Wall clock time and date at job start Tue Mar 9 2021 13:09:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.30277 * 126.28471 * 2 1 4 4 N 1.28666 * 109.37904 * 180.02562 * 3 2 1 5 5 C 1.30272 * 109.38464 * 0.02562 * 4 3 2 6 6 C 1.50695 * 126.28292 * 179.97438 * 5 4 3 7 7 H 1.09003 * 112.90494 * 191.27439 * 6 5 4 8 8 C 1.53776 * 113.61527 * 322.52541 * 6 5 4 9 9 C 1.53776 * 87.08243 * 139.98283 * 8 6 5 10 10 H 1.09007 * 113.69092 * 89.12976 * 9 8 6 11 11 N 1.46508 * 113.61406 * 220.01750 * 9 8 6 12 12 C 1.34772 * 120.00037 * 252.49446 * 11 9 8 13 13 O 1.21594 * 119.99903 * 0.02562 * 12 11 9 14 14 C 1.47525 * 119.99809 * 179.97438 * 12 11 9 15 15 C 1.39773 * 120.06718 * 180.02562 * 14 12 11 16 16 C 1.37624 * 119.93142 * 179.97438 * 15 14 12 17 17 C 1.50699 * 119.97017 * 179.97438 * 16 15 14 18 18 O 1.42904 * 109.47098 * 105.01773 * 17 16 15 19 19 Si 1.86301 * 109.46718 * 345.02146 * 17 16 15 20 20 C 1.39197 * 120.06754 * 0.02562 * 16 15 14 21 21 N 1.39055 * 119.93420 * 179.97438 * 20 16 15 22 22 C 1.46901 * 110.99854 * 240.00121 * 21 20 16 23 23 C 1.46898 * 110.99970 * 116.04285 * 21 20 16 24 24 C 1.39239 * 120.14015 * 0.25111 * 20 16 15 25 25 C 1.37593 * 120.06312 * 359.45066 * 24 20 16 26 26 C 1.53774 * 87.08086 * 334.56873 * 9 8 6 27 27 O 1.34360 * 126.27804 * 180.29903 * 2 1 3 28 28 H 1.08995 * 109.47199 * 89.96528 * 1 2 3 29 29 H 1.08997 * 109.47081 * 209.97397 * 1 2 3 30 30 H 1.09002 * 109.46747 * 329.97197 * 1 2 3 31 31 H 1.08999 * 113.61690 * 25.43098 * 8 6 5 32 32 H 1.09002 * 113.61818 * 254.53313 * 8 6 5 33 33 H 0.97000 * 119.99287 * 72.49855 * 11 9 8 34 34 H 1.07999 * 120.03740 * 359.95644 * 15 14 12 35 35 H 1.09000 * 109.47455 * 225.02377 * 17 16 15 36 36 H 0.96697 * 113.99511 * 60.01092 * 18 17 16 37 37 H 1.48504 * 109.99886 * 178.68060 * 19 17 16 38 38 H 1.48498 * 110.00276 * 299.99723 * 19 17 16 39 39 H 1.09002 * 109.47401 * 59.99571 * 22 21 20 40 40 H 1.09001 * 109.46874 * 299.99584 * 22 21 20 41 41 H 1.09004 * 109.46970 * 179.97438 * 22 21 20 42 42 H 1.09006 * 109.46770 * 179.97438 * 23 21 20 43 43 H 1.09001 * 109.47456 * 300.00115 * 23 21 20 44 44 H 1.09000 * 109.46814 * 60.00421 * 23 21 20 45 45 H 1.08003 * 119.96864 * 179.70390 * 24 20 16 46 46 H 1.08003 * 120.02921 * 180.27185 * 25 24 20 47 47 H 1.08996 * 113.61735 * 139.98545 * 26 9 8 48 48 H 1.09004 * 113.61585 * 270.88191 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2780 1.0501 0.0000 4 7 3.5091 0.6760 -0.0005 5 6 3.5654 -0.6255 -0.0015 6 6 4.8176 -1.4639 -0.0029 7 1 4.6222 -2.5180 -0.1998 8 6 5.9510 -0.8769 -0.8605 9 6 6.9158 -1.3185 0.2526 10 1 7.2950 -2.3327 0.1266 11 7 7.9752 -0.3456 0.5312 12 6 9.2421 -0.6010 0.1490 13 8 9.5058 -1.6387 -0.4273 14 6 10.3087 0.3789 0.4291 15 6 11.6231 0.1157 0.0330 16 6 12.6158 1.0321 0.2951 17 6 14.0333 0.7490 -0.1310 18 8 14.3536 1.5413 -1.2764 19 14 14.2047 -1.0565 -0.5573 20 6 12.3122 2.2198 0.9546 21 7 13.3175 3.1435 1.2185 22 6 13.4494 3.3798 2.6624 23 6 13.0788 4.4015 0.4987 24 6 11.0049 2.4823 1.3556 25 6 10.0069 1.5729 1.0909 26 6 5.7220 -1.2225 1.2172 27 8 2.3021 -1.0831 -0.0057 28 1 -0.3633 0.0006 -1.0276 29 1 -0.3633 -0.8902 0.5134 30 1 -0.3633 0.8898 0.5143 31 1 5.8910 0.2046 -0.9826 32 1 6.1023 -1.4025 -1.8034 33 1 7.7646 0.4823 0.9907 34 1 11.8594 -0.8059 -0.4781 35 1 14.7140 0.9961 0.6837 36 1 14.2856 2.4942 -1.1269 37 1 15.5900 -1.3423 -1.0096 38 1 13.8743 -1.8912 0.6256 39 1 13.6950 2.4433 3.1630 40 1 12.5085 3.7657 3.0548 41 1 14.2428 4.1057 2.8408 42 1 13.8795 5.1062 0.7233 43 1 13.0550 4.2077 -0.5737 44 1 12.1245 4.8243 0.8128 45 1 10.7733 3.4026 1.8713 46 1 8.9923 1.7791 1.3983 47 1 5.6884 -2.0271 1.9517 48 1 5.5993 -0.2355 1.6632 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_13422196.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:18 Heat of formation + Delta-G solvation = 40.542890 kcal Electronic energy + Delta-G solvation = -31451.123555 eV Core-core repulsion = 27089.975611 eV Total energy + Delta-G solvation = -4361.147943 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -45.31575 -41.80974 -40.92671 -39.51024 -37.69372 -37.29998 -37.25953 -35.05919 -33.66596 -32.70950 -31.34316 -29.62058 -28.60044 -27.14904 -26.92767 -26.87779 -25.86915 -23.95798 -23.55766 -23.08583 -22.72269 -21.30033 -20.81738 -19.07267 -18.64215 -18.50098 -17.99031 -17.81000 -17.47722 -16.89289 -16.49500 -16.39864 -16.01820 -15.92364 -15.71939 -15.49026 -15.31501 -15.16671 -14.76416 -14.50147 -14.27353 -14.18203 -13.95037 -13.76724 -13.64049 -13.59995 -13.52215 -13.41217 -13.09876 -12.99607 -12.97455 -12.73282 -12.68177 -12.63583 -12.32671 -12.19250 -11.92059 -11.86683 -11.40200 -11.27601 -11.01678 -10.48134 -10.21580 -10.09629 -9.79859 -9.63377 -4.91664 -0.41191 0.06563 0.14683 1.19463 1.25041 1.33517 1.54520 1.65875 1.87214 2.05676 2.61594 2.72043 2.78049 3.20705 3.37570 3.46648 3.52387 3.63603 3.67565 3.71048 3.74272 3.90280 4.01878 4.02917 4.11292 4.18862 4.30756 4.33886 4.38714 4.41754 4.44886 4.52147 4.52826 4.56664 4.63808 4.64476 4.67497 4.69567 4.74775 4.83217 4.90251 4.92568 4.96409 5.00998 5.02135 5.08727 5.14270 5.20807 5.44625 5.53678 5.74911 6.18711 6.42616 6.63080 7.09810 7.20695 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.167 3.833 3 N -0.331 5.331 4 N -0.312 5.312 5 C 0.176 3.824 6 C -0.019 4.019 7 H 0.150 0.850 8 C -0.133 4.133 9 C 0.129 3.871 10 H 0.123 0.877 11 N -0.702 5.702 12 C 0.562 3.438 13 O -0.567 6.567 14 C -0.146 4.146 15 C -0.057 4.057 16 C -0.113 4.113 17 C -0.059 4.059 18 O -0.544 6.544 19 Si 0.775 3.225 20 C 0.125 3.875 21 N -0.527 5.527 22 C 0.025 3.975 23 C 0.023 3.977 24 C -0.153 4.153 25 C -0.060 4.060 26 C -0.118 4.118 27 O -0.231 6.231 28 H 0.116 0.884 29 H 0.114 0.886 30 H 0.116 0.884 31 H 0.092 0.908 32 H 0.089 0.911 33 H 0.414 0.586 34 H 0.140 0.860 35 H 0.080 0.920 36 H 0.373 0.627 37 H -0.287 1.287 38 H -0.272 1.272 39 H 0.063 0.937 40 H 0.044 0.956 41 H 0.087 0.913 42 H 0.088 0.912 43 H 0.073 0.927 44 H 0.041 0.959 45 H 0.149 0.851 46 H 0.158 0.842 47 H 0.108 0.892 48 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.610 1.895 3.596 6.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.044 4.044 3 N -0.178 5.178 4 N -0.157 5.157 5 C -0.035 4.035 6 C -0.040 4.040 7 H 0.168 0.832 8 C -0.173 4.173 9 C 0.024 3.976 10 H 0.141 0.859 11 N -0.353 5.353 12 C 0.350 3.650 13 O -0.447 6.447 14 C -0.150 4.150 15 C -0.076 4.076 16 C -0.114 4.114 17 C -0.169 4.169 18 O -0.351 6.351 19 Si 0.678 3.322 20 C 0.031 3.969 21 N -0.249 5.249 22 C -0.121 4.121 23 C -0.123 4.123 24 C -0.173 4.173 25 C -0.079 4.079 26 C -0.157 4.157 27 O -0.111 6.111 28 H 0.134 0.866 29 H 0.132 0.868 30 H 0.135 0.865 31 H 0.110 0.890 32 H 0.108 0.892 33 H 0.252 0.748 34 H 0.157 0.843 35 H 0.097 0.903 36 H 0.222 0.778 37 H -0.214 1.214 38 H -0.198 1.198 39 H 0.082 0.918 40 H 0.063 0.937 41 H 0.106 0.894 42 H 0.107 0.893 43 H 0.092 0.908 44 H 0.060 0.940 45 H 0.167 0.833 46 H 0.175 0.825 47 H 0.126 0.874 48 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -4.118 0.936 2.953 5.153 hybrid contribution -0.783 0.963 1.374 1.852 sum -4.901 1.899 4.327 6.808 Atomic orbital electron populations 1.20698 0.77009 1.07258 1.06822 1.28970 0.99345 0.78872 0.97178 1.74370 0.96544 1.27036 1.19829 1.74219 1.12668 1.10229 1.18607 1.28258 0.85395 0.91405 0.98476 1.21245 0.82651 0.99153 1.00923 0.83203 1.23578 0.92141 1.02630 0.98931 1.22397 0.85122 0.94625 0.95457 0.85874 1.45748 1.06602 1.23247 1.59752 1.18324 0.83097 0.85685 0.77855 1.90793 1.83146 1.27855 1.42946 1.19892 0.93586 0.96610 1.04871 1.21084 0.91605 0.98564 0.96375 1.20194 0.96402 0.94456 1.00362 1.25185 0.92343 1.07911 0.91437 1.86696 1.91441 1.22062 1.34939 0.92259 0.82150 0.72107 0.85682 1.18971 0.90162 0.92581 0.95215 1.59464 1.43028 1.11384 1.11005 1.22526 1.02039 1.02524 0.85033 1.22592 1.01664 0.89067 0.98976 1.21809 0.92640 1.01079 1.01799 1.21445 1.00714 0.91249 0.94501 1.23441 0.91418 1.04978 0.95856 1.84815 1.17787 1.38670 1.69876 0.86572 0.86791 0.86529 0.88979 0.89237 0.74778 0.84298 0.90287 0.77765 1.21424 1.19803 0.91819 0.93739 0.89443 0.89305 0.90812 0.93991 0.83338 0.82490 0.87392 0.88519 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.45 10.51 71.24 0.75 1.20 16 2 C 0.17 0.47 8.48 88.34 0.75 1.22 16 3 N -0.33 -3.00 12.22 -165.50 -2.02 -5.02 16 4 N -0.31 -2.56 11.83 -165.50 -1.96 -4.52 16 5 C 0.18 0.54 7.53 88.34 0.67 1.20 16 6 C -0.02 0.08 4.29 -11.02 -0.05 0.03 16 7 H 0.15 -1.28 8.14 -2.39 -0.02 -1.30 16 8 C -0.13 0.39 7.42 31.12 0.23 0.62 16 9 C 0.13 -0.49 4.24 45.51 0.19 -0.29 16 10 H 0.12 -0.28 7.46 -2.38 -0.02 -0.29 16 11 N -0.70 1.88 5.30 -443.21 -2.35 -0.47 16 12 C 0.56 2.11 7.76 86.69 0.67 2.78 16 13 O -0.57 -6.24 15.94 -4.01 -0.06 -6.30 16 14 C -0.15 -0.30 5.88 -20.08 -0.12 -0.42 16 15 C -0.06 -0.26 8.19 22.50 0.18 -0.07 16 16 C -0.11 -0.38 5.28 -19.78 -0.10 -0.48 16 17 C -0.06 -0.26 2.29 71.24 0.16 -0.10 16 18 O -0.54 -2.91 12.65 -148.98 -1.89 -4.80 16 19 Si 0.77 4.14 30.17 68.60 2.07 6.21 16 20 C 0.13 0.02 4.66 38.47 0.18 0.20 16 21 N -0.53 1.08 3.70 -745.08 -2.76 -1.68 16 22 C 0.02 -0.10 9.33 127.69 1.19 1.09 16 23 C 0.02 -0.12 9.10 127.69 1.16 1.04 16 24 C -0.15 0.45 8.53 22.36 0.19 0.64 16 25 C -0.06 0.20 9.53 22.50 0.21 0.41 16 26 C -0.12 0.76 7.38 31.12 0.23 0.99 16 27 O -0.23 -0.78 10.87 -3.69 -0.04 -0.82 16 28 H 0.12 -1.18 8.14 -2.39 -0.02 -1.20 16 29 H 0.11 -1.27 8.14 -2.39 -0.02 -1.29 16 30 H 0.12 -1.04 8.14 -2.39 -0.02 -1.06 16 31 H 0.09 -0.01 7.78 -2.39 -0.02 -0.03 16 32 H 0.09 -0.26 8.14 -2.39 -0.02 -0.28 16 33 H 0.41 -3.10 6.75 -92.71 -0.63 -3.72 16 34 H 0.14 0.70 4.70 -2.91 -0.01 0.68 16 35 H 0.08 0.35 7.77 -2.39 -0.02 0.33 16 36 H 0.37 0.37 7.48 -74.06 -0.55 -0.19 16 37 H -0.29 -3.11 7.11 99.48 0.71 -2.41 16 38 H -0.27 -2.34 7.11 99.48 0.71 -1.63 16 39 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 40 H 0.04 -0.26 7.08 -2.39 -0.02 -0.28 16 41 H 0.09 -0.52 8.12 -2.38 -0.02 -0.54 16 42 H 0.09 -0.62 8.12 -2.38 -0.02 -0.64 16 43 H 0.07 -0.36 7.41 -2.39 -0.02 -0.38 16 44 H 0.04 -0.26 7.33 -2.39 -0.02 -0.28 16 45 H 0.15 -1.01 6.99 -2.91 -0.02 -1.03 16 46 H 0.16 -1.51 6.39 -2.91 -0.02 -1.53 16 47 H 0.11 -1.00 8.14 -2.39 -0.02 -1.01 16 48 H 0.10 -0.53 8.07 -2.39 -0.02 -0.55 16 Total: 0.00 -23.49 395.75 -2.63 -26.12 By element: Atomic # 1 Polarization: -18.67 SS G_CDS: -0.12 Total: -18.79 kcal Atomic # 6 Polarization: 3.56 SS G_CDS: 6.51 Total: 10.07 kcal Atomic # 7 Polarization: -2.59 SS G_CDS: -9.09 Total: -11.69 kcal Atomic # 8 Polarization: -9.93 SS G_CDS: -1.99 Total: -11.92 kcal Atomic # 14 Polarization: 4.14 SS G_CDS: 2.07 Total: 6.21 kcal Total: -23.49 -2.63 -26.12 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_13422196.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.659 kcal (2) G-P(sol) polarization free energy of solvation -23.491 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.625 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.117 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.543 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds