Wall clock time and date at job start Tue Mar 9 2021 13:08:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 N 1.30271 * 126.28347 * 2 1 4 4 N 1.28668 * 109.38318 * 179.73506 * 3 2 1 5 5 C 1.30279 * 109.37764 * 0.44095 * 4 3 2 6 6 C 1.50704 * 126.28231 * 179.82919 * 5 4 3 7 7 H 1.08999 * 112.84685 * 168.48972 * 6 5 4 8 8 C 1.53776 * 113.61353 * 299.69205 * 6 5 4 9 9 C 1.53778 * 87.08242 * 140.06292 * 8 6 5 10 10 H 1.08997 * 113.61182 * 89.19831 * 9 8 6 11 11 N 1.46504 * 113.61447 * 220.01458 * 9 8 6 12 12 C 1.34770 * 120.00232 * 204.99812 * 11 9 8 13 13 O 1.21627 * 119.99930 * 0.02562 * 12 11 9 14 14 C 1.47284 * 120.00296 * 180.02562 * 12 11 9 15 15 C 1.40369 * 120.04915 * 180.02562 * 14 12 11 16 16 O 1.35679 * 120.13536 * 0.04331 * 15 14 12 17 17 C 1.38317 * 119.72809 * 180.02562 * 15 14 12 18 18 C 1.39565 * 119.81263 * 0.02562 * 17 15 14 19 19 C 1.47570 * 119.95579 * 179.97438 * 18 17 15 20 20 C 1.36115 * 125.94219 * 179.97438 * 19 18 17 21 21 C 1.40797 * 106.72767 * 179.97438 * 20 19 18 22 22 C 1.34828 * 107.05339 * 0.02562 * 21 20 19 23 23 C 1.50704 * 125.65392 * 180.02562 * 22 21 20 24 24 O 1.42901 * 109.47055 * 64.94671 * 23 22 21 25 25 Si 1.86298 * 109.47325 * 184.94819 * 23 22 21 26 26 O 1.34228 * 108.69468 * 359.97438 * 22 21 20 27 27 C 1.39963 * 120.09139 * 0.27161 * 18 17 15 28 28 C 1.36395 * 120.27705 * 359.44677 * 27 18 17 29 29 C 1.53779 * 87.08070 * 334.56622 * 9 8 6 30 30 O 1.34359 * 107.43494 * 359.56599 * 5 4 3 31 31 H 1.09005 * 109.46593 * 270.00055 * 1 2 3 32 32 H 1.08994 * 109.47376 * 29.99834 * 1 2 3 33 33 H 1.08994 * 109.46994 * 150.00549 * 1 2 3 34 34 H 1.09005 * 113.61509 * 25.51316 * 8 6 5 35 35 H 1.08998 * 113.68834 * 254.62291 * 8 6 5 36 36 H 0.97001 * 119.99551 * 25.00242 * 11 9 8 37 37 H 0.96701 * 113.99733 * 269.97770 * 16 15 14 38 38 H 1.08003 * 120.09562 * 180.02562 * 17 15 14 39 39 H 1.07994 * 126.63208 * 359.71635 * 20 19 18 40 40 H 1.08003 * 126.47242 * 179.97438 * 21 20 19 41 41 H 1.09002 * 109.47084 * 304.94960 * 23 22 21 42 42 H 0.96698 * 113.99867 * 180.02562 * 24 23 22 43 43 H 1.48503 * 109.99991 * 300.00257 * 25 23 22 44 44 H 1.48505 * 109.99904 * 61.31895 * 25 23 22 45 45 H 1.07998 * 119.86434 * 179.70521 * 27 18 17 46 46 H 1.07997 * 119.91271 * 180.27829 * 28 27 18 47 47 H 1.08999 * 113.61515 * 139.98194 * 29 9 8 48 48 H 1.08999 * 113.61367 * 270.88393 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2780 1.0501 0.0000 4 7 3.5091 0.6761 0.0056 5 6 3.5654 -0.6255 -0.0001 6 6 4.8177 -1.4639 -0.0001 7 1 4.6212 -2.5181 0.1950 8 6 5.7215 -1.2212 -1.2203 9 6 6.9158 -1.3203 -0.2568 10 1 7.2939 -2.3351 -0.1331 11 7 7.9761 -0.3482 -0.5344 12 6 9.2430 -0.6056 -0.1536 13 8 9.5062 -1.6453 0.4200 14 6 10.3088 0.3720 -0.4322 15 6 11.6288 0.1046 -0.0365 16 8 11.9268 -1.0546 0.6024 17 6 12.6245 1.0276 -0.3010 18 6 12.3103 2.2179 -0.9585 19 6 13.3700 3.2051 -1.2418 20 6 13.2014 4.3992 -1.8729 21 6 14.4681 5.0115 -1.9267 22 6 15.3392 4.1708 -1.3331 23 6 16.8163 4.4146 -1.1602 24 8 17.0163 5.5325 -0.2928 25 14 17.6126 2.9026 -0.4182 26 8 14.6725 3.0813 -0.9206 27 6 10.9905 2.4794 -1.3441 28 6 10.0067 1.5693 -1.0902 29 6 5.9524 -0.8797 0.8578 30 8 2.3022 -1.0831 0.0000 31 1 -0.3633 0.0000 1.0277 32 1 -0.3634 0.8899 -0.5138 33 1 -0.3633 -0.8900 -0.5137 34 1 5.5995 -0.2332 -1.6644 35 1 5.6872 -2.0236 -1.9572 36 1 7.7662 0.4808 -0.9922 37 1 11.8592 -1.0015 1.5656 38 1 13.6421 0.8277 0.0004 39 1 12.2759 4.7978 -2.2612 40 1 14.6987 5.9726 -2.3621 41 1 17.2663 4.6229 -2.1309 42 1 17.9460 5.7476 -0.1365 43 1 17.0078 2.6079 0.9057 44 1 17.4392 1.7400 -1.3259 45 1 10.7507 3.4038 -1.8484 46 1 8.9911 1.7752 -1.3943 47 1 6.1037 -1.4073 1.7996 48 1 5.8936 0.2016 0.9819 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_12807986.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:26 Heat of formation + Delta-G solvation = 6.266144 kcal Electronic energy + Delta-G solvation = -35197.148394 eV Core-core repulsion = 30188.972443 eV Total energy + Delta-G solvation = -5008.175951 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.140 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -45.33128 -43.88752 -41.77775 -40.57714 -39.12838 -38.09763 -37.83362 -37.27639 -35.10973 -34.38115 -33.82617 -33.18326 -31.45212 -30.67588 -29.61299 -27.42995 -26.91380 -26.55191 -24.69094 -24.16294 -23.76039 -23.38128 -22.49903 -21.94959 -21.40607 -21.02099 -19.73529 -18.75895 -18.70079 -18.61686 -18.49784 -18.09264 -17.55859 -17.24819 -16.78516 -16.59671 -16.54076 -16.17029 -16.05145 -15.88177 -15.63367 -15.49040 -15.18933 -14.67330 -14.48769 -14.33241 -14.26912 -14.20866 -14.01462 -13.80452 -13.68006 -13.64921 -13.60303 -13.58651 -13.42136 -12.99093 -12.86553 -12.73370 -12.68755 -12.37157 -12.27518 -12.01926 -11.94735 -11.86692 -11.26007 -10.99258 -10.80625 -10.49778 -10.46552 -10.17719 -10.06743 -9.12905 -5.15579 -0.91016 0.02594 0.04934 0.50963 1.11237 1.17482 1.23618 1.29172 1.48341 1.58256 1.81960 1.95471 2.00785 2.52957 2.75962 2.90213 3.17426 3.19281 3.34472 3.45850 3.47799 3.59098 3.64547 3.68878 3.70476 3.71361 3.87838 3.88966 4.00538 4.09886 4.25513 4.29394 4.33314 4.39253 4.46925 4.52015 4.54496 4.58387 4.60925 4.64645 4.68398 4.69055 4.78239 4.80031 4.86298 4.95127 4.97819 5.01099 5.06577 5.11057 5.33213 5.40418 5.45232 5.84270 6.39898 6.58972 6.80715 7.08492 7.19197 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.168 3.832 3 N -0.331 5.331 4 N -0.310 5.310 5 C 0.175 3.825 6 C -0.019 4.019 7 H 0.149 0.851 8 C -0.118 4.118 9 C 0.129 3.871 10 H 0.119 0.881 11 N -0.702 5.702 12 C 0.561 3.439 13 O -0.558 6.558 14 C -0.177 4.177 15 C 0.164 3.836 16 O -0.494 6.494 17 C -0.160 4.160 18 C 0.023 3.977 19 C -0.005 4.005 20 C -0.167 4.167 21 C -0.174 4.174 22 C -0.031 4.031 23 C -0.035 4.035 24 O -0.559 6.559 25 Si 0.800 3.200 26 O -0.197 6.197 27 C -0.108 4.108 28 C -0.048 4.048 29 C -0.132 4.132 30 O -0.231 6.231 31 H 0.116 0.884 32 H 0.117 0.883 33 H 0.114 0.886 34 H 0.099 0.901 35 H 0.107 0.893 36 H 0.415 0.585 37 H 0.409 0.591 38 H 0.124 0.876 39 H 0.189 0.811 40 H 0.177 0.823 41 H 0.129 0.871 42 H 0.414 0.586 43 H -0.310 1.310 44 H -0.297 1.297 45 H 0.172 0.828 46 H 0.175 0.825 47 H 0.087 0.913 48 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.281 3.202 -3.429 4.864 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.043 4.043 3 N -0.178 5.178 4 N -0.156 5.156 5 C -0.036 4.036 6 C -0.039 4.039 7 H 0.166 0.834 8 C -0.157 4.157 9 C 0.024 3.976 10 H 0.137 0.863 11 N -0.354 5.354 12 C 0.349 3.651 13 O -0.437 6.437 14 C -0.180 4.180 15 C 0.117 3.883 16 O -0.307 6.307 17 C -0.179 4.179 18 C 0.022 3.978 19 C -0.054 4.054 20 C -0.186 4.186 21 C -0.193 4.193 22 C -0.080 4.080 23 C -0.145 4.145 24 O -0.371 6.371 25 Si 0.707 3.293 26 O -0.096 6.096 27 C -0.126 4.126 28 C -0.067 4.067 29 C -0.172 4.172 30 O -0.112 6.112 31 H 0.134 0.866 32 H 0.135 0.865 33 H 0.132 0.868 34 H 0.117 0.883 35 H 0.125 0.875 36 H 0.253 0.747 37 H 0.269 0.731 38 H 0.142 0.858 39 H 0.207 0.793 40 H 0.195 0.805 41 H 0.147 0.853 42 H 0.267 0.733 43 H -0.238 1.238 44 H -0.225 1.225 45 H 0.189 0.811 46 H 0.192 0.808 47 H 0.106 0.894 48 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -1.268 2.451 -3.129 4.172 hybrid contribution -0.808 -0.553 0.356 1.042 sum -2.077 1.898 -2.772 3.950 Atomic orbital electron populations 1.20706 0.76978 1.07294 1.06839 1.28978 0.99351 0.78846 0.97131 1.74369 0.96541 1.27028 1.19835 1.74225 1.12664 1.10156 1.18519 1.28225 0.85379 0.91416 0.98596 1.21216 0.82715 0.99096 1.00885 0.83359 1.23443 0.91293 1.05088 0.95830 1.22362 0.85121 0.94486 0.95617 0.86326 1.45730 1.06401 1.23221 1.60059 1.18121 0.82942 0.85662 0.78346 1.90821 1.82972 1.27304 1.42592 1.20535 0.92955 0.97510 1.07043 1.18427 0.90421 0.84981 0.94450 1.84722 1.90579 1.29985 1.25383 1.21498 0.99963 0.93673 1.02778 1.18000 0.91563 0.90988 0.97229 1.20744 0.81247 0.97916 1.05463 1.22325 1.00664 0.93372 1.02238 1.21906 0.91817 1.01851 1.03753 1.22227 0.95725 0.87254 1.02784 1.23906 0.88861 1.00913 1.00790 1.86412 1.34409 1.48390 1.67871 0.94473 0.86000 0.73179 0.75652 1.83950 1.20170 1.40816 1.64626 1.21065 0.89235 1.01766 1.00492 1.21216 1.01350 0.90187 0.93907 1.23571 0.92105 1.02711 0.98779 1.84813 1.17770 1.38696 1.69872 0.86556 0.86466 0.86789 0.88270 0.87492 0.74678 0.73083 0.85763 0.79337 0.80538 0.85319 0.73285 1.23835 1.22512 0.81072 0.80787 0.89424 0.88794 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.44 10.51 71.24 0.75 1.19 16 2 C 0.17 0.52 8.48 88.34 0.75 1.27 16 3 N -0.33 -3.08 12.22 -165.50 -2.02 -5.10 16 4 N -0.31 -2.62 11.83 -165.50 -1.96 -4.58 16 5 C 0.18 0.61 7.54 88.34 0.67 1.27 16 6 C -0.02 0.07 4.29 -11.01 -0.05 0.02 16 7 H 0.15 -1.13 8.14 -2.39 -0.02 -1.15 16 8 C -0.12 0.67 7.38 31.12 0.23 0.90 16 9 C 0.13 -0.34 4.24 45.52 0.19 -0.15 16 10 H 0.12 -0.05 7.46 -2.39 -0.02 -0.07 16 11 N -0.70 1.17 5.30 -443.44 -2.35 -1.19 16 12 C 0.56 3.12 7.75 86.62 0.67 3.79 16 13 O -0.56 -7.40 14.74 16.88 0.25 -7.15 16 14 C -0.18 -0.72 5.89 -19.97 -0.12 -0.83 16 15 C 0.16 1.31 6.71 22.81 0.15 1.47 16 16 O -0.49 -4.87 11.56 -68.98 -0.80 -5.67 16 17 C -0.16 -1.29 9.65 22.61 0.22 -1.07 16 18 C 0.02 0.11 5.87 -20.08 -0.12 0.00 16 19 C 0.00 -0.03 7.02 24.24 0.17 0.14 16 20 C -0.17 -0.40 10.26 22.40 0.23 -0.17 16 21 C -0.17 -0.60 10.78 22.11 0.24 -0.36 16 22 C -0.03 -0.20 6.24 24.90 0.16 -0.04 16 23 C -0.03 0.03 2.97 71.24 0.21 0.24 16 24 O -0.56 0.88 12.86 -148.98 -1.92 -1.04 16 25 Si 0.80 0.12 32.11 68.60 2.20 2.32 16 26 O -0.20 -2.13 8.79 -5.92 -0.05 -2.18 16 27 C -0.11 0.19 9.48 22.26 0.21 0.41 16 28 C -0.05 0.13 9.47 22.25 0.21 0.35 16 29 C -0.13 0.29 7.42 31.12 0.23 0.52 16 30 O -0.23 -0.87 10.87 -3.62 -0.04 -0.91 16 31 H 0.12 -1.16 8.14 -2.38 -0.02 -1.18 16 32 H 0.12 -1.03 8.14 -2.39 -0.02 -1.05 16 33 H 0.11 -1.25 8.14 -2.39 -0.02 -1.26 16 34 H 0.10 -0.50 8.07 -2.38 -0.02 -0.52 16 35 H 0.11 -0.88 8.14 -2.39 -0.02 -0.90 16 36 H 0.41 -2.96 6.73 -92.71 -0.62 -3.58 16 37 H 0.41 1.08 9.06 -74.06 -0.67 0.41 16 38 H 0.12 1.22 7.90 -2.91 -0.02 1.20 16 39 H 0.19 -0.95 7.24 -2.91 -0.02 -0.97 16 40 H 0.18 -0.23 8.06 -2.91 -0.02 -0.25 16 41 H 0.13 -0.95 7.96 -2.39 -0.02 -0.97 16 42 H 0.41 -5.45 8.74 -74.06 -0.65 -6.10 16 43 H -0.31 -3.14 7.11 99.48 0.71 -2.43 16 44 H -0.30 -2.21 7.11 99.48 0.71 -1.51 16 45 H 0.17 -1.44 6.95 -2.91 -0.02 -1.46 16 46 H 0.17 -1.86 6.38 -2.91 -0.02 -1.88 16 47 H 0.09 -0.19 8.14 -2.39 -0.02 -0.21 16 48 H 0.09 0.02 7.78 -2.39 -0.02 0.00 16 Total: 0.00 -37.93 417.64 -2.51 -40.44 By element: Atomic # 1 Polarization: -23.05 SS G_CDS: -0.83 Total: -23.88 kcal Atomic # 6 Polarization: 3.92 SS G_CDS: 5.00 Total: 8.92 kcal Atomic # 7 Polarization: -4.53 SS G_CDS: -6.33 Total: -10.86 kcal Atomic # 8 Polarization: -14.38 SS G_CDS: -2.55 Total: -16.94 kcal Atomic # 14 Polarization: 0.12 SS G_CDS: 2.20 Total: 2.32 kcal Total: -37.93 -2.51 -40.44 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_12807986.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.705 kcal (2) G-P(sol) polarization free energy of solvation -37.932 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.773 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.507 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.439 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.266 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds