Wall clock time and date at job start Tue Mar 9 2021 13:09:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.30272 * 126.28137 * 2 1 4 4 N 1.28674 * 109.37817 * 179.82904 * 3 2 1 5 5 C 1.30271 * 109.38072 * 0.43967 * 4 3 2 6 6 C 1.50702 * 126.28041 * 179.73255 * 5 4 3 7 7 H 1.09004 * 112.84641 * 191.19505 * 6 5 4 8 8 C 1.53774 * 113.61387 * 322.50474 * 6 5 4 9 9 C 1.53776 * 87.08036 * 139.98414 * 8 6 5 10 10 H 1.09002 * 113.69566 * 89.12892 * 9 8 6 11 11 N 1.46500 * 113.61207 * 220.01812 * 9 8 6 12 12 C 1.34779 * 120.00225 * 252.48865 * 11 9 8 13 13 O 1.21658 * 119.99866 * 0.02562 * 12 11 9 14 14 C 1.47038 * 120.00226 * 179.97438 * 12 11 9 15 15 C 1.36227 * 123.49574 * 179.71033 * 14 12 11 16 16 Cl 1.73606 * 124.60101 * 0.02604 * 15 14 12 17 17 S 1.70447 * 110.79341 * 179.90007 * 15 14 12 18 18 C 1.75493 * 92.46481 * 0.31514 * 17 15 14 19 19 C 1.50699 * 124.68556 * 179.85718 * 18 17 15 20 20 O 1.42897 * 109.47355 * 244.95742 * 19 18 17 21 21 Si 1.86293 * 109.47255 * 4.96137 * 19 18 17 22 22 C 1.32695 * 110.63105 * 359.82279 * 18 17 15 23 23 C 1.53781 * 113.61440 * 60.00574 * 6 5 4 24 24 O 1.34363 * 126.28113 * 180.31067 * 2 1 3 25 25 H 1.09002 * 109.47152 * 269.69039 * 1 2 3 26 26 H 1.09001 * 109.46980 * 149.69140 * 1 2 3 27 27 H 1.09004 * 109.47113 * 29.69120 * 1 2 3 28 28 H 1.09006 * 113.61262 * 254.52753 * 8 6 5 29 29 H 1.08993 * 113.61648 * 25.43026 * 8 6 5 30 30 H 0.97008 * 120.00211 * 72.49895 * 11 9 8 31 31 H 1.09000 * 109.46702 * 124.96081 * 19 18 17 32 32 H 0.96705 * 113.99441 * 59.99926 * 20 19 18 33 33 H 1.48493 * 110.00293 * 179.97438 * 21 19 18 34 34 H 1.48504 * 109.99997 * 301.31936 * 21 19 18 35 35 H 1.08004 * 123.45523 * 180.02562 * 22 18 17 36 36 H 1.08999 * 113.60803 * 334.56212 * 23 6 5 37 37 H 1.08997 * 113.61388 * 105.38501 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0501 0.0000 4 7 3.5091 0.6760 0.0036 5 6 3.5654 -0.6254 -0.0034 6 6 4.8177 -1.4638 -0.0079 7 1 4.6212 -2.5170 -0.2086 8 6 5.9514 -0.8730 -0.8624 9 6 6.9157 -1.3195 0.2491 10 1 7.2950 -2.3331 0.1189 11 7 7.9748 -0.3478 0.5324 12 6 9.2421 -0.6015 0.1499 13 8 9.5063 -1.6372 -0.4312 14 6 10.3050 0.3740 0.4337 15 6 11.6087 0.1881 0.0849 16 17 12.2183 -1.2119 -0.7410 17 16 12.5594 1.5183 0.5664 18 6 11.1798 2.3484 1.2645 19 6 11.2399 3.6954 1.9375 20 8 10.9122 3.5518 3.3210 21 14 12.9593 4.3942 1.7759 22 6 10.0762 1.6265 1.1173 23 6 5.7215 -1.2277 1.2137 24 8 2.3021 -1.0831 -0.0059 25 1 -0.3633 -0.0056 1.0277 26 1 -0.3633 -0.8872 -0.5186 27 1 -0.3633 0.8928 -0.5090 28 1 6.1031 -1.3945 -1.8075 29 1 5.8913 0.2090 -0.9798 30 1 7.7642 0.4781 0.9955 31 1 10.5273 4.3705 1.4636 32 1 11.5062 2.9633 3.8068 33 1 13.0316 5.7228 2.4351 34 1 13.9439 3.4676 2.3902 35 1 9.1061 1.9428 1.4715 36 1 5.5985 -0.2427 1.6638 37 1 5.6864 -2.0349 1.9453 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_13431040.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:25 Heat of formation + Delta-G solvation = 29.728494 kcal Electronic energy + Delta-G solvation = -25804.606810 eV Core-core repulsion = 21704.381141 eV Total energy + Delta-G solvation = -4100.225669 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.043 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -45.32213 -41.40570 -39.89055 -38.81229 -37.96756 -37.26769 -37.02531 -34.90721 -33.56185 -31.68119 -29.71196 -27.37602 -26.89357 -26.80010 -25.56635 -23.71745 -23.22111 -22.20740 -21.11611 -20.54887 -19.39556 -18.65788 -18.50796 -17.99424 -17.77616 -17.22210 -16.56084 -16.38261 -16.16968 -16.02502 -15.77433 -15.51234 -14.99857 -14.66776 -14.53406 -14.31985 -14.20839 -13.94186 -13.70015 -13.62711 -13.60234 -13.41766 -12.98056 -12.97386 -12.67858 -12.60299 -12.48697 -12.34658 -12.11357 -11.92210 -11.86588 -11.80496 -10.98310 -10.72562 -10.48851 -10.19681 -9.89035 -9.66151 -5.03935 -0.63171 -0.18805 0.05895 0.47864 0.71410 1.04419 1.17982 1.19870 1.24572 1.52677 1.89885 2.14949 2.15873 2.77696 3.19907 3.25204 3.36254 3.47291 3.50020 3.66425 3.72790 3.83123 3.89283 4.02226 4.30082 4.34542 4.44980 4.51306 4.52600 4.53453 4.62795 4.66714 4.68857 4.78898 4.82075 4.88391 4.96474 5.01406 5.10016 5.46307 6.41755 6.42682 7.11150 7.20186 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.167 3.833 3 N -0.331 5.331 4 N -0.312 5.312 5 C 0.176 3.824 6 C -0.019 4.019 7 H 0.150 0.850 8 C -0.133 4.133 9 C 0.131 3.869 10 H 0.122 0.878 11 N -0.700 5.700 12 C 0.574 3.426 13 O -0.555 6.555 14 C -0.168 4.168 15 C -0.137 4.137 16 Cl 0.005 6.995 17 S 0.264 5.736 18 C -0.226 4.226 19 C -0.031 4.031 20 O -0.536 6.536 21 Si 0.704 3.296 22 C -0.069 4.069 23 C -0.118 4.118 24 O -0.232 6.232 25 H 0.118 0.882 26 H 0.113 0.887 27 H 0.116 0.884 28 H 0.088 0.912 29 H 0.092 0.908 30 H 0.414 0.586 31 H 0.148 0.852 32 H 0.389 0.611 33 H -0.270 1.270 34 H -0.255 1.255 35 H 0.177 0.823 36 H 0.096 0.904 37 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.232 0.757 1.333 2.708 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.044 4.044 3 N -0.178 5.178 4 N -0.157 5.157 5 C -0.036 4.036 6 C -0.039 4.039 7 H 0.167 0.833 8 C -0.172 4.172 9 C 0.026 3.974 10 H 0.140 0.860 11 N -0.352 5.352 12 C 0.360 3.640 13 O -0.434 6.434 14 C -0.187 4.187 15 C -0.284 4.284 16 Cl 0.034 6.966 17 S 0.530 5.470 18 C -0.343 4.343 19 C -0.143 4.143 20 O -0.344 6.344 21 Si 0.606 3.394 22 C -0.097 4.097 23 C -0.157 4.157 24 O -0.112 6.112 25 H 0.136 0.864 26 H 0.131 0.869 27 H 0.134 0.866 28 H 0.106 0.894 29 H 0.110 0.890 30 H 0.251 0.749 31 H 0.165 0.835 32 H 0.239 0.761 33 H -0.195 1.195 34 H -0.181 1.181 35 H 0.194 0.806 36 H 0.114 0.886 37 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges 0.152 2.181 0.977 2.394 hybrid contribution -2.081 -1.952 1.002 3.024 sum -1.929 0.228 1.979 2.773 Atomic orbital electron populations 1.20702 0.76975 1.07212 1.06886 1.28977 0.99351 0.78860 0.97165 1.74373 0.96527 1.27036 1.19817 1.74228 1.12681 1.10223 1.18570 1.28245 0.85390 0.91406 0.98516 1.21237 0.82672 0.99102 1.00897 0.83254 1.23567 0.92154 1.02588 0.98878 1.22358 0.85083 0.94523 0.95409 0.86048 1.45681 1.06419 1.23438 1.59621 1.17659 0.82729 0.85265 0.78305 1.90856 1.82919 1.27393 1.42267 1.20330 0.92480 0.98299 1.07590 1.25791 0.98848 0.98339 1.05446 1.98426 1.86050 1.36813 1.75326 1.83313 1.08162 1.04912 1.50647 1.24860 0.96646 1.03417 1.09399 1.24510 1.13826 0.93410 0.82539 1.86630 1.57452 1.70634 1.19692 0.94477 0.73376 0.79761 0.91778 1.21147 1.00754 0.90538 0.97276 1.23438 0.91470 1.04951 0.95832 1.84812 1.17772 1.38687 1.69895 0.86413 0.86864 0.86574 0.89367 0.88959 0.74872 0.83504 0.76063 1.19511 1.18065 0.80558 0.88577 0.87461 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.42 10.51 71.24 0.75 1.17 16 2 C 0.17 0.57 8.48 88.34 0.75 1.32 16 3 N -0.33 -3.23 12.22 -165.50 -2.02 -5.25 16 4 N -0.31 -2.82 11.83 -165.50 -1.96 -4.78 16 5 C 0.18 0.68 7.53 88.34 0.67 1.34 16 6 C -0.02 0.06 4.29 -11.02 -0.05 0.01 16 7 H 0.15 -1.14 8.14 -2.39 -0.02 -1.16 16 8 C -0.13 0.25 7.42 31.12 0.23 0.48 16 9 C 0.13 -0.35 4.24 45.52 0.19 -0.15 16 10 H 0.12 -0.12 7.46 -2.39 -0.02 -0.14 16 11 N -0.70 0.93 5.33 -443.66 -2.37 -1.44 16 12 C 0.57 2.83 7.79 86.55 0.67 3.51 16 13 O -0.56 -6.60 14.51 -4.22 -0.06 -6.66 16 14 C -0.17 -0.41 5.98 -19.84 -0.12 -0.53 16 15 C -0.14 -0.50 6.87 67.35 0.46 -0.03 16 16 Cl 0.00 0.04 27.20 -2.72 -0.07 -0.04 16 17 S 0.26 -0.59 20.19 -56.49 -1.14 -1.73 16 18 C -0.23 0.91 5.65 24.51 0.14 1.05 16 19 C -0.03 0.17 2.94 71.24 0.21 0.38 16 20 O -0.54 1.60 12.88 -148.98 -1.92 -0.32 16 21 Si 0.70 -3.59 30.92 68.60 2.12 -1.47 16 22 C -0.07 0.21 9.75 22.70 0.22 0.43 16 23 C -0.12 0.62 7.38 31.12 0.23 0.85 16 24 O -0.23 -0.94 10.87 -3.65 -0.04 -0.98 16 25 H 0.12 -1.18 8.14 -2.39 -0.02 -1.20 16 26 H 0.11 -1.19 8.14 -2.39 -0.02 -1.21 16 27 H 0.12 -0.96 8.14 -2.38 -0.02 -0.98 16 28 H 0.09 -0.17 8.14 -2.38 -0.02 -0.19 16 29 H 0.09 0.08 7.78 -2.39 -0.02 0.06 16 30 H 0.41 -2.37 7.27 -92.70 -0.67 -3.04 16 31 H 0.15 -1.22 7.96 -2.39 -0.02 -1.24 16 32 H 0.39 -3.20 8.70 -74.05 -0.64 -3.84 16 33 H -0.27 -0.46 7.11 99.48 0.71 0.25 16 34 H -0.26 0.47 7.11 99.48 0.71 1.18 16 35 H 0.18 -1.32 7.10 -2.91 -0.02 -1.34 16 36 H 0.10 -0.39 8.07 -2.39 -0.02 -0.41 16 37 H 0.11 -0.86 8.14 -2.39 -0.02 -0.88 16 Total: 0.00 -23.73 352.20 -3.22 -26.95 By element: Atomic # 1 Polarization: -14.03 SS G_CDS: -0.12 Total: -14.14 kcal Atomic # 6 Polarization: 5.49 SS G_CDS: 4.36 Total: 9.85 kcal Atomic # 7 Polarization: -5.12 SS G_CDS: -6.35 Total: -11.46 kcal Atomic # 8 Polarization: -5.94 SS G_CDS: -2.02 Total: -7.96 kcal Atomic # 14 Polarization: -3.59 SS G_CDS: 2.12 Total: -1.47 kcal Atomic # 16 Polarization: -0.59 SS G_CDS: -1.14 Total: -1.73 kcal Atomic # 17 Polarization: 0.04 SS G_CDS: -0.07 Total: -0.04 kcal Total: -23.73 -3.22 -26.95 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_13431040.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.676 kcal (2) G-P(sol) polarization free energy of solvation -23.728 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.948 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.220 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.948 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds