Wall clock time and date at job start Tue Mar 9 2021 13:08:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.30273 * 126.28707 * 2 1 4 4 N 1.28667 * 109.38092 * 180.02562 * 3 2 1 5 5 C 1.30273 * 109.38107 * 359.97438 * 4 3 2 6 6 C 1.50701 * 126.28079 * 179.97438 * 5 4 3 7 7 H 1.09000 * 112.85150 * 168.82644 * 6 5 4 8 8 C 1.53789 * 113.61057 * 300.02160 * 6 5 4 9 9 C 1.53784 * 87.08021 * 139.98321 * 8 6 5 10 10 H 1.08998 * 113.61699 * 89.11698 * 9 8 6 11 11 N 1.46497 * 113.61208 * 219.93038 * 9 8 6 12 12 C 1.34776 * 119.99997 * 204.99547 * 11 9 8 13 13 O 1.21279 * 119.99890 * 0.02562 * 12 11 9 14 14 C 1.50704 * 119.99729 * 180.02562 * 12 11 9 15 15 N 1.46501 * 109.46803 * 180.02562 * 14 12 11 16 16 C 1.35041 * 125.92645 * 124.71735 * 15 14 12 17 17 C 1.35091 * 107.97938 * 179.89464 * 16 15 14 18 18 C 1.50694 * 126.07729 * 180.13859 * 17 16 15 19 19 O 1.42894 * 109.47098 * 105.23230 * 18 17 16 20 20 Si 1.86307 * 109.47237 * 345.23533 * 18 17 16 21 21 C 1.40849 * 107.84468 * 0.37130 * 17 16 15 22 22 C 1.48420 * 126.03478 * 179.75237 * 21 17 16 23 23 C 1.39323 * 120.11646 * 316.94190 * 22 21 17 24 24 C 1.38025 * 119.87294 * 179.74237 * 23 22 21 25 25 C 1.38312 * 120.12257 * 0.53547 * 24 23 22 26 26 C 1.38321 * 120.24093 * 359.72019 * 25 24 23 27 27 C 1.38019 * 120.11992 * 0.02562 * 26 25 24 28 28 N 1.31615 * 107.92767 * 359.76932 * 21 17 16 29 29 C 1.53784 * 87.08097 * 334.56430 * 9 8 6 30 30 O 1.34353 * 107.43700 * 0.02562 * 5 4 3 31 31 H 1.08997 * 109.46834 * 90.02300 * 1 2 3 32 32 H 1.08997 * 109.47024 * 210.02592 * 1 2 3 33 33 H 1.08999 * 109.46667 * 330.03051 * 1 2 3 34 34 H 1.09004 * 113.61041 * 254.53018 * 8 6 5 35 35 H 1.08994 * 113.61575 * 25.35052 * 8 6 5 36 36 H 0.96999 * 120.00103 * 25.00745 * 11 9 8 37 37 H 1.08993 * 109.47474 * 300.00397 * 14 12 11 38 38 H 1.09007 * 109.46891 * 60.00902 * 14 12 11 39 39 H 1.08004 * 126.01138 * 0.02562 * 16 15 14 40 40 H 1.08999 * 109.47320 * 225.23645 * 18 17 16 41 41 H 0.96706 * 114.00407 * 299.99829 * 19 18 17 42 42 H 1.48499 * 110.00119 * 179.97438 * 20 18 17 43 43 H 1.48504 * 109.99528 * 301.31680 * 20 18 17 44 44 H 1.08001 * 120.06245 * 359.97438 * 23 22 21 45 45 H 1.08004 * 119.93420 * 180.25503 * 24 23 22 46 46 H 1.08002 * 119.88296 * 179.74100 * 25 24 23 47 47 H 1.08003 * 119.93871 * 179.97438 * 26 25 24 48 48 H 1.07997 * 120.06324 * 179.97438 * 27 26 25 49 49 H 1.08995 * 113.61614 * 270.88825 * 29 9 8 50 50 H 1.09005 * 113.60961 * 139.98144 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2780 1.0501 0.0000 4 7 3.5091 0.6759 -0.0005 5 6 3.5653 -0.6256 -0.0004 6 6 4.8176 -1.4641 -0.0014 7 1 4.6212 -2.5184 0.1936 8 6 5.7205 -1.2212 -1.2224 9 6 6.9155 -1.3184 -0.2593 10 1 7.2939 -2.3329 -0.1339 11 7 7.9754 -0.3466 -0.5393 12 6 9.2426 -0.6031 -0.1588 13 8 9.5055 -1.6387 0.4150 14 6 10.3327 0.3969 -0.4464 15 7 11.6088 -0.1121 0.0623 16 6 12.7415 -0.2705 -0.6557 17 6 13.6932 -0.7593 0.1692 18 6 15.1147 -1.0848 -0.2104 19 8 15.9880 -0.0786 0.3062 20 14 15.2640 -1.1432 -2.0665 21 6 13.1190 -0.9156 1.4458 22 6 13.8074 -1.4306 2.6557 23 6 14.6446 -2.5405 2.5644 24 6 15.2864 -3.0120 3.6917 25 6 15.0910 -2.3916 4.9123 26 6 14.2567 -1.2926 5.0096 27 6 13.6140 -0.8096 3.8877 28 7 11.8642 -0.5246 1.3763 29 6 5.9521 -0.8780 0.8555 30 8 2.3021 -1.0832 -0.0002 31 1 -0.3633 -0.0004 -1.0276 32 1 -0.3633 -0.8897 0.5142 33 1 -0.3632 0.8903 0.5134 34 1 5.6859 -2.0250 -1.9578 35 1 5.5962 -0.2342 -1.6679 36 1 7.7651 0.4816 -0.9985 37 1 10.4075 0.5536 -1.5225 38 1 10.0971 1.3420 0.0429 39 1 12.8655 -0.0440 -1.7044 40 1 15.3895 -2.0535 0.2069 41 1 15.8013 0.8112 -0.0232 42 1 16.6616 -1.4628 -2.4538 43 1 14.3374 -2.1639 -2.6186 44 1 14.7940 -3.0287 1.6127 45 1 15.9389 -3.8698 3.6213 46 1 15.5919 -2.7664 5.7927 47 1 14.1073 -0.8122 5.9653 48 1 12.9625 0.0483 3.9648 49 1 5.8921 0.2033 0.9789 50 1 6.1045 -1.4048 1.7976 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_12622748.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:19 Heat of formation + Delta-G solvation = 119.769547 kcal Electronic energy + Delta-G solvation = -35373.026970 eV Core-core repulsion = 30565.210220 eV Total energy + Delta-G solvation = -4807.816750 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.163 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -45.25687 -42.43680 -41.28344 -39.77901 -39.42095 -37.60536 -37.17392 -35.04783 -34.70675 -33.66076 -32.23275 -31.81994 -31.29389 -29.88183 -28.74738 -27.08414 -26.80085 -25.89833 -24.31437 -23.69548 -23.34721 -23.19803 -21.88060 -21.52011 -21.14773 -20.74954 -18.82212 -18.50606 -18.47993 -18.36911 -17.57962 -17.46454 -17.04306 -16.80059 -16.40822 -16.18316 -16.15427 -15.64097 -15.56003 -15.47601 -15.38443 -15.22016 -14.71555 -14.53390 -14.24930 -14.20949 -14.15504 -13.92692 -13.88616 -13.85891 -13.81195 -13.55104 -13.37604 -13.24993 -12.89673 -12.81645 -12.47035 -12.37999 -12.30190 -12.08523 -11.98627 -11.88280 -11.75296 -11.62354 -11.19573 -10.53533 -10.46064 -10.24914 -10.17595 -9.68406 -9.65508 -9.18041 -5.07186 0.08041 0.30097 0.66153 0.81879 1.14002 1.24628 1.32567 1.37295 1.40229 1.65265 1.85789 1.97963 2.02091 2.68998 3.02854 3.06722 3.17727 3.27581 3.38864 3.47432 3.50459 3.54724 3.60564 3.66548 3.74289 3.85316 3.92813 4.12058 4.17689 4.18583 4.23224 4.24009 4.28432 4.32550 4.34893 4.44074 4.47861 4.48514 4.54983 4.60005 4.64265 4.69200 4.72942 4.75215 4.86364 4.91026 4.93617 5.12718 5.26625 5.28416 5.42986 5.72602 5.75723 5.77918 5.84819 6.19319 6.24957 6.70140 6.75216 7.00856 7.28123 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.164 3.836 3 N -0.288 5.288 4 N -0.282 5.282 5 C 0.173 3.827 6 C -0.022 4.022 7 H 0.128 0.872 8 C -0.129 4.129 9 C 0.131 3.869 10 H 0.124 0.876 11 N -0.718 5.718 12 C 0.500 3.500 13 O -0.503 6.503 14 C 0.115 3.885 15 N -0.359 5.359 16 C 0.064 3.936 17 C -0.251 4.251 18 C -0.028 4.028 19 O -0.538 6.538 20 Si 0.680 3.320 21 C 0.131 3.869 22 C -0.006 4.006 23 C -0.094 4.094 24 C -0.119 4.119 25 C -0.113 4.113 26 C -0.120 4.120 27 C -0.091 4.091 28 N -0.247 5.247 29 C -0.135 4.135 30 O -0.225 6.225 31 H 0.101 0.899 32 H 0.094 0.906 33 H 0.108 0.892 34 H 0.090 0.910 35 H 0.100 0.900 36 H 0.405 0.595 37 H 0.130 0.870 38 H 0.120 0.880 39 H 0.181 0.819 40 H 0.112 0.888 41 H 0.375 0.625 42 H -0.253 1.253 43 H -0.256 1.256 44 H 0.121 0.879 45 H 0.125 0.875 46 H 0.123 0.877 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.104 0.896 50 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.972 2.129 -5.051 6.769 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.047 4.047 3 N -0.136 5.136 4 N -0.128 5.128 5 C -0.038 4.038 6 C -0.042 4.042 7 H 0.146 0.854 8 C -0.168 4.168 9 C 0.026 3.974 10 H 0.142 0.858 11 N -0.371 5.371 12 C 0.284 3.716 13 O -0.375 6.375 14 C -0.010 4.010 15 N -0.140 5.140 16 C -0.081 4.081 17 C -0.262 4.262 18 C -0.140 4.140 19 O -0.342 6.342 20 Si 0.581 3.419 21 C -0.035 4.035 22 C -0.008 4.008 23 C -0.113 4.113 24 C -0.137 4.137 25 C -0.131 4.131 26 C -0.138 4.138 27 C -0.110 4.110 28 N -0.067 5.067 29 C -0.174 4.174 30 O -0.104 6.104 31 H 0.119 0.881 32 H 0.113 0.887 33 H 0.127 0.873 34 H 0.109 0.891 35 H 0.119 0.881 36 H 0.241 0.759 37 H 0.148 0.852 38 H 0.138 0.862 39 H 0.197 0.803 40 H 0.129 0.871 41 H 0.222 0.778 42 H -0.178 1.178 43 H -0.181 1.181 44 H 0.139 0.861 45 H 0.143 0.857 46 H 0.141 0.859 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.123 0.877 50 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -4.202 1.837 -4.489 6.417 hybrid contribution -0.231 -1.168 -0.223 1.211 sum -4.433 0.669 -4.712 6.504 Atomic orbital electron populations 1.20411 0.79955 1.05983 1.05488 1.28114 0.97969 0.79486 0.99131 1.74441 0.95933 1.25505 1.17673 1.74305 1.12424 1.08957 1.17134 1.27668 0.84687 0.91614 0.99790 1.20996 0.84125 0.98570 1.00526 0.85438 1.23499 0.92789 1.04519 0.96027 1.22342 0.85138 0.94832 0.95091 0.85805 1.45812 1.07104 1.23044 1.61128 1.20603 0.83546 0.88032 0.79403 1.90840 1.81941 1.25892 1.38827 1.21528 0.80367 0.97194 1.01915 1.47854 1.08291 1.50525 1.07377 1.22218 0.86280 1.01377 0.98183 1.20459 0.98078 1.14164 0.93525 1.24396 0.85627 0.94029 1.09926 1.86527 1.55584 1.19301 1.72812 0.95394 0.81544 0.89130 0.75784 1.20595 0.90792 0.98759 0.93391 1.17690 0.97147 0.95920 0.90075 1.21075 0.96100 0.95405 0.98706 1.21061 0.99876 1.00254 0.92546 1.21245 0.98251 0.95892 0.97752 1.21101 0.97358 0.96943 0.98426 1.21164 0.98728 0.99638 0.91498 1.77812 1.14937 1.18224 0.95764 1.23625 0.91803 1.03344 0.98630 1.84792 1.17563 1.38466 1.69602 0.88085 0.88707 0.87307 0.89109 0.88130 0.75937 0.85203 0.86195 0.80258 0.87097 0.77839 1.17768 1.18077 0.86120 0.85694 0.85855 0.85704 0.85859 0.87737 0.89442 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.20 10.51 36.01 0.38 0.58 16 2 C 0.16 0.22 8.48 -12.94 -0.11 0.11 16 3 N -0.29 -1.16 12.22 32.55 0.40 -0.76 16 4 N -0.28 -1.00 11.83 32.55 0.39 -0.61 16 5 C 0.17 0.24 7.53 -12.94 -0.10 0.14 16 6 C -0.02 0.04 4.29 -90.95 -0.39 -0.35 16 7 H 0.13 -0.44 8.14 -51.93 -0.42 -0.86 16 8 C -0.13 0.42 7.38 -25.91 -0.19 0.23 16 9 C 0.13 -0.29 4.24 -67.12 -0.28 -0.57 16 10 H 0.12 -0.11 7.46 -51.93 -0.39 -0.50 16 11 N -0.72 2.06 5.36 -53.02 -0.28 1.77 16 12 C 0.50 0.00 7.86 -10.98 -0.09 -0.08 16 13 O -0.50 -2.69 15.30 5.56 0.09 -2.60 16 14 C 0.12 -0.33 6.99 -5.19 -0.04 -0.36 16 15 N -0.36 -0.46 3.40 -62.58 -0.21 -0.67 16 16 C 0.06 -0.02 9.96 -17.26 -0.17 -0.19 16 17 C -0.25 -0.48 5.35 -104.76 -0.56 -1.04 16 18 C -0.03 -0.03 2.52 36.00 0.09 0.07 16 19 O -0.54 -0.73 12.88 -35.23 -0.45 -1.19 16 20 Si 0.68 -0.71 30.74 -169.99 -5.22 -5.93 16 21 C 0.13 0.60 6.66 -82.78 -0.55 0.05 16 22 C -0.01 -0.03 5.74 -104.90 -0.60 -0.63 16 23 C -0.09 -0.35 8.88 -39.26 -0.35 -0.70 16 24 C -0.12 -0.31 10.03 -39.63 -0.40 -0.71 16 25 C -0.11 -0.26 10.04 -39.52 -0.40 -0.66 16 26 C -0.12 -0.33 10.03 -39.63 -0.40 -0.72 16 27 C -0.09 -0.37 9.78 -39.26 -0.38 -0.75 16 28 N -0.25 -1.26 11.67 33.43 0.39 -0.87 16 29 C -0.13 0.21 7.42 -25.91 -0.19 0.02 16 30 O -0.22 -0.39 10.87 5.40 0.06 -0.33 16 31 H 0.10 -0.47 8.14 -51.93 -0.42 -0.89 16 32 H 0.09 -0.45 8.14 -51.93 -0.42 -0.87 16 33 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 34 H 0.09 -0.37 8.14 -51.93 -0.42 -0.80 16 35 H 0.10 -0.31 8.07 -51.93 -0.42 -0.73 16 36 H 0.41 -2.33 8.73 -40.82 -0.36 -2.69 16 37 H 0.13 -0.93 8.07 -51.93 -0.42 -1.35 16 38 H 0.12 -0.57 8.14 -51.92 -0.42 -1.00 16 39 H 0.18 -0.85 6.40 -52.48 -0.34 -1.19 16 40 H 0.11 0.21 5.57 -51.93 -0.29 -0.08 16 41 H 0.37 -1.01 8.70 45.56 0.40 -0.61 16 42 H -0.25 -0.58 7.11 56.52 0.40 -0.17 16 43 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 44 H 0.12 0.31 6.24 -52.49 -0.33 -0.01 16 45 H 0.13 0.07 8.06 -52.48 -0.42 -0.36 16 46 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 47 H 0.12 0.08 8.06 -52.48 -0.42 -0.34 16 48 H 0.12 0.43 8.06 -52.49 -0.42 0.01 16 49 H 0.10 -0.06 7.78 -51.93 -0.40 -0.47 16 50 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 LS Contribution 428.42 15.07 6.46 6.46 Total: 0.00 -15.46 428.42 -9.52 -24.99 By element: Atomic # 1 Polarization: -8.28 SS G_CDS: -6.39 Total: -14.67 kcal Atomic # 6 Polarization: -0.85 SS G_CDS: -4.73 Total: -5.58 kcal Atomic # 7 Polarization: -1.82 SS G_CDS: 0.68 Total: -1.14 kcal Atomic # 8 Polarization: -3.81 SS G_CDS: -0.31 Total: -4.12 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: -5.22 Total: -5.93 kcal Total LS contribution 6.46 Total: 6.46 kcal Total: -15.46 -9.52 -24.99 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_12622748.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 144.755 kcal (2) G-P(sol) polarization free energy of solvation -15.463 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 129.292 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.522 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.986 kcal (6) G-S(sol) free energy of system = (1) + (5) 119.770 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds