Wall clock time and date at job start Tue Mar 9 2021 13:09:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 N 1.30275 * 126.28448 * 2 1 4 4 N 1.28667 * 109.38171 * 179.97438 * 3 2 1 5 5 C 1.30274 * 109.38025 * 359.97438 * 4 3 2 6 6 C 1.50701 * 126.28141 * 179.97438 * 5 4 3 7 7 H 1.09000 * 112.84889 * 168.82805 * 6 5 4 8 8 C 1.53783 * 113.61380 * 300.02534 * 6 5 4 9 9 C 1.53786 * 87.08096 * 139.97989 * 8 6 5 10 10 H 1.09002 * 113.61139 * 89.19941 * 9 8 6 11 11 N 1.46493 * 113.61224 * 220.01661 * 9 8 6 12 12 C 1.34784 * 119.99864 * 204.99866 * 11 9 8 13 13 O 1.21283 * 119.99649 * 359.72839 * 12 11 9 14 14 C 1.50694 * 119.99988 * 179.72721 * 12 11 9 15 15 C 1.50698 * 109.47166 * 179.97438 * 14 12 11 16 16 C 1.34849 * 125.89593 * 274.69466 * 15 14 12 17 17 C 1.40888 * 107.42021 * 179.88421 * 16 15 14 18 18 C 1.34850 * 107.41572 * 0.37603 * 17 16 15 19 19 C 1.50704 * 125.88840 * 179.73568 * 18 17 16 20 20 O 1.42902 * 109.46824 * 120.03961 * 19 18 17 21 21 Si 1.86303 * 109.47069 * 0.04087 * 19 18 17 22 22 N 1.36333 * 108.21809 * 359.77221 * 18 17 16 23 23 C 1.53782 * 113.61262 * 37.52267 * 6 5 4 24 24 O 1.34364 * 107.43733 * 0.24241 * 5 4 3 25 25 H 1.09002 * 109.47323 * 89.97647 * 1 2 3 26 26 H 1.09001 * 109.47315 * 209.98197 * 1 2 3 27 27 H 1.09008 * 109.47105 * 329.98270 * 1 2 3 28 28 H 1.08994 * 113.61612 * 25.42878 * 8 6 5 29 29 H 1.08999 * 113.69023 * 254.53640 * 8 6 5 30 30 H 0.97000 * 120.00740 * 24.72558 * 11 9 8 31 31 H 1.08998 * 109.47224 * 299.99701 * 14 12 11 32 32 H 1.09002 * 109.47054 * 60.00213 * 14 12 11 33 33 H 1.08005 * 126.28731 * 0.02562 * 16 15 14 34 34 H 1.07997 * 126.29010 * 180.16761 * 17 16 15 35 35 H 1.08994 * 109.46808 * 240.04075 * 19 18 17 36 36 H 0.96700 * 114.00065 * 299.99539 * 20 19 18 37 37 H 1.48504 * 109.99802 * 58.68234 * 21 19 18 38 38 H 1.48503 * 110.00015 * 179.97438 * 21 19 18 39 39 H 0.97005 * 125.63494 * 179.97438 * 22 18 17 40 40 H 1.08993 * 113.61523 * 105.47284 * 23 6 5 41 41 H 1.08997 * 113.61586 * 334.56422 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 7 2.2779 1.0501 0.0000 4 7 3.5090 0.6760 0.0005 5 6 3.5653 -0.6255 0.0015 6 6 4.8175 -1.4639 0.0018 7 1 4.6210 -2.5181 0.1972 8 6 5.7214 -1.2216 -1.2186 9 6 6.9157 -1.3183 -0.2545 10 1 7.2949 -2.3325 -0.1294 11 7 7.9748 -0.3452 -0.5330 12 6 9.2420 -0.6008 -0.1515 13 8 9.5045 -1.6342 0.4267 14 6 10.3326 0.3973 -0.4434 15 6 11.6448 -0.1241 0.0831 16 6 12.1024 0.0153 1.3439 17 6 13.3591 -0.6182 1.4090 18 6 13.6255 -1.1133 0.1833 19 6 14.8683 -1.8676 -0.2139 20 8 14.5074 -3.1716 -0.6739 21 14 15.9997 -2.0195 1.2584 22 7 12.5770 -0.8132 -0.6348 23 6 5.9513 -0.8774 0.8593 24 8 2.3020 -1.0832 -0.0039 25 1 -0.3634 0.0004 -1.0277 26 1 -0.3634 -0.8901 0.5136 27 1 -0.3634 0.8899 0.5141 28 1 5.5985 -0.2344 -1.6638 29 1 5.6883 -2.0250 -1.9545 30 1 7.7649 0.4812 -0.9954 31 1 10.4074 0.5493 -1.5201 32 1 10.0975 1.3446 0.0419 33 1 11.5971 0.5181 2.1553 34 1 13.9941 -0.6906 2.2795 35 1 15.3803 -1.3297 -1.0116 36 1 14.0468 -3.7079 -0.0141 37 1 15.3021 -2.7232 2.3646 38 1 17.2288 -2.7620 0.8800 39 1 12.5060 -1.0504 -1.5727 40 1 6.1030 -1.4036 1.8017 41 1 5.8913 0.2040 0.9821 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_14644196.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:33 Heat of formation + Delta-G solvation = 36.795801 kcal Electronic energy + Delta-G solvation = -25474.119537 eV Core-core repulsion = 21552.110486 eV Total energy + Delta-G solvation = -3922.009051 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.136 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -45.33497 -42.32752 -41.11309 -39.44522 -37.84986 -37.28121 -34.90710 -33.68594 -32.92935 -31.90871 -29.90603 -29.20047 -26.90789 -26.80812 -25.22029 -23.82464 -23.41238 -21.86770 -21.34612 -21.18830 -20.72324 -19.02614 -18.60293 -18.51635 -18.08313 -17.49041 -16.88166 -16.53033 -16.39535 -16.22896 -15.61298 -15.52889 -15.26690 -14.77593 -14.57772 -14.30440 -14.14776 -14.07371 -13.86372 -13.81192 -13.65988 -13.60581 -13.51535 -13.36267 -12.99629 -12.82314 -12.64199 -12.35262 -12.18743 -11.93051 -11.89308 -11.86114 -10.97312 -10.82756 -10.49887 -10.09551 -9.78402 -8.95287 -4.87789 0.04533 1.07986 1.19111 1.23143 1.32106 1.60010 1.67720 1.86823 1.94435 2.31492 2.51720 2.77573 3.19418 3.35045 3.37421 3.47850 3.64958 3.70230 3.70890 3.81704 3.98300 4.06113 4.23123 4.29272 4.42075 4.44875 4.49152 4.51973 4.52627 4.61758 4.63894 4.66674 4.68346 4.80089 4.81429 4.86541 5.00814 5.11927 5.26900 5.30389 5.50033 5.99490 6.14323 6.38718 6.51420 6.68804 7.18801 7.24163 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.167 3.833 3 N -0.331 5.331 4 N -0.310 5.310 5 C 0.175 3.825 6 C -0.021 4.021 7 H 0.146 0.854 8 C -0.117 4.117 9 C 0.131 3.869 10 H 0.113 0.887 11 N -0.708 5.708 12 C 0.514 3.486 13 O -0.574 6.574 14 C -0.069 4.069 15 C 0.034 3.966 16 C -0.201 4.201 17 C -0.202 4.202 18 C -0.018 4.018 19 C -0.061 4.061 20 O -0.554 6.554 21 Si 0.797 3.203 22 N -0.536 5.536 23 C -0.133 4.133 24 O -0.232 6.232 25 H 0.118 0.882 26 H 0.113 0.887 27 H 0.116 0.884 28 H 0.098 0.902 29 H 0.104 0.896 30 H 0.418 0.582 31 H 0.130 0.870 32 H 0.143 0.857 33 H 0.140 0.860 34 H 0.150 0.850 35 H 0.128 0.872 36 H 0.385 0.615 37 H -0.292 1.292 38 H -0.296 1.296 39 H 0.419 0.581 40 H 0.083 0.917 41 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.627 2.070 -2.712 4.979 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.044 4.044 3 N -0.177 5.177 4 N -0.156 5.156 5 C -0.036 4.036 6 C -0.041 4.041 7 H 0.164 0.836 8 C -0.156 4.156 9 C 0.025 3.975 10 H 0.131 0.869 11 N -0.360 5.360 12 C 0.301 3.699 13 O -0.453 6.453 14 C -0.109 4.109 15 C -0.080 4.080 16 C -0.225 4.225 17 C -0.227 4.227 18 C -0.132 4.132 19 C -0.170 4.170 20 O -0.362 6.362 21 Si 0.701 3.299 22 N -0.132 5.132 23 C -0.172 4.172 24 O -0.112 6.112 25 H 0.136 0.864 26 H 0.131 0.869 27 H 0.135 0.865 28 H 0.117 0.883 29 H 0.122 0.878 30 H 0.256 0.744 31 H 0.147 0.853 32 H 0.160 0.840 33 H 0.158 0.842 34 H 0.168 0.832 35 H 0.145 0.855 36 H 0.235 0.765 37 H -0.219 1.219 38 H -0.224 1.224 39 H 0.257 0.743 40 H 0.102 0.898 41 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -2.396 2.238 -2.472 4.106 hybrid contribution -1.485 -1.866 -0.550 2.447 sum -3.881 0.373 -3.022 4.933 Atomic orbital electron populations 1.20706 0.76957 1.07228 1.06906 1.28986 0.99368 0.78849 0.97154 1.74371 0.96532 1.27014 1.19820 1.74223 1.12670 1.10145 1.18538 1.28246 0.85373 0.91431 0.98572 1.21245 0.82784 0.98975 1.01117 0.83611 1.23424 0.91545 1.04902 0.95708 1.22245 0.85505 0.94544 0.95213 0.86888 1.45840 1.06754 1.23282 1.60155 1.21028 0.84036 0.87282 0.77515 1.90750 1.83149 1.28907 1.42476 1.20265 0.86588 0.98813 1.05242 1.19906 0.92907 1.02464 0.92698 1.20846 0.97573 1.07712 0.96380 1.20902 0.99072 1.05873 0.96813 1.20897 0.93180 1.07345 0.91756 1.24990 0.97163 0.82973 1.11840 1.86532 1.79411 1.26317 1.43910 0.93437 0.74878 0.88625 0.72948 1.41871 1.15363 1.43720 1.12199 1.23561 0.92253 1.02639 0.98740 1.84815 1.17797 1.38717 1.69893 0.86388 0.86878 0.86533 0.88350 0.87756 0.74435 0.85253 0.83964 0.84236 0.83229 0.85472 0.76531 1.21907 1.22393 0.74337 0.89787 0.88759 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.44 10.51 71.23 0.75 1.19 16 2 C 0.17 0.53 8.48 88.34 0.75 1.28 16 3 N -0.33 -3.09 12.22 -165.50 -2.02 -5.11 16 4 N -0.31 -2.65 11.83 -165.50 -1.96 -4.60 16 5 C 0.18 0.62 7.53 88.34 0.67 1.29 16 6 C -0.02 0.07 4.29 -11.01 -0.05 0.03 16 7 H 0.15 -1.07 8.14 -2.39 -0.02 -1.09 16 8 C -0.12 0.71 7.38 31.12 0.23 0.94 16 9 C 0.13 -0.48 4.24 45.52 0.19 -0.29 16 10 H 0.11 -0.10 7.47 -2.39 -0.02 -0.12 16 11 N -0.71 3.32 5.36 -440.03 -2.36 0.96 16 12 C 0.51 0.30 7.82 87.65 0.69 0.98 16 13 O -0.57 -6.19 15.64 -3.04 -0.05 -6.23 16 14 C -0.07 0.34 6.24 29.10 0.18 0.52 16 15 C 0.03 0.08 5.66 41.08 0.23 0.31 16 16 C -0.20 -1.02 10.76 22.14 0.24 -0.78 16 17 C -0.20 -0.94 9.37 22.14 0.21 -0.73 16 18 C -0.02 -0.06 6.50 41.08 0.27 0.20 16 19 C -0.06 -0.08 3.08 71.24 0.22 0.14 16 20 O -0.55 -2.59 12.88 -148.98 -1.92 -4.51 16 21 Si 0.80 0.01 30.58 68.60 2.10 2.11 16 22 N -0.54 -1.17 6.07 -171.12 -1.04 -2.21 16 23 C -0.13 0.32 7.42 31.12 0.23 0.55 16 24 O -0.23 -0.90 10.87 -3.69 -0.04 -0.94 16 25 H 0.12 -1.22 8.14 -2.39 -0.02 -1.24 16 26 H 0.11 -1.22 8.14 -2.39 -0.02 -1.24 16 27 H 0.12 -1.00 8.14 -2.38 -0.02 -1.02 16 28 H 0.10 -0.53 8.07 -2.39 -0.02 -0.54 16 29 H 0.10 -0.89 8.14 -2.39 -0.02 -0.91 16 30 H 0.42 -4.19 8.73 -92.71 -0.81 -5.00 16 31 H 0.13 -1.37 8.14 -2.39 -0.02 -1.39 16 32 H 0.14 -1.35 8.14 -2.39 -0.02 -1.37 16 33 H 0.14 0.45 8.06 -2.91 -0.02 0.43 16 34 H 0.15 0.22 6.22 -2.91 -0.02 0.20 16 35 H 0.13 -0.20 7.96 -2.39 -0.02 -0.22 16 36 H 0.39 0.40 8.70 -74.06 -0.64 -0.25 16 37 H -0.29 -1.68 7.11 99.48 0.71 -0.97 16 38 H -0.30 -1.87 7.11 99.48 0.71 -1.16 16 39 H 0.42 -0.55 8.96 -92.70 -0.83 -1.38 16 40 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 41 H 0.09 0.00 7.78 -2.39 -0.02 -0.02 16 Total: 0.00 -28.74 356.04 -3.63 -32.36 By element: Atomic # 1 Polarization: -16.32 SS G_CDS: -1.14 Total: -17.46 kcal Atomic # 6 Polarization: 0.82 SS G_CDS: 4.80 Total: 5.63 kcal Atomic # 7 Polarization: -3.58 SS G_CDS: -7.38 Total: -10.96 kcal Atomic # 8 Polarization: -9.67 SS G_CDS: -2.01 Total: -11.67 kcal Atomic # 14 Polarization: 0.01 SS G_CDS: 2.10 Total: 2.11 kcal Total: -28.74 -3.63 -32.36 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_14644196.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.158 kcal (2) G-P(sol) polarization free energy of solvation -28.736 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.422 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.626 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.362 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.796 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds