 16 6 C -0.02 0.04 4.29 -90.96 -0.39 -0.35 16 7 H 0.13 -0.49 8.14 -51.93 -0.42 -0.91 16 8 C -0.14 0.24 7.42 -25.92 -0.19 0.05 16 9 C 0.13 -0.28 4.24 -67.12 -0.28 -0.57 16 10 H 0.13 -0.16 7.46 -51.93 -0.39 -0.55 16 11 N -0.71 1.52 5.32 -53.02 -0.28 1.24 16 12 C 0.52 0.53 7.18 -10.99 -0.08 0.45 16 13 O -0.51 -2.83 16.11 -14.31 -0.23 -3.06 16 14 C 0.07 -0.04 2.64 -27.88 -0.07 -0.11 16 15 C -0.18 0.46 9.12 37.16 0.34 0.80 16 16 O -0.28 -0.74 9.34 -39.30 -0.37 -1.11 16 17 C 0.14 0.22 6.60 -39.22 -0.26 -0.04 16 18 C -0.21 -0.03 8.24 -39.43 -0.33 -0.35 16 19 C -0.05 -0.02 9.60 -39.61 -0.38 -0.40 16 20 C -0.16 -0.04 5.39 -104.60 -0.56 -0.61 16 21 C -0.07 0.01 2.82 36.01 0.10 0.11 16 22 O -0.53 -0.71 12.77 -35.23 -0.45 -1.16 16 23 Si 0.68 -0.49 29.78 -169.99 -5.06 -5.55 16 24 C -0.07 -0.01 8.66 -39.60 -0.34 -0.35 16 25 C -0.14 -0.18 9.99 -39.43 -0.39 -0.57 16 26 C -0.13 0.42 7.38 -25.92 -0.19 0.23 16 27 O -0.22 -0.37 10.87 5.40 0.06 -0.31 16 28 H 0.10 -0.47 8.14 -51.93 -0.42 -0.89 16 29 H 0.11 -0.44 8.14 -51.92 -0.42 -0.86 16 30 H 0.09 -0.45 8.14 -51.93 -0.42 -0.87 16 31 H 0.10 -0.08 7.78 -51.93 -0.40 -0.48 16 32 H 0.09 -0.15 8.14 -51.92 -0.42 -0.57 16 33 H 0.41 -1.87 8.51 -40.82 -0.35 -2.22 16 34 H 0.10 -0.25 6.31 -51.93 -0.33 -0.58 16 35 H 0.08 -0.22 6.91 -51.93 -0.36 -0.58 16 36 H 0.08 -0.39 7.93 -51.93 -0.41 -0.80 16 37 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 38 H 0.13 -0.27 5.43 -52.49 -0.29 -0.55 16 39 H 0.13 -0.06 8.06 -52.48 -0.42 -0.48 16 40 H 0.12 -0.11 7.96 -51.93 -0.41 -0.52 16 41 H 0.38 -0.48 8.70 45.56 0.40 -0.09 16 42 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 43 H -0.26 -0.68 7.11 56.52 0.40 -0.27 16 44 H 0.13 -0.23 4.87 -52.49 -0.26 -0.48 16 45 H 0.14 0.07 8.06 -52.49 -0.42 -0.35 16 46 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 47 H 0.10 -0.29 8.07 -51.93 -0.42 -0.71 16 LS Contribution 395.61 15.07 5.96 5.96 Total: 0.00 -11.67 395.61 -8.67 -20.34 By element: Atomic # 1 Polarization: -7.86 SS G_CDS: -6.22 Total: -14.08 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -2.86 Total: -0.89 kcal Atomic # 7 Polarization: -0.65 SS G_CDS: 0.50 Total: -0.15 kcal Atomic # 8 Polarization: -4.65 SS G_CDS: -0.99 Total: -5.64 kcal Atomic # 14 Polarization: -0.49 SS G_CDS: -5.06 Total: -5.55 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -11.67 -8.67 -20.34 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_10157680.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.629 kcal (2) G-P(sol) polarization free energy of solvation -11.671 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.958 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.669 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.340 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.711 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds