Wall clock time and date at job start Tue Mar 9 2021 13:08:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 N 1.30271 * 126.28347 * 2 1 4 4 N 1.28668 * 109.38318 * 179.73506 * 3 2 1 5 5 C 1.30279 * 109.37764 * 0.44095 * 4 3 2 6 6 C 1.50704 * 126.28231 * 179.82919 * 5 4 3 7 7 H 1.08999 * 112.84685 * 168.48972 * 6 5 4 8 8 C 1.53776 * 113.61353 * 299.69205 * 6 5 4 9 9 C 1.53778 * 87.08242 * 140.06292 * 8 6 5 10 10 H 1.08997 * 113.61182 * 89.19831 * 9 8 6 11 11 N 1.46504 * 113.61447 * 220.01458 * 9 8 6 12 12 C 1.34770 * 120.00232 * 204.99812 * 11 9 8 13 13 O 1.21627 * 119.99930 * 0.02562 * 12 11 9 14 14 C 1.47284 * 120.00296 * 180.02562 * 12 11 9 15 15 C 1.40369 * 120.04915 * 180.02562 * 14 12 11 16 16 O 1.35679 * 120.13536 * 0.04331 * 15 14 12 17 17 C 1.38317 * 119.72809 * 180.02562 * 15 14 12 18 18 C 1.39565 * 119.81263 * 0.02562 * 17 15 14 19 19 C 1.47570 * 119.95579 * 179.97438 * 18 17 15 20 20 C 1.36115 * 125.94219 * 179.97438 * 19 18 17 21 21 C 1.40797 * 106.72767 * 179.97438 * 20 19 18 22 22 C 1.34828 * 107.05339 * 0.02562 * 21 20 19 23 23 C 1.50704 * 125.65392 * 180.02562 * 22 21 20 24 24 O 1.42901 * 109.47055 * 64.94671 * 23 22 21 25 25 Si 1.86298 * 109.47325 * 184.94819 * 23 22 21 26 26 O 1.34228 * 108.69468 * 359.97438 * 22 21 20 27 27 C 1.39963 * 120.09139 * 0.27161 * 18 17 15 28 28 C 1.36395 * 120.27705 * 359.44677 * 27 18 17 29 29 C 1.53779 * 87.08070 * 334.56622 * 9 8 6 30 30 O 1.34359 * 107.43494 * 359.56599 * 5 4 3 31 31 H 1.09005 * 109.46593 * 270.00055 * 1 2 3 32 32 H 1.08994 * 109.47376 * 29.99834 * 1 2 3 33 33 H 1.08994 * 109.46994 * 150.00549 * 1 2 3 34 34 H 1.09005 * 113.61509 * 25.51316 * 8 6 5 35 35 H 1.08998 * 113.68834 * 254.62291 * 8 6 5 36 36 H 0.97001 * 119.99551 * 25.00242 * 11 9 8 37 37 H 0.96701 * 113.99733 * 269.97770 * 16 15 14 38 38 H 1.08003 * 120.09562 * 180.02562 * 17 15 14 39 39 H 1.07994 * 126.63208 * 359.71635 * 20 19 18 40 40 H 1.08003 * 126.47242 * 179.97438 * 21 20 19 41 41 H 1.09002 * 109.47084 * 304.94960 * 23 22 21 42 42 H 0.96698 * 113.99867 * 180.02562 * 24 23 22 43 43 H 1.48503 * 109.99991 * 300.00257 * 25 23 22 44 44 H 1.48505 * 109.99904 * 61.31895 * 25 23 22 45 45 H 1.07998 * 119.86434 * 179.70521 * 27 18 17 46 46 H 1.07997 * 119.91271 * 180.27829 * 28 27 18 47 47 H 1.08999 * 113.61515 * 139.98194 * 29 9 8 48 48 H 1.08999 * 113.61367 * 270.88393 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2780 1.0501 0.0000 4 7 3.5091 0.6761 0.0056 5 6 3.5654 -0.6255 -0.0001 6 6 4.8177 -1.4639 -0.0001 7 1 4.6212 -2.5181 0.1950 8 6 5.7215 -1.2212 -1.2203 9 6 6.9158 -1.3203 -0.2568 10 1 7.2939 -2.3351 -0.1331 11 7 7.9761 -0.3482 -0.5344 12 6 9.2430 -0.6056 -0.1536 13 8 9.5062 -1.6453 0.4200 14 6 10.3088 0.3720 -0.4322 15 6 11.6288 0.1046 -0.0365 16 8 11.9268 -1.0546 0.6024 17 6 12.6245 1.0276 -0.3010 18 6 12.3103 2.2179 -0.9585 19 6 13.3700 3.2051 -1.2418 20 6 13.2014 4.3992 -1.8729 21 6 14.4681 5.0115 -1.9267 22 6 15.3392 4.1708 -1.3331 23 6 16.8163 4.4146 -1.1602 24 8 17.0163 5.5325 -0.2928 25 14 17.6126 2.9026 -0.4182 26 8 14.6725 3.0813 -0.9206 27 6 10.9905 2.4794 -1.3441 28 6 10.0067 1.5693 -1.0902 29 6 5.9524 -0.8797 0.8578 30 8 2.3022 -1.0831 0.0000 31 1 -0.3633 0.0000 1.0277 32 1 -0.3634 0.8899 -0.5138 33 1 -0.3633 -0.8900 -0.5137 34 1 5.5995 -0.2332 -1.6644 35 1 5.6872 -2.0236 -1.9572 36 1 7.7662 0.4808 -0.9922 37 1 11.8592 -1.0015 1.5656 38 1 13.6421 0.8277 0.0004 39 1 12.2759 4.7978 -2.2612 40 1 14.6987 5.9726 -2.3621 41 1 17.2663 4.6229 -2.1309 42 1 17.9460 5.7476 -0.1365 43 1 17.0078 2.6079 0.9057 44 1 17.4392 1.7400 -1.3259 45 1 10.7507 3.4038 -1.8484 46 1 8.9911 1.7752 -1.3943 47 1 6.1037 -1.4073 1.7996 48 1 5.8936 0.2016 0.9819 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_12807986.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:28 Heat of formation + Delta-G solvation = 15.104008 kcal Electronic energy + Delta-G solvation = -35196.765155 eV Core-core repulsion = 30188.972443 eV Total energy + Delta-G solvation = -5007.792713 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.140 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -45.22699 -43.75772 -41.69119 -40.57336 -39.01761 -38.04808 -37.81389 -37.14465 -35.00467 -34.26328 -33.81173 -33.16410 -31.36904 -30.62918 -29.66352 -27.38846 -27.03121 -26.51601 -24.60972 -24.09947 -23.71145 -23.31782 -22.38872 -21.85226 -21.30431 -21.05801 -19.63376 -18.75750 -18.69053 -18.56231 -18.40101 -17.98368 -17.47849 -17.11430 -16.76693 -16.57754 -16.48797 -16.07441 -15.97509 -15.86595 -15.58560 -15.47885 -15.12830 -14.67704 -14.49978 -14.46294 -14.21925 -14.09939 -13.93386 -13.88251 -13.81725 -13.75939 -13.58590 -13.50123 -13.32904 -12.86368 -12.81181 -12.74374 -12.68169 -12.41295 -12.09555 -12.03210 -11.88113 -11.81177 -11.14253 -10.80736 -10.72200 -10.50510 -10.42737 -10.13500 -9.98231 -9.02698 -5.13810 -0.80877 0.09219 0.10993 0.62384 1.09401 1.18177 1.35414 1.36851 1.54365 1.64169 1.94603 1.98969 2.03735 2.60527 2.72931 2.97798 3.09672 3.20270 3.24423 3.41421 3.49116 3.55045 3.58066 3.59976 3.62300 3.75073 3.89055 3.92622 3.96470 4.10584 4.19795 4.20597 4.26425 4.32059 4.37039 4.37318 4.49137 4.50374 4.55542 4.60484 4.64548 4.66267 4.74844 4.76433 4.77487 4.81943 4.97717 5.00561 5.07419 5.15611 5.37076 5.39138 5.45035 5.96057 6.39822 6.41670 6.66376 7.16896 7.31070 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.163 3.837 3 N -0.289 5.289 4 N -0.282 5.282 5 C 0.174 3.826 6 C -0.021 4.021 7 H 0.128 0.872 8 C -0.131 4.131 9 C 0.130 3.870 10 H 0.126 0.874 11 N -0.717 5.717 12 C 0.562 3.438 13 O -0.516 6.516 14 C -0.166 4.166 15 C 0.180 3.820 16 O -0.474 6.474 17 C -0.143 4.143 18 C 0.032 3.968 19 C 0.021 3.979 20 C -0.174 4.174 21 C -0.168 4.168 22 C -0.003 4.003 23 C -0.036 4.036 24 O -0.543 6.543 25 Si 0.705 3.295 26 O -0.169 6.169 27 C -0.115 4.115 28 C -0.062 4.062 29 C -0.135 4.135 30 O -0.225 6.225 31 H 0.101 0.899 32 H 0.108 0.892 33 H 0.094 0.906 34 H 0.099 0.901 35 H 0.091 0.909 36 H 0.402 0.598 37 H 0.399 0.601 38 H 0.140 0.860 39 H 0.159 0.841 40 H 0.158 0.842 41 H 0.096 0.904 42 H 0.391 0.609 43 H -0.249 1.249 44 H -0.252 1.252 45 H 0.140 0.860 46 H 0.138 0.862 47 H 0.087 0.913 48 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.141 1.821 -1.895 2.631 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.048 4.048 3 N -0.136 5.136 4 N -0.128 5.128 5 C -0.037 4.037 6 C -0.042 4.042 7 H 0.146 0.854 8 C -0.170 4.170 9 C 0.025 3.975 10 H 0.144 0.856 11 N -0.369 5.369 12 C 0.350 3.650 13 O -0.392 6.392 14 C -0.170 4.170 15 C 0.133 3.867 16 O -0.286 6.286 17 C -0.161 4.161 18 C 0.031 3.969 19 C -0.028 4.028 20 C -0.193 4.193 21 C -0.187 4.187 22 C -0.052 4.052 23 C -0.145 4.145 24 O -0.350 6.350 25 Si 0.605 3.395 26 O -0.067 6.067 27 C -0.133 4.133 28 C -0.081 4.081 29 C -0.174 4.174 30 O -0.104 6.104 31 H 0.119 0.881 32 H 0.127 0.873 33 H 0.113 0.887 34 H 0.117 0.883 35 H 0.110 0.890 36 H 0.239 0.761 37 H 0.258 0.742 38 H 0.158 0.842 39 H 0.177 0.823 40 H 0.176 0.824 41 H 0.114 0.886 42 H 0.240 0.760 43 H -0.173 1.173 44 H -0.176 1.176 45 H 0.158 0.842 46 H 0.156 0.844 47 H 0.106 0.894 48 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges 0.140 0.999 -1.575 1.871 hybrid contribution -1.197 -0.104 -0.177 1.215 sum -1.057 0.895 -1.752 2.233 Atomic orbital electron populations 1.20407 0.79976 1.05944 1.05496 1.28105 0.97958 0.79505 0.99184 1.74439 0.95954 1.25528 1.17666 1.74313 1.12388 1.08985 1.17152 1.27693 0.84688 0.91617 0.99717 1.20997 0.84067 0.98560 1.00555 0.85388 1.23504 0.92866 1.04514 0.96085 1.22356 0.85177 0.94974 0.94987 0.85581 1.45822 1.07282 1.22725 1.61064 1.17979 0.82099 0.86126 0.78797 1.90845 1.82254 1.25629 1.40504 1.20458 0.93728 0.96527 1.06274 1.18261 0.89617 0.85035 0.93762 1.84770 1.90329 1.29167 1.24295 1.21566 1.00533 0.92673 1.01358 1.17771 0.90500 0.91499 0.97136 1.20357 0.81398 0.96790 1.04291 1.21920 0.99594 0.94338 1.03495 1.21553 0.91794 1.01289 1.04057 1.21458 0.94074 0.87285 1.02423 1.23795 0.90580 1.01012 0.99132 1.86465 1.31903 1.48856 1.67814 0.95285 0.87991 0.75219 0.81038 1.83955 1.19178 1.39683 1.63836 1.20710 0.90536 1.00704 1.01371 1.20840 0.99734 0.91772 0.95767 1.23633 0.91878 1.03315 0.98615 1.84791 1.17563 1.38452 1.69613 0.88094 0.87328 0.88718 0.88250 0.89028 0.76150 0.74221 0.84220 0.82332 0.82446 0.88596 0.76010 1.17283 1.17598 0.84213 0.84419 0.89414 0.87816 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.18 10.51 36.01 0.38 0.56 16 2 C 0.16 0.27 8.48 -12.94 -0.11 0.16 16 3 N -0.29 -1.27 12.22 32.55 0.40 -0.87 16 4 N -0.28 -1.12 11.83 32.55 0.39 -0.74 16 5 C 0.17 0.31 7.54 -12.94 -0.10 0.21 16 6 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 7 H 0.13 -0.41 8.14 -51.93 -0.42 -0.84 16 8 C -0.13 0.31 7.38 -25.92 -0.19 0.11 16 9 C 0.13 -0.16 4.24 -67.12 -0.28 -0.45 16 10 H 0.13 -0.05 7.46 -51.93 -0.39 -0.43 16 11 N -0.72 0.49 5.30 -54.14 -0.29 0.20 16 12 C 0.56 1.34 7.75 -12.59 -0.10 1.24 16 13 O -0.52 -2.95 14.74 -16.71 -0.25 -3.20 16 14 C -0.17 -0.27 5.89 -104.79 -0.62 -0.89 16 15 C 0.18 0.50 6.71 -38.75 -0.26 0.24 16 16 O -0.47 -1.57 11.56 -40.70 -0.47 -2.04 16 17 C -0.14 -0.37 9.65 -39.06 -0.38 -0.75 16 18 C 0.03 0.06 5.87 -104.95 -0.62 -0.55 16 19 C 0.02 0.06 7.02 -36.54 -0.26 -0.19 16 20 C -0.17 -0.28 10.26 -39.38 -0.40 -0.68 16 21 C -0.17 -0.35 10.78 -39.82 -0.43 -0.78 16 22 C 0.00 -0.01 6.24 -35.52 -0.22 -0.23 16 23 C -0.04 0.01 2.97 36.01 0.11 0.12 16 24 O -0.54 0.22 12.86 -35.23 -0.45 -0.23 16 25 Si 0.71 -0.50 32.11 -169.99 -5.46 -5.96 16 26 O -0.17 -0.73 8.79 4.75 0.04 -0.69 16 27 C -0.12 0.04 9.48 -39.60 -0.38 -0.34 16 28 C -0.06 0.05 9.47 -39.61 -0.38 -0.32 16 29 C -0.14 0.16 7.42 -25.92 -0.19 -0.04 16 30 O -0.22 -0.46 10.87 5.39 0.06 -0.40 16 31 H 0.10 -0.43 8.14 -51.93 -0.42 -0.85 16 32 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 33 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 34 H 0.10 -0.20 8.07 -51.93 -0.42 -0.62 16 35 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 36 H 0.40 -1.17 6.73 -40.82 -0.27 -1.44 16 37 H 0.40 -0.19 9.06 45.56 0.41 0.22 16 38 H 0.14 0.36 7.90 -52.48 -0.41 -0.05 16 39 H 0.16 -0.20 7.24 -52.49 -0.38 -0.58 16 40 H 0.16 0.03 8.06 -52.48 -0.42 -0.39 16 41 H 0.10 -0.27 7.96 -51.93 -0.41 -0.69 16 42 H 0.39 -2.31 8.74 45.56 0.40 -1.92 16 43 H -0.25 -0.79 7.11 56.52 0.40 -0.39 16 44 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 45 H 0.14 -0.38 6.95 -52.49 -0.37 -0.74 16 46 H 0.14 -0.54 6.38 -52.49 -0.33 -0.88 16 47 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 48 H 0.10 -0.01 7.78 -51.93 -0.40 -0.41 16 LS Contribution 417.64 15.07 6.29 6.29 Total: 0.00 -14.42 417.64 -9.29 -23.71 By element: Atomic # 1 Polarization: -8.41 SS G_CDS: -4.74 Total: -13.14 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: -4.81 Total: -2.92 kcal Atomic # 7 Polarization: -1.91 SS G_CDS: 0.50 Total: -1.41 kcal Atomic # 8 Polarization: -5.50 SS G_CDS: -1.07 Total: -6.57 kcal Atomic # 14 Polarization: -0.50 SS G_CDS: -5.46 Total: -5.96 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -14.42 -9.29 -23.71 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_12807986.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.814 kcal (2) G-P(sol) polarization free energy of solvation -14.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.390 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.286 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.710 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.104 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds