Wall clock time and date at job start Tue Mar 9 2021 13:09:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.30281 * 126.28248 * 2 1 4 4 N 1.28664 * 109.38168 * 179.97438 * 3 2 1 5 5 C 1.30279 * 109.38034 * 359.97438 * 4 3 2 6 6 C 1.50698 * 126.28023 * 179.97438 * 5 4 3 7 7 H 1.09006 * 112.85095 * 168.82527 * 6 5 4 8 8 C 1.53774 * 113.61623 * 300.02450 * 6 5 4 9 9 C 1.53784 * 87.08236 * 140.06673 * 8 6 5 10 10 H 1.09003 * 113.61425 * 89.20218 * 9 8 6 11 11 N 1.46499 * 113.61263 * 220.01818 * 9 8 6 12 12 C 1.34776 * 119.99941 * 204.99512 * 11 9 8 13 13 O 1.21283 * 120.00254 * 0.02562 * 12 11 9 14 14 C 1.50699 * 120.00405 * 180.02562 * 12 11 9 15 15 O 1.42894 * 109.47583 * 180.02562 * 14 12 11 16 16 C 1.35900 * 117.00370 * 179.97438 * 15 14 12 17 17 C 1.38708 * 120.05751 * 180.02562 * 16 15 14 18 18 C 1.50697 * 120.02761 * 0.02562 * 17 16 15 19 19 O 1.42897 * 109.47267 * 75.00104 * 18 17 16 20 20 Si 1.86304 * 109.46890 * 195.00115 * 18 17 16 21 21 C 1.38171 * 119.94045 * 180.02562 * 17 16 15 22 22 C 1.38240 * 120.06065 * 359.97438 * 21 17 16 23 23 C 1.38295 * 120.10794 * 0.02562 * 22 21 17 24 24 C 1.38119 * 120.05704 * 0.02562 * 23 22 21 25 25 C 1.53780 * 87.08153 * 334.56790 * 9 8 6 26 26 O 1.34361 * 107.43757 * 0.24028 * 5 4 3 27 27 H 1.09005 * 109.46620 * 90.02648 * 1 2 3 28 28 H 1.08996 * 109.47263 * 210.02554 * 1 2 3 29 29 H 1.08999 * 109.47249 * 330.03337 * 1 2 3 30 30 H 1.08997 * 113.61833 * 25.51724 * 8 6 5 31 31 H 1.09004 * 113.61930 * 254.61344 * 8 6 5 32 32 H 0.97002 * 120.00478 * 25.00336 * 11 9 8 33 33 H 1.09001 * 109.47049 * 59.99786 * 14 12 11 34 34 H 1.08998 * 109.46949 * 300.00530 * 14 12 11 35 35 H 1.09000 * 109.47025 * 314.99193 * 18 17 16 36 36 H 0.96690 * 114.00392 * 59.99967 * 19 18 17 37 37 H 1.48499 * 110.00120 * 58.67623 * 20 18 17 38 38 H 1.48496 * 109.99774 * 180.02562 * 20 18 17 39 39 H 1.08005 * 119.97011 * 180.02562 * 21 17 16 40 40 H 1.07995 * 119.94494 * 180.27435 * 22 21 17 41 41 H 1.07997 * 119.96986 * 179.97438 * 23 22 21 42 42 H 1.08001 * 120.02616 * 179.97438 * 24 23 22 43 43 H 1.09001 * 113.61851 * 139.97887 * 25 9 8 44 44 H 1.08998 * 113.61284 * 270.88792 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2780 1.0502 0.0000 4 7 3.5090 0.6762 0.0005 5 6 3.5654 -0.6254 0.0015 6 6 4.8177 -1.4638 0.0018 7 1 4.6212 -2.5180 0.1973 8 6 5.7215 -1.2215 -1.2185 9 6 6.9159 -1.3203 -0.2548 10 1 7.2940 -2.3351 -0.1307 11 7 7.9761 -0.3483 -0.5327 12 6 9.2430 -0.6056 -0.1517 13 8 9.5055 -1.6421 0.4208 14 6 10.3336 0.3946 -0.4370 15 8 11.5778 -0.1028 0.0593 16 6 12.6718 0.6836 -0.1187 17 6 13.9120 0.2623 0.3379 18 6 14.0479 -1.0685 1.0317 19 8 13.9759 -2.1189 0.0656 20 14 15.6883 -1.1454 1.9115 21 6 15.0226 1.0640 0.1561 22 6 14.8986 2.2847 -0.4807 23 6 13.6632 2.7070 -0.9368 24 6 12.5498 1.9098 -0.7567 25 6 5.9524 -0.8793 0.8596 26 8 2.3022 -1.0831 -0.0039 27 1 -0.3633 -0.0005 -1.0277 28 1 -0.3633 -0.8897 0.5142 29 1 -0.3634 0.8903 0.5133 30 1 5.5997 -0.2337 -1.6629 31 1 5.6865 -2.0250 -1.9543 32 1 7.7663 0.4807 -0.9907 33 1 10.0978 1.3390 0.0535 34 1 10.4090 0.5528 -1.5128 35 1 13.2416 -1.1848 1.7558 36 1 14.6649 -2.0785 -0.6115 37 1 15.7887 -0.0388 2.8967 38 1 15.8349 -2.4534 2.5992 39 1 15.9885 0.7363 0.5111 40 1 15.7687 2.9079 -0.6257 41 1 13.5689 3.6612 -1.4337 42 1 11.5852 2.2402 -1.1127 43 1 6.1036 -1.4065 1.8016 44 1 5.8935 0.2020 0.9833 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_2989392.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:45 Heat of formation + Delta-G solvation = -0.269111 kcal Electronic energy + Delta-G solvation = -28972.944930 eV Core-core repulsion = 24667.846202 eV Total energy + Delta-G solvation = -4305.098728 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.141 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -45.24339 -41.67415 -41.06914 -39.62688 -38.32957 -37.35370 -37.16185 -34.99370 -33.67771 -32.71830 -31.34063 -30.10842 -29.15844 -27.06393 -26.67953 -26.58340 -24.11291 -23.59477 -23.10707 -22.58694 -21.68398 -20.97680 -19.48524 -18.63867 -18.42420 -18.22524 -17.90325 -17.47173 -17.34973 -16.87669 -16.58602 -16.53038 -15.91542 -15.66080 -15.59309 -15.43421 -15.09725 -14.94457 -14.65033 -14.49306 -14.07555 -13.90384 -13.85956 -13.79989 -13.73136 -13.46457 -13.33705 -13.01439 -12.88501 -12.80448 -12.45682 -12.36849 -12.19244 -12.05834 -11.95626 -11.86732 -11.66586 -10.89043 -10.44804 -10.23490 -10.22193 -9.99779 -9.21537 -4.95941 0.09210 0.20705 0.39635 1.13830 1.33855 1.40022 1.45973 1.47986 1.73473 2.08586 2.52206 2.67548 2.72440 3.06230 3.20173 3.36867 3.48551 3.51479 3.56819 3.60480 3.76601 3.79027 3.87669 3.90967 3.94501 4.02306 4.18607 4.24587 4.25412 4.31221 4.33338 4.34643 4.46199 4.48866 4.50931 4.57793 4.61959 4.68356 4.73680 4.76202 4.95766 4.96248 5.24825 5.30503 5.31971 5.46941 5.67761 6.21276 6.36317 6.78365 7.06490 7.29300 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.163 3.837 3 N -0.288 5.288 4 N -0.282 5.282 5 C 0.174 3.826 6 C -0.022 4.022 7 H 0.129 0.871 8 C -0.130 4.130 9 C 0.131 3.869 10 H 0.127 0.873 11 N -0.717 5.717 12 C 0.518 3.482 13 O -0.507 6.507 14 C 0.038 3.962 15 O -0.278 6.278 16 C 0.151 3.849 17 C -0.149 4.149 18 C -0.057 4.057 19 O -0.532 6.532 20 Si 0.682 3.318 21 C -0.075 4.075 22 C -0.151 4.151 23 C -0.073 4.073 24 C -0.212 4.212 25 C -0.136 4.136 26 O -0.225 6.225 27 H 0.101 0.899 28 H 0.094 0.906 29 H 0.108 0.892 30 H 0.100 0.900 31 H 0.092 0.908 32 H 0.405 0.595 33 H 0.094 0.906 34 H 0.095 0.905 35 H 0.114 0.886 36 H 0.373 0.627 37 H -0.257 1.257 38 H -0.254 1.254 39 H 0.136 0.864 40 H 0.130 0.870 41 H 0.129 0.871 42 H 0.130 0.870 43 H 0.088 0.912 44 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.244 2.164 -4.297 4.969 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.047 4.047 3 N -0.136 5.136 4 N -0.129 5.129 5 C -0.037 4.037 6 C -0.042 4.042 7 H 0.146 0.854 8 C -0.169 4.169 9 C 0.026 3.974 10 H 0.144 0.856 11 N -0.370 5.370 12 C 0.303 3.697 13 O -0.380 6.380 14 C -0.041 4.041 15 O -0.190 6.190 16 C 0.105 3.895 17 C -0.151 4.151 18 C -0.167 4.167 19 O -0.336 6.336 20 Si 0.583 3.417 21 C -0.092 4.092 22 C -0.170 4.170 23 C -0.091 4.091 24 C -0.231 4.231 25 C -0.175 4.175 26 O -0.104 6.104 27 H 0.119 0.881 28 H 0.113 0.887 29 H 0.127 0.873 30 H 0.118 0.882 31 H 0.110 0.890 32 H 0.241 0.759 33 H 0.112 0.888 34 H 0.113 0.887 35 H 0.131 0.869 36 H 0.219 0.781 37 H -0.182 1.182 38 H -0.179 1.179 39 H 0.153 0.847 40 H 0.148 0.852 41 H 0.147 0.853 42 H 0.147 0.853 43 H 0.106 0.894 44 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -0.787 2.175 -2.630 3.502 hybrid contribution -1.472 -0.257 -0.358 1.537 sum -2.259 1.918 -2.989 4.208 Atomic orbital electron populations 1.20410 0.79959 1.05973 1.05488 1.28113 0.97966 0.79494 0.99143 1.74442 0.95939 1.25515 1.17679 1.74308 1.12419 1.08983 1.17158 1.27674 0.84694 0.91601 0.99750 1.20992 0.84087 0.98604 1.00516 0.85350 1.23505 0.92718 1.04569 0.96072 1.22375 0.85023 0.94882 0.95114 0.85554 1.45722 1.06912 1.23048 1.61343 1.20060 0.83095 0.87459 0.79097 1.90803 1.81995 1.25912 1.39272 1.22475 0.83454 0.97037 1.01101 1.86231 1.13629 1.43511 1.75618 1.18798 0.86575 0.89437 0.94692 1.19732 0.91130 0.99004 1.05187 1.24929 1.11501 0.84678 0.95640 1.86598 1.56839 1.47762 1.42410 0.95239 0.81807 0.80621 0.83991 1.20861 0.96754 0.94126 0.97505 1.21079 0.98037 0.96851 1.00992 1.21027 0.92031 0.98980 0.97050 1.21305 1.00531 0.95333 1.05903 1.23638 0.91858 1.03347 0.98653 1.84793 1.17556 1.38449 1.69599 0.88089 0.88702 0.87320 0.88160 0.88975 0.75947 0.88796 0.88693 0.86897 0.78067 1.18195 1.17889 0.84696 0.85180 0.85330 0.85254 0.89366 0.87771 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.19 10.51 36.01 0.38 0.57 16 2 C 0.16 0.25 8.48 -12.94 -0.11 0.14 16 3 N -0.29 -1.22 12.22 32.55 0.40 -0.82 16 4 N -0.28 -1.07 11.84 32.55 0.39 -0.69 16 5 C 0.17 0.28 7.54 -12.94 -0.10 0.18 16 6 C -0.02 0.04 4.29 -90.96 -0.39 -0.35 16 7 H 0.13 -0.43 8.14 -51.93 -0.42 -0.86 16 8 C -0.13 0.36 7.38 -25.92 -0.19 0.17 16 9 C 0.13 -0.22 4.24 -67.12 -0.28 -0.50 16 10 H 0.13 -0.07 7.46 -51.93 -0.39 -0.46 16 11 N -0.72 1.25 5.35 -53.02 -0.28 0.97 16 12 C 0.52 0.78 7.91 -10.99 -0.09 0.69 16 13 O -0.51 -3.28 16.10 -14.36 -0.23 -3.51 16 14 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 15 O -0.28 -0.99 9.00 -39.34 -0.35 -1.35 16 16 C 0.15 0.35 6.66 -39.22 -0.26 0.08 16 17 C -0.15 -0.27 5.27 -104.47 -0.55 -0.82 16 18 C -0.06 -0.14 2.38 36.00 0.09 -0.05 16 19 O -0.53 -1.65 12.88 -35.23 -0.45 -2.10 16 20 Si 0.68 0.29 29.92 -169.99 -5.09 -4.80 16 21 C -0.07 0.02 8.66 -39.61 -0.34 -0.33 16 22 C -0.15 0.12 10.04 -39.56 -0.40 -0.28 16 23 C -0.07 0.05 10.04 -39.60 -0.40 -0.35 16 24 C -0.21 -0.01 9.04 -39.43 -0.36 -0.37 16 25 C -0.14 0.18 7.42 -25.92 -0.19 -0.01 16 26 O -0.22 -0.43 10.87 5.38 0.06 -0.37 16 27 H 0.10 -0.45 8.14 -51.93 -0.42 -0.88 16 28 H 0.09 -0.44 8.14 -51.93 -0.42 -0.86 16 29 H 0.11 -0.42 8.14 -51.93 -0.42 -0.85 16 30 H 0.10 -0.25 8.07 -51.93 -0.42 -0.67 16 31 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 32 H 0.41 -1.81 8.73 -40.82 -0.36 -2.17 16 33 H 0.09 -0.27 7.66 -51.93 -0.40 -0.66 16 34 H 0.10 -0.28 7.66 -51.93 -0.40 -0.68 16 35 H 0.11 0.50 7.83 -51.93 -0.41 0.10 16 36 H 0.37 -0.54 8.70 45.56 0.40 -0.14 16 37 H -0.26 -0.68 7.11 56.52 0.40 -0.28 16 38 H -0.25 -0.96 7.11 56.52 0.40 -0.56 16 39 H 0.14 -0.37 5.13 -52.48 -0.27 -0.63 16 40 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 41 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 42 H 0.13 -0.31 6.30 -52.49 -0.33 -0.64 16 43 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 44 H 0.10 -0.04 7.79 -51.93 -0.40 -0.45 16 LS Contribution 377.77 15.07 5.69 5.69 Total: 0.00 -13.16 377.77 -8.43 -21.60 By element: Atomic # 1 Polarization: -8.00 SS G_CDS: -5.55 Total: -13.55 kcal Atomic # 6 Polarization: 1.95 SS G_CDS: -3.01 Total: -1.06 kcal Atomic # 7 Polarization: -1.05 SS G_CDS: 0.50 Total: -0.55 kcal Atomic # 8 Polarization: -6.35 SS G_CDS: -0.98 Total: -7.33 kcal Atomic # 14 Polarization: 0.29 SS G_CDS: -5.09 Total: -4.80 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -13.16 -8.43 -21.60 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_2989392.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.327 kcal (2) G-P(sol) polarization free energy of solvation -13.163 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.164 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.433 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.596 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.269 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds