Wall clock time and date at job start Tue Mar 9 2021 13:07:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 N 1.30271 * 126.28572 * 2 1 4 4 N 1.28665 * 109.38236 * 179.97438 * 3 2 1 5 5 C 1.30278 * 109.38041 * 0.02562 * 4 3 2 6 6 C 1.50698 * 126.27931 * 179.97438 * 5 4 3 7 7 H 1.09000 * 112.84850 * 168.82528 * 6 5 4 8 8 C 1.53788 * 113.61320 * 300.01494 * 6 5 4 9 9 C 1.53777 * 87.07684 * 140.06852 * 8 6 5 10 10 H 1.09008 * 113.61402 * 89.20821 * 9 8 6 11 11 N 1.46503 * 113.61251 * 220.01714 * 9 8 6 12 12 C 1.34778 * 119.99856 * 203.47643 * 11 9 8 13 13 O 1.21690 * 120.00157 * 5.09985 * 12 11 9 14 14 C 1.46680 * 119.99591 * 185.10640 * 12 11 9 15 15 C 1.37872 * 126.23453 * 5.00127 * 14 12 11 16 16 C 1.39837 * 107.08145 * 179.97438 * 15 14 12 17 17 C 1.35455 * 107.86800 * 359.74062 * 16 15 14 18 18 C 1.50706 * 125.56421 * 180.26062 * 17 16 15 19 19 O 1.42893 * 109.46922 * 210.19210 * 18 17 16 20 20 Si 1.86296 * 109.46921 * 330.19445 * 18 17 16 21 21 N 1.35529 * 108.87127 * 0.42566 * 17 16 15 22 22 C 1.46498 * 125.67887 * 179.83161 * 21 17 16 23 23 C 1.53775 * 87.17948 * 334.61151 * 9 8 6 24 24 O 1.34363 * 107.43605 * 0.23131 * 5 4 3 25 25 H 1.09004 * 109.47021 * 89.96792 * 1 2 3 26 26 H 1.09000 * 109.47637 * 209.96898 * 1 2 3 27 27 H 1.08998 * 109.46960 * 329.97274 * 1 2 3 28 28 H 1.08997 * 113.61174 * 25.52394 * 8 6 5 29 29 H 1.08993 * 113.68868 * 254.62634 * 8 6 5 30 30 H 0.96993 * 120.00137 * 23.47692 * 11 9 8 31 31 H 1.07990 * 126.46012 * 0.02562 * 15 14 12 32 32 H 1.08000 * 126.06342 * 180.02562 * 16 15 14 33 33 H 1.08997 * 109.46819 * 90.19599 * 18 17 16 34 34 H 0.96700 * 114.00165 * 179.97438 * 19 18 17 35 35 H 1.48497 * 110.00259 * 299.99686 * 20 18 17 36 36 H 1.48499 * 110.00256 * 61.32177 * 20 18 17 37 37 H 1.09003 * 109.47007 * 264.97585 * 22 21 17 38 38 H 1.08999 * 109.47210 * 144.98362 * 22 21 17 39 39 H 1.08994 * 109.47201 * 24.97610 * 22 21 17 40 40 H 1.08995 * 113.61790 * 139.93641 * 23 9 8 41 41 H 1.08999 * 113.61661 * 270.84640 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2780 1.0501 0.0000 4 7 3.5090 0.6760 0.0005 5 6 3.5653 -0.6256 0.0004 6 6 4.8176 -1.4640 0.0003 7 1 4.6210 -2.5183 0.1948 8 6 5.7216 -1.2208 -1.2198 9 6 6.9157 -1.3204 -0.2560 10 1 7.2939 -2.3353 -0.1326 11 7 7.9761 -0.3481 -0.5329 12 6 9.2372 -0.5919 -0.1248 13 8 9.5145 -1.6588 0.3907 14 6 10.2756 0.4289 -0.3019 15 6 10.0870 1.7091 -0.7777 16 6 11.3378 2.3344 -0.7810 17 6 12.2474 1.4469 -0.3120 18 6 13.7218 1.7094 -0.1432 19 8 14.4457 0.4900 -0.3188 20 14 14.2807 2.9520 -1.4137 21 7 11.6157 0.2833 -0.0229 22 6 12.2521 -0.9262 0.5048 23 6 5.9537 -0.8814 0.8605 24 8 2.3020 -1.0832 -0.0055 25 1 -0.3633 0.0006 -1.0277 26 1 -0.3634 -0.8902 0.5133 27 1 -0.3633 0.8897 0.5142 28 1 5.5999 -0.2326 -1.6633 29 1 5.6875 -2.0229 -1.9570 30 1 7.7705 0.4710 -1.0099 31 1 9.1500 2.1468 -1.0883 32 1 11.5416 3.3469 -1.0966 33 1 13.9088 2.1022 0.8561 34 1 15.4035 0.5841 -0.2242 35 1 14.0312 2.4283 -2.7806 36 1 13.5580 4.2350 -1.2216 37 1 12.4979 -1.5963 -0.3190 38 1 11.5679 -1.4278 1.1892 39 1 13.1639 -0.6545 1.0366 40 1 6.1058 -1.4108 1.8011 41 1 5.8954 0.1996 0.9867 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_10803936.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:22 Heat of formation + Delta-G solvation = 47.883332 kcal Electronic energy + Delta-G solvation = -26040.119957 eV Core-core repulsion = 22118.591698 eV Total energy + Delta-G solvation = -3921.528259 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.136 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -45.34636 -42.70034 -41.04739 -39.34834 -37.67943 -37.29241 -35.22909 -33.94733 -33.53588 -31.60758 -29.67982 -27.62863 -27.42958 -26.94862 -26.21816 -23.98633 -23.57406 -22.91497 -21.54447 -21.13722 -20.23620 -18.81340 -18.59417 -18.52619 -18.30693 -17.52004 -17.03770 -16.81069 -16.47675 -16.00849 -15.83068 -15.53906 -15.28354 -14.91413 -14.82398 -14.50780 -14.27235 -13.91353 -13.76979 -13.67829 -13.63536 -13.61473 -13.47552 -13.35263 -13.11285 -13.00377 -12.78004 -12.72362 -12.40290 -11.97161 -11.96299 -11.91217 -11.21393 -10.59708 -10.51792 -10.25488 -9.91748 -9.20932 -4.94200 0.03193 0.24547 1.11110 1.16277 1.22250 1.46653 1.66517 1.72805 2.08589 2.17370 2.27452 2.74820 3.15573 3.19045 3.31481 3.44230 3.59499 3.62779 3.69312 3.70921 3.87188 3.98589 4.21096 4.28124 4.30077 4.37663 4.40391 4.45298 4.45854 4.51168 4.58495 4.61645 4.67018 4.68880 4.77457 4.83239 4.83976 4.94529 4.99863 5.04877 5.37039 5.58521 5.83959 6.01276 6.35546 6.82564 7.00142 7.17924 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.168 3.832 3 N -0.332 5.332 4 N -0.313 5.313 5 C 0.176 3.824 6 C -0.017 4.017 7 H 0.152 0.848 8 C -0.118 4.118 9 C 0.131 3.869 10 H 0.123 0.877 11 N -0.696 5.696 12 C 0.593 3.407 13 O -0.577 6.577 14 C -0.082 4.082 15 C -0.127 4.127 16 C -0.234 4.234 17 C 0.050 3.950 18 C -0.063 4.063 19 O -0.566 6.566 20 Si 0.819 3.181 21 N -0.400 5.400 22 C 0.080 3.920 23 C -0.133 4.133 24 O -0.231 6.231 25 H 0.118 0.882 26 H 0.114 0.886 27 H 0.116 0.884 28 H 0.096 0.904 29 H 0.109 0.891 30 H 0.415 0.585 31 H 0.172 0.828 32 H 0.154 0.846 33 H 0.104 0.896 34 H 0.410 0.590 35 H -0.310 1.310 36 H -0.282 1.282 37 H 0.070 0.930 38 H 0.082 0.918 39 H 0.110 0.890 40 H 0.090 0.910 41 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.184 -0.326 -0.259 1.255 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.043 4.043 3 N -0.178 5.178 4 N -0.158 5.158 5 C -0.036 4.036 6 C -0.037 4.037 7 H 0.170 0.830 8 C -0.157 4.157 9 C 0.026 3.974 10 H 0.141 0.859 11 N -0.346 5.346 12 C 0.382 3.618 13 O -0.459 6.459 14 C -0.195 4.195 15 C -0.154 4.154 16 C -0.258 4.258 17 C -0.069 4.069 18 C -0.172 4.172 19 O -0.376 6.376 20 Si 0.723 3.277 21 N -0.072 5.072 22 C -0.060 4.060 23 C -0.172 4.172 24 O -0.111 6.111 25 H 0.136 0.864 26 H 0.132 0.868 27 H 0.134 0.866 28 H 0.114 0.886 29 H 0.127 0.873 30 H 0.253 0.747 31 H 0.189 0.811 32 H 0.171 0.829 33 H 0.121 0.879 34 H 0.263 0.737 35 H -0.239 1.239 36 H -0.208 1.208 37 H 0.088 0.912 38 H 0.100 0.900 39 H 0.128 0.872 40 H 0.108 0.892 41 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 1.057 0.086 -0.469 1.159 hybrid contribution -1.107 -0.948 0.104 1.462 sum -0.051 -0.862 -0.364 0.937 Atomic orbital electron populations 1.20707 0.76900 1.07244 1.06910 1.28997 0.99370 0.78840 0.97076 1.74371 0.96509 1.27080 1.19858 1.74237 1.12727 1.10277 1.18541 1.28209 0.85415 0.91373 0.98581 1.21236 0.82634 0.99204 1.00625 0.83017 1.23430 0.91280 1.05018 0.95924 1.22420 0.84841 0.94390 0.95746 0.85918 1.45487 1.06446 1.24325 1.58366 1.17064 0.82446 0.84934 0.77374 1.90773 1.82183 1.26592 1.46347 1.20268 0.84990 0.97687 1.16564 1.21621 0.99435 0.91874 1.02424 1.20808 0.93108 1.01000 1.10864 1.20797 0.94678 0.86762 1.04706 1.24772 0.86007 0.95734 1.10637 1.86409 1.25497 1.30503 1.95231 0.94409 0.87219 0.72994 0.73078 1.43976 1.05699 1.11842 1.45723 1.22250 0.99314 0.84310 1.00163 1.23607 0.92138 1.02665 0.98814 1.84812 1.17708 1.38653 1.69891 0.86392 0.86791 0.86572 0.88601 0.87253 0.74706 0.81079 0.82876 0.87857 0.73746 1.23854 1.20843 0.91176 0.89979 0.87168 0.89160 0.89063 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.40 10.51 71.24 0.75 1.15 16 2 C 0.17 0.66 8.48 88.34 0.75 1.41 16 3 N -0.33 -3.48 12.22 -165.50 -2.02 -5.50 16 4 N -0.31 -3.11 11.85 -165.50 -1.96 -5.08 16 5 C 0.18 0.80 7.54 88.34 0.67 1.47 16 6 C -0.02 0.04 4.29 -10.95 -0.05 0.00 16 7 H 0.15 -1.11 8.14 -2.39 -0.02 -1.13 16 8 C -0.12 0.49 7.38 31.12 0.23 0.72 16 9 C 0.13 -0.15 4.25 45.51 0.19 0.04 16 10 H 0.12 0.01 7.45 -2.38 -0.02 -0.01 16 11 N -0.70 -1.03 5.34 -444.00 -2.37 -3.40 16 12 C 0.59 4.99 7.77 86.45 0.67 5.66 16 13 O -0.58 -8.06 14.35 -4.32 -0.06 -8.12 16 14 C -0.08 -0.72 6.89 40.35 0.28 -0.44 16 15 C -0.13 -0.68 10.35 22.57 0.23 -0.45 16 16 C -0.23 -1.45 9.37 22.01 0.21 -1.24 16 17 C 0.05 0.32 6.18 41.35 0.26 0.57 16 18 C -0.06 0.10 2.87 71.24 0.20 0.30 16 19 O -0.57 1.58 10.22 -148.98 -1.52 0.06 16 20 Si 0.82 -2.81 31.22 68.60 2.14 -0.67 16 21 N -0.40 -3.59 3.16 -519.70 -1.64 -5.24 16 22 C 0.08 0.52 9.47 127.77 1.21 1.73 16 23 C -0.13 0.11 7.44 31.18 0.23 0.34 16 24 O -0.23 -1.04 10.87 -3.70 -0.04 -1.08 16 25 H 0.12 -1.14 8.14 -2.39 -0.02 -1.16 16 26 H 0.11 -1.17 8.14 -2.39 -0.02 -1.19 16 27 H 0.12 -0.92 8.14 -2.39 -0.02 -0.94 16 28 H 0.10 -0.26 8.06 -2.39 -0.02 -0.28 16 29 H 0.11 -0.79 8.14 -2.39 -0.02 -0.80 16 30 H 0.42 -1.00 7.66 -92.71 -0.71 -1.71 16 31 H 0.17 -0.16 7.49 -2.92 -0.02 -0.19 16 32 H 0.15 0.53 6.69 -2.91 -0.02 0.51 16 33 H 0.10 -0.60 7.96 -2.39 -0.02 -0.62 16 34 H 0.41 -5.64 8.74 -74.06 -0.65 -6.28 16 35 H -0.31 -1.92 7.11 99.48 0.71 -1.21 16 36 H -0.28 -0.31 6.87 99.48 0.68 0.37 16 37 H 0.07 0.50 8.14 -2.39 -0.02 0.48 16 38 H 0.08 0.72 6.49 -2.39 -0.02 0.71 16 39 H 0.11 0.28 6.46 -2.39 -0.02 0.27 16 40 H 0.09 -0.12 8.14 -2.39 -0.02 -0.14 16 41 H 0.09 0.21 7.80 -2.39 -0.02 0.19 16 Total: 0.00 -28.98 347.76 -1.90 -30.88 By element: Atomic # 1 Polarization: -12.87 SS G_CDS: -0.25 Total: -13.12 kcal Atomic # 6 Polarization: 5.43 SS G_CDS: 5.83 Total: 11.26 kcal Atomic # 7 Polarization: -11.21 SS G_CDS: -8.00 Total: -19.21 kcal Atomic # 8 Polarization: -7.51 SS G_CDS: -1.63 Total: -9.14 kcal Atomic # 14 Polarization: -2.81 SS G_CDS: 2.14 Total: -0.67 kcal Total: -28.98 -1.90 -30.88 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_10803936.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.761 kcal (2) G-P(sol) polarization free energy of solvation -28.979 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.782 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.899 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.877 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.883 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds