Wall clock time and date at job start Tue Mar 9 2021 13:07:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 N 1.30275 * 126.28093 * 2 1 4 4 N 1.28665 * 109.37820 * 179.73448 * 3 2 1 5 5 C 1.30277 * 109.38189 * 0.43777 * 4 3 2 6 6 C 1.50701 * 126.28312 * 179.82623 * 5 4 3 7 7 H 1.09004 * 112.84862 * 168.49531 * 6 5 4 8 8 C 1.53780 * 113.61578 * 299.69368 * 6 5 4 9 9 C 1.53783 * 87.07925 * 140.06527 * 8 6 5 10 10 H 1.09003 * 113.61232 * 89.20047 * 9 8 6 11 11 N 1.46496 * 113.61323 * 220.01651 * 9 8 6 12 12 C 1.34777 * 120.00271 * 204.99760 * 11 9 8 13 13 O 1.21278 * 119.99854 * 0.02562 * 12 11 9 14 14 C 1.50703 * 120.00161 * 180.02562 * 12 11 9 15 15 C 1.50701 * 109.47064 * 180.02562 * 14 12 11 16 16 C 1.38233 * 120.00099 * 269.72899 * 15 14 12 17 17 C 1.38234 * 119.99645 * 179.78840 * 16 15 14 18 18 C 1.38232 * 120.00446 * 0.46326 * 17 16 15 19 19 C 1.50693 * 120.00107 * 179.79093 * 18 17 16 20 20 O 1.42905 * 109.47136 * 244.97697 * 19 18 17 21 21 Si 1.86293 * 109.47320 * 4.97611 * 19 18 17 22 22 C 1.38240 * 119.99683 * 359.76905 * 18 17 16 23 23 C 1.38234 * 120.00218 * 0.02562 * 22 18 17 24 24 C 1.53781 * 87.08297 * 334.56771 * 9 8 6 25 25 O 1.34359 * 126.28180 * 179.97438 * 2 1 3 26 26 H 1.09003 * 109.46668 * 270.00677 * 1 2 3 27 27 H 1.08996 * 109.46741 * 30.00047 * 1 2 3 28 28 H 1.09001 * 109.47294 * 150.00021 * 1 2 3 29 29 H 1.09002 * 113.61383 * 25.51634 * 8 6 5 30 30 H 1.09002 * 113.68732 * 254.62103 * 8 6 5 31 31 H 0.97005 * 120.00266 * 25.00343 * 11 9 8 32 32 H 1.09002 * 109.47152 * 60.00245 * 14 12 11 33 33 H 1.09001 * 109.46980 * 300.00345 * 14 12 11 34 34 H 1.08003 * 119.99927 * 359.97438 * 16 15 14 35 35 H 1.08005 * 119.99562 * 180.24672 * 17 16 15 36 36 H 1.09004 * 109.47341 * 124.97922 * 19 18 17 37 37 H 0.96700 * 113.99912 * 180.02562 * 20 19 18 38 38 H 1.48508 * 110.00154 * 178.68166 * 21 19 18 39 39 H 1.48499 * 109.99993 * 299.99782 * 21 19 18 40 40 H 1.08000 * 119.99654 * 180.02562 * 22 18 17 41 41 H 1.07995 * 119.99943 * 179.97438 * 23 22 18 42 42 H 1.09000 * 113.61499 * 139.97811 * 24 9 8 43 43 H 1.09000 * 113.61078 * 270.88680 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6761 0.0056 5 6 3.5654 -0.6254 0.0000 6 6 4.8176 -1.4638 0.0000 7 1 4.6212 -2.5181 0.1951 8 6 5.7214 -1.2212 -1.2203 9 6 6.9158 -1.3204 -0.2567 10 1 7.2938 -2.3352 -0.1330 11 7 7.9760 -0.3483 -0.5343 12 6 9.2430 -0.6057 -0.1535 13 8 9.5054 -1.6424 0.4186 14 6 10.3335 0.3946 -0.4385 15 6 11.6458 -0.1302 0.0846 16 6 12.0413 0.1619 1.3766 17 6 13.2430 -0.3232 1.8578 18 6 14.0536 -1.0923 1.0440 19 6 15.3657 -1.6171 1.5672 20 8 16.4412 -1.0249 0.8359 21 14 15.5313 -1.1871 3.3722 22 6 13.6603 -1.3804 -0.2495 23 6 12.4566 -0.8989 -0.7294 24 6 5.9523 -0.8797 0.8579 25 8 2.3021 -1.0831 0.0005 26 1 -0.3633 0.0001 1.0277 27 1 -0.3633 0.8900 -0.5138 28 1 -0.3634 -0.8900 -0.5138 29 1 5.5995 -0.2332 -1.6644 30 1 5.6871 -2.0237 -1.9572 31 1 7.7662 0.4808 -0.9921 32 1 10.0978 1.3389 0.0523 33 1 10.4089 0.5532 -1.5143 34 1 11.4101 0.7665 2.0109 35 1 13.5501 -0.0983 2.8685 36 1 15.3978 -2.7001 1.4473 37 1 17.3180 -1.3180 1.1194 38 1 16.8069 -1.7267 3.9080 39 1 15.4893 0.2868 3.5491 40 1 14.2934 -1.9816 -0.8852 41 1 12.1496 -1.1236 -1.7401 42 1 6.1036 -1.4073 1.7997 43 1 5.8936 0.2016 0.9820 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_12335836.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:38 Heat of formation + Delta-G solvation = 26.607640 kcal Electronic energy + Delta-G solvation = -26491.452665 eV Core-core repulsion = 22506.201593 eV Total energy + Delta-G solvation = -3985.251072 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -45.21920 -41.38267 -40.46852 -39.32573 -37.66045 -37.13725 -34.86145 -34.11182 -33.54786 -31.84433 -30.19509 -29.39186 -27.01540 -26.86166 -25.54990 -23.78426 -23.71711 -23.35524 -22.01086 -21.38331 -20.82010 -18.58835 -18.48641 -18.40540 -18.06537 -17.60916 -17.14215 -16.89973 -16.55758 -16.20084 -15.93352 -15.55596 -15.48615 -15.11114 -14.63299 -14.55647 -14.45321 -14.29283 -13.89588 -13.86864 -13.79888 -13.74567 -13.48306 -13.34693 -13.02026 -12.95474 -12.83131 -12.71469 -12.37950 -12.15428 -12.00702 -11.87152 -11.83576 -11.60523 -10.85459 -10.43766 -10.41806 -10.09896 -9.75318 -9.51641 -4.90971 0.11824 0.33553 0.57884 1.19459 1.32973 1.36915 1.62928 1.64575 1.98442 2.12641 2.73020 2.82320 3.11533 3.25275 3.41493 3.43630 3.56247 3.60647 3.64640 3.86766 3.92408 3.97019 4.00679 4.11828 4.20358 4.25272 4.27373 4.37265 4.39091 4.43636 4.48593 4.50423 4.51623 4.57285 4.61364 4.66935 4.77735 4.78065 4.78361 5.03003 5.09343 5.17133 5.43082 5.48512 5.65930 5.67653 6.09092 6.44993 6.47729 7.22569 7.31941 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.163 3.837 3 N -0.288 5.288 4 N -0.282 5.282 5 C 0.174 3.826 6 C -0.022 4.022 7 H 0.127 0.873 8 C -0.131 4.131 9 C 0.130 3.870 10 H 0.124 0.876 11 N -0.722 5.722 12 C 0.517 3.483 13 O -0.525 6.525 14 C -0.104 4.104 15 C -0.064 4.064 16 C -0.099 4.099 17 C -0.113 4.113 18 C -0.072 4.072 19 C -0.077 4.077 20 O -0.536 6.536 21 Si 0.683 3.317 22 C -0.090 4.090 23 C -0.104 4.104 24 C -0.135 4.135 25 O -0.225 6.225 26 H 0.101 0.899 27 H 0.108 0.892 28 H 0.094 0.906 29 H 0.099 0.901 30 H 0.090 0.910 31 H 0.404 0.596 32 H 0.106 0.894 33 H 0.105 0.895 34 H 0.125 0.875 35 H 0.126 0.874 36 H 0.076 0.924 37 H 0.379 0.621 38 H -0.262 1.262 39 H -0.255 1.255 40 H 0.124 0.876 41 H 0.122 0.878 42 H 0.086 0.914 43 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.841 -1.945 -0.897 4.398 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.048 4.048 3 N -0.136 5.136 4 N -0.128 5.128 5 C -0.037 4.037 6 C -0.042 4.042 7 H 0.145 0.855 8 C -0.170 4.170 9 C 0.024 3.976 10 H 0.142 0.858 11 N -0.374 5.374 12 C 0.304 3.696 13 O -0.400 6.400 14 C -0.144 4.144 15 C -0.064 4.064 16 C -0.117 4.117 17 C -0.131 4.131 18 C -0.072 4.072 19 C -0.186 4.186 20 O -0.343 6.343 21 Si 0.585 3.415 22 C -0.108 4.108 23 C -0.122 4.122 24 C -0.174 4.174 25 O -0.104 6.104 26 H 0.119 0.881 27 H 0.127 0.873 28 H 0.113 0.887 29 H 0.117 0.883 30 H 0.108 0.892 31 H 0.239 0.761 32 H 0.124 0.876 33 H 0.124 0.876 34 H 0.143 0.857 35 H 0.144 0.856 36 H 0.094 0.906 37 H 0.227 0.773 38 H -0.187 1.187 39 H -0.180 1.180 40 H 0.142 0.858 41 H 0.140 0.860 42 H 0.105 0.895 43 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -3.297 -0.748 -0.168 3.385 hybrid contribution 0.378 -0.833 -0.863 1.258 sum -2.919 -1.581 -1.031 3.476 Atomic orbital electron populations 1.20406 0.79985 1.05933 1.05488 1.28104 0.97959 0.79517 0.99214 1.74442 0.95959 1.25521 1.17653 1.74311 1.12381 1.08993 1.17160 1.27707 0.84686 0.91619 0.99689 1.21011 0.84079 0.98516 1.00642 0.85469 1.23500 0.92984 1.04440 0.96032 1.22322 0.85365 0.95052 0.94849 0.85792 1.45943 1.07469 1.22723 1.61242 1.20617 0.83083 0.87712 0.78218 1.90752 1.82341 1.26557 1.40363 1.20699 0.91106 0.98740 1.03855 1.19254 0.94477 0.98277 0.94413 1.20883 0.96108 0.99865 0.94870 1.20915 0.95210 0.97704 0.99250 1.19219 0.94210 0.98803 0.94985 1.24806 0.86738 0.99594 1.07484 1.86592 1.16699 1.70536 1.60514 0.94925 0.86936 0.82784 0.76857 1.20932 0.95906 0.99218 0.94768 1.20986 0.94278 0.97216 0.99709 1.23626 0.91922 1.03270 0.98616 1.84790 1.17580 1.38453 1.69621 0.88099 0.87338 0.88729 0.88254 0.89177 0.76052 0.87560 0.87649 0.85696 0.85625 0.90643 0.77345 1.18703 1.17999 0.85821 0.85966 0.89499 0.87841 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.19 10.51 36.01 0.38 0.57 16 2 C 0.16 0.25 8.48 -12.94 -0.11 0.14 16 3 N -0.29 -1.23 12.22 32.55 0.40 -0.83 16 4 N -0.28 -1.08 11.83 32.55 0.39 -0.69 16 5 C 0.17 0.27 7.54 -12.94 -0.10 0.18 16 6 C -0.02 0.04 4.29 -90.96 -0.39 -0.35 16 7 H 0.13 -0.44 8.14 -51.93 -0.42 -0.86 16 8 C -0.13 0.36 7.38 -25.92 -0.19 0.17 16 9 C 0.13 -0.25 4.24 -67.12 -0.28 -0.53 16 10 H 0.12 -0.11 7.46 -51.93 -0.39 -0.50 16 11 N -0.72 1.45 5.35 -53.02 -0.28 1.17 16 12 C 0.52 0.20 7.82 -10.98 -0.09 0.12 16 13 O -0.53 -2.39 15.63 5.56 0.09 -2.30 16 14 C -0.10 0.16 5.83 -29.03 -0.17 -0.01 16 15 C -0.06 -0.09 4.37 -104.62 -0.46 -0.54 16 16 C -0.10 -0.16 9.70 -39.58 -0.38 -0.54 16 17 C -0.11 -0.23 8.67 -39.58 -0.34 -0.57 16 18 C -0.07 -0.19 5.38 -104.63 -0.56 -0.75 16 19 C -0.08 -0.09 2.79 36.00 0.10 0.01 16 20 O -0.54 -1.12 12.81 -35.23 -0.45 -1.58 16 21 Si 0.68 0.11 29.85 -169.99 -5.07 -4.96 16 22 C -0.09 -0.23 9.69 -39.58 -0.38 -0.62 16 23 C -0.10 -0.19 9.70 -39.58 -0.38 -0.57 16 24 C -0.14 0.21 7.42 -25.92 -0.19 0.02 16 25 O -0.22 -0.42 10.87 5.40 0.06 -0.36 16 26 H 0.10 -0.44 8.14 -51.93 -0.42 -0.87 16 27 H 0.11 -0.43 8.14 -51.93 -0.42 -0.85 16 28 H 0.09 -0.44 8.14 -51.93 -0.42 -0.87 16 29 H 0.10 -0.23 8.07 -51.93 -0.42 -0.65 16 30 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 31 H 0.40 -1.71 8.73 -40.82 -0.36 -2.07 16 32 H 0.11 -0.37 8.08 -51.93 -0.42 -0.79 16 33 H 0.11 -0.37 8.08 -51.93 -0.42 -0.79 16 34 H 0.13 -0.04 8.06 -52.48 -0.42 -0.46 16 35 H 0.13 0.05 4.87 -52.48 -0.26 -0.20 16 36 H 0.08 -0.03 7.96 -51.93 -0.41 -0.44 16 37 H 0.38 -0.75 8.74 45.56 0.40 -0.35 16 38 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 39 H -0.26 -0.78 7.05 56.52 0.40 -0.38 16 40 H 0.12 0.20 8.06 -52.49 -0.42 -0.22 16 41 H 0.12 0.01 8.06 -52.49 -0.42 -0.41 16 42 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 43 H 0.10 -0.05 7.78 -51.93 -0.40 -0.45 16 LS Contribution 369.36 15.07 5.57 5.57 Total: 0.00 -11.33 369.36 -8.55 -19.88 By element: Atomic # 1 Polarization: -6.90 SS G_CDS: -5.68 Total: -12.59 kcal Atomic # 6 Polarization: 0.26 SS G_CDS: -3.56 Total: -3.29 kcal Atomic # 7 Polarization: -0.86 SS G_CDS: 0.50 Total: -0.36 kcal Atomic # 8 Polarization: -3.94 SS G_CDS: -0.31 Total: -4.24 kcal Atomic # 14 Polarization: 0.11 SS G_CDS: -5.07 Total: -4.96 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -11.33 -8.55 -19.88 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_12335836.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.487 kcal (2) G-P(sol) polarization free energy of solvation -11.325 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.162 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.554 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.880 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.608 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds