Wall clock time and date at job start Tue Mar 9 2021 13:08:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.30281 * 126.28117 * 2 1 4 4 N 1.28665 * 109.38207 * 180.02562 * 3 2 1 5 5 C 1.30276 * 109.37819 * 0.02562 * 4 3 2 6 6 C 1.50703 * 126.28226 * 179.97438 * 5 4 3 7 7 H 1.08996 * 112.91179 * 191.27910 * 6 5 4 8 8 C 1.53781 * 113.61490 * 322.53308 * 6 5 4 9 9 C 1.53776 * 87.08459 * 139.98029 * 8 6 5 10 10 H 1.08995 * 113.69589 * 89.12413 * 9 8 6 11 11 N 1.46504 * 113.61488 * 220.02116 * 9 8 6 12 12 C 1.34770 * 119.99716 * 252.49268 * 11 9 8 13 13 O 1.21568 * 120.00084 * 0.02562 * 12 11 9 14 14 C 1.47732 * 119.99950 * 179.97438 * 12 11 9 15 15 C 1.39629 * 120.11478 * 179.97438 * 14 12 11 16 16 C 1.37863 * 119.87710 * 179.72806 * 15 14 12 17 17 C 1.50693 * 119.94273 * 180.23480 * 16 15 14 18 18 O 1.42896 * 109.47013 * 14.99945 * 17 16 15 19 19 Si 1.86305 * 109.47059 * 134.99981 * 17 16 15 20 20 C 1.38633 * 120.11638 * 0.25427 * 16 15 14 21 21 F 1.35101 * 119.88232 * 180.02562 * 20 16 15 22 22 C 1.38681 * 120.24137 * 0.02562 * 20 16 15 23 23 C 1.37814 * 120.11770 * 359.97438 * 22 20 16 24 24 C 1.53778 * 113.61209 * 60.02725 * 6 5 4 25 25 O 1.34355 * 126.28544 * 180.28959 * 2 1 3 26 26 H 1.09009 * 109.47094 * 89.97219 * 1 2 3 27 27 H 1.09000 * 109.47070 * 209.97349 * 1 2 3 28 28 H 1.09007 * 109.47360 * 329.97601 * 1 2 3 29 29 H 1.08999 * 113.61667 * 25.42654 * 8 6 5 30 30 H 1.09003 * 113.61252 * 254.52985 * 8 6 5 31 31 H 0.96997 * 119.99805 * 72.49325 * 11 9 8 32 32 H 1.08002 * 120.06687 * 0.02562 * 15 14 12 33 33 H 1.08994 * 109.47191 * 254.99904 * 17 16 15 34 34 H 0.96703 * 114.00490 * 60.00274 * 18 17 16 35 35 H 1.48498 * 109.99854 * 58.68082 * 19 17 16 36 36 H 1.48506 * 109.99997 * 180.02562 * 19 17 16 37 37 H 1.07994 * 119.94666 * 179.97438 * 22 20 16 38 38 H 1.08005 * 120.06616 * 180.02562 * 23 22 20 39 39 H 1.09004 * 113.61424 * 105.47248 * 24 6 5 40 40 H 1.09005 * 113.61820 * 334.56785 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6762 -0.0005 5 6 3.5654 -0.6253 -0.0015 6 6 4.8176 -1.4638 -0.0029 7 1 4.6223 -2.5178 -0.1998 8 6 5.9511 -0.8766 -0.8604 9 6 6.9158 -1.3183 0.2527 10 1 7.2950 -2.3323 0.1269 11 7 7.9751 -0.3453 0.5315 12 6 9.2421 -0.6006 0.1495 13 8 9.5058 -1.6380 -0.4269 14 6 10.3101 0.3807 0.4300 15 6 11.6237 0.1184 0.0358 16 6 12.6156 1.0401 0.2951 17 6 14.0327 0.7609 -0.1344 18 8 14.0424 -0.3166 -1.0730 19 14 14.7520 2.2841 -0.9302 20 6 12.3116 2.2231 0.9507 21 9 13.2873 3.1233 1.2020 22 6 11.0097 2.4861 1.3496 23 6 10.0105 1.5716 1.0954 24 6 5.7219 -1.2223 1.2173 25 8 2.3021 -1.0830 -0.0055 26 1 -0.3634 0.0005 -1.0277 27 1 -0.3633 -0.8902 0.5134 28 1 -0.3634 0.8898 0.5142 29 1 5.8910 0.2049 -0.9824 30 1 6.1024 -1.4022 -1.8033 31 1 7.7645 0.4825 0.9910 32 1 11.8614 -0.8027 -0.4757 33 1 14.6296 0.4896 0.7363 34 1 13.5300 -0.1445 -1.8748 35 1 14.7183 3.4203 0.0254 36 1 16.1494 2.0216 -1.3589 37 1 10.7784 3.4090 1.8604 38 1 8.9968 1.7774 1.4061 39 1 5.6882 -2.0270 1.9518 40 1 5.5992 -0.2353 1.6633 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_12496548.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:16 Heat of formation + Delta-G solvation = -3.126792 kcal Electronic energy + Delta-G solvation = -27416.245291 eV Core-core repulsion = 23115.788480 eV Total energy + Delta-G solvation = -4300.456811 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.116 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -50.38724 -45.24204 -41.63247 -40.44973 -39.17710 -37.70091 -37.15960 -35.07940 -33.73533 -32.70438 -31.96805 -29.72943 -27.36526 -27.05846 -26.80450 -25.08375 -23.70111 -23.32597 -23.18837 -21.57854 -21.02000 -19.30720 -18.87015 -18.58255 -18.41708 -17.91751 -17.73312 -17.25475 -17.10670 -16.60818 -16.17719 -16.00772 -15.78583 -15.65474 -15.55102 -15.19609 -14.82496 -14.66173 -14.49690 -14.07110 -13.92300 -13.86789 -13.78692 -13.64221 -13.41242 -13.31059 -12.87775 -12.81176 -12.78721 -12.43404 -12.35833 -12.05866 -11.86580 -11.34621 -11.06960 -10.91112 -10.44566 -10.25154 -10.09633 -9.74022 -5.02458 -0.54003 -0.04627 0.09560 1.16537 1.21611 1.34625 1.60208 1.66048 1.95466 2.02249 2.54634 2.70910 2.94782 3.06292 3.18416 3.21491 3.30156 3.39116 3.52194 3.52457 3.57267 3.62007 3.84886 3.94479 4.04851 4.18809 4.24796 4.29192 4.33954 4.34974 4.46583 4.49016 4.50658 4.58304 4.62333 4.71743 4.74075 4.76250 4.80416 4.94036 4.99511 5.03563 5.32923 5.54396 6.32055 6.43193 7.06254 7.29605 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.163 3.837 3 N -0.288 5.288 4 N -0.282 5.282 5 C 0.173 3.827 6 C -0.022 4.022 7 H 0.129 0.871 8 C -0.135 4.135 9 C 0.129 3.871 10 H 0.127 0.873 11 N -0.715 5.715 12 C 0.565 3.435 13 O -0.528 6.528 14 C -0.143 4.143 15 C -0.019 4.019 16 C -0.155 4.155 17 C -0.065 4.065 18 O -0.535 6.535 19 Si 0.682 3.318 20 C 0.119 3.881 21 F -0.121 7.121 22 C -0.151 4.151 23 C -0.058 4.058 24 C -0.131 4.131 25 O -0.225 6.225 26 H 0.101 0.899 27 H 0.094 0.906 28 H 0.108 0.892 29 H 0.104 0.896 30 H 0.088 0.912 31 H 0.403 0.597 32 H 0.156 0.844 33 H 0.123 0.877 34 H 0.382 0.618 35 H -0.228 1.228 36 H -0.258 1.258 37 H 0.147 0.853 38 H 0.138 0.862 39 H 0.091 0.909 40 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.364 0.134 0.228 5.371 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.047 4.047 3 N -0.136 5.136 4 N -0.128 5.128 5 C -0.037 4.037 6 C -0.042 4.042 7 H 0.146 0.854 8 C -0.174 4.174 9 C 0.024 3.976 10 H 0.145 0.855 11 N -0.366 5.366 12 C 0.352 3.648 13 O -0.405 6.405 14 C -0.147 4.147 15 C -0.038 4.038 16 C -0.157 4.157 17 C -0.175 4.175 18 O -0.341 6.341 19 Si 0.581 3.419 20 C 0.099 3.901 21 F -0.099 7.099 22 C -0.170 4.170 23 C -0.077 4.077 24 C -0.170 4.170 25 O -0.104 6.104 26 H 0.119 0.881 27 H 0.113 0.887 28 H 0.127 0.873 29 H 0.122 0.878 30 H 0.107 0.893 31 H 0.240 0.760 32 H 0.174 0.826 33 H 0.140 0.860 34 H 0.229 0.771 35 H -0.152 1.152 36 H -0.183 1.183 37 H 0.164 0.836 38 H 0.156 0.844 39 H 0.110 0.890 40 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -3.771 0.999 0.315 3.914 hybrid contribution -0.658 -0.957 0.893 1.465 sum -4.429 0.042 1.207 4.591 Atomic orbital electron populations 1.20410 0.79981 1.05944 1.05502 1.28105 0.97958 0.79502 0.99156 1.74444 0.95942 1.25509 1.17670 1.74307 1.12409 1.08980 1.17147 1.27686 0.84688 0.91613 0.99756 1.20999 0.84081 0.98595 1.00526 0.85352 1.23634 0.91813 1.03352 0.98632 1.22388 0.85187 0.94921 0.95093 0.85503 1.45812 1.07325 1.22841 1.60632 1.18148 0.82262 0.86018 0.78357 1.90821 1.82432 1.26235 1.40974 1.19954 0.94424 0.96003 1.04293 1.20972 0.89624 0.98400 0.94758 1.20369 0.98309 0.94185 1.02816 1.25001 0.94898 1.01196 0.96425 1.86518 1.75296 1.40397 1.31870 0.95239 0.83067 0.77310 0.86270 1.17784 0.86046 0.87338 0.98900 1.91583 1.60482 1.66146 1.91717 1.21103 0.90925 1.01842 1.03144 1.21189 0.99439 0.91966 0.95118 1.23511 0.92833 1.04540 0.96095 1.84790 1.17568 1.38456 1.69601 0.88089 0.88716 0.87332 0.87763 0.89320 0.76023 0.82622 0.85980 0.77052 1.15217 1.18330 0.83563 0.84410 0.89008 0.88224 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.20 10.51 36.00 0.38 0.58 16 2 C 0.16 0.20 8.48 -12.94 -0.11 0.09 16 3 N -0.29 -1.13 12.22 32.55 0.40 -0.73 16 4 N -0.28 -0.96 11.83 32.55 0.39 -0.58 16 5 C 0.17 0.20 7.53 -12.94 -0.10 0.11 16 6 C -0.02 0.05 4.29 -90.96 -0.39 -0.34 16 7 H 0.13 -0.51 8.14 -51.93 -0.42 -0.93 16 8 C -0.14 0.27 7.42 -25.92 -0.19 0.08 16 9 C 0.13 -0.29 4.24 -67.12 -0.28 -0.58 16 10 H 0.13 -0.19 7.46 -51.93 -0.39 -0.58 16 11 N -0.71 1.42 5.31 -53.99 -0.29 1.13 16 12 C 0.56 0.41 7.77 -12.38 -0.10 0.31 16 13 O -0.53 -2.24 15.94 5.31 0.08 -2.16 16 14 C -0.14 0.05 5.87 -104.96 -0.62 -0.57 16 15 C -0.02 0.00 8.78 -39.20 -0.34 -0.35 16 16 C -0.16 0.00 5.13 -104.62 -0.54 -0.53 16 17 C -0.07 0.00 2.96 36.00 0.11 0.11 16 18 O -0.54 -0.11 11.64 -35.23 -0.41 -0.52 16 19 Si 0.68 -0.27 30.81 -169.99 -5.24 -5.51 16 20 C 0.12 0.01 6.67 -39.27 -0.26 -0.25 16 21 F -0.12 -0.18 12.81 2.25 0.03 -0.15 16 22 C -0.15 0.24 10.01 -39.57 -0.40 -0.15 16 23 C -0.06 0.13 9.54 -39.20 -0.37 -0.24 16 24 C -0.13 0.42 7.38 -25.92 -0.19 0.23 16 25 O -0.22 -0.35 10.87 5.41 0.06 -0.29 16 26 H 0.10 -0.46 8.14 -51.92 -0.42 -0.89 16 27 H 0.09 -0.46 8.14 -51.93 -0.42 -0.89 16 28 H 0.11 -0.45 8.14 -51.93 -0.42 -0.88 16 29 H 0.10 -0.10 7.78 -51.93 -0.40 -0.51 16 30 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 31 H 0.40 -1.69 6.76 -40.82 -0.28 -1.96 16 32 H 0.16 0.11 6.66 -52.49 -0.35 -0.24 16 33 H 0.12 0.05 7.96 -51.93 -0.41 -0.36 16 34 H 0.38 -1.39 8.43 45.56 0.38 -1.01 16 35 H -0.23 -0.42 5.27 56.52 0.30 -0.12 16 36 H -0.26 -0.73 7.11 56.52 0.40 -0.33 16 37 H 0.15 -0.49 8.06 -52.49 -0.42 -0.91 16 38 H 0.14 -0.71 6.40 -52.48 -0.34 -1.05 16 39 H 0.09 -0.38 8.14 -51.93 -0.42 -0.80 16 40 H 0.10 -0.28 8.07 -51.93 -0.42 -0.70 16 LS Contribution 346.83 15.07 5.23 5.23 Total: 0.00 -10.21 346.83 -7.62 -17.83 By element: Atomic # 1 Polarization: -8.28 SS G_CDS: -4.46 Total: -12.75 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: -3.41 Total: -1.51 kcal Atomic # 7 Polarization: -0.67 SS G_CDS: 0.50 Total: -0.17 kcal Atomic # 8 Polarization: -2.70 SS G_CDS: -0.27 Total: -2.96 kcal Atomic # 9 Polarization: -0.18 SS G_CDS: 0.03 Total: -0.15 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: -5.24 Total: -5.51 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -10.21 -7.62 -17.83 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_12496548.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.706 kcal (2) G-P(sol) polarization free energy of solvation -10.213 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.493 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.620 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.832 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.127 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds