Wall clock time and date at job start Tue Mar 9 2021 13:09:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.30274 * 126.28368 * 2 1 4 4 N 1.28668 * 109.38175 * 179.73686 * 3 2 1 5 5 C 1.30271 * 109.38063 * 359.97438 * 4 3 2 6 6 C 1.50703 * 126.28119 * 180.02562 * 5 4 3 7 7 H 1.09002 * 112.84984 * 191.17468 * 6 5 4 8 8 C 1.53781 * 113.61468 * 322.48155 * 6 5 4 9 9 C 1.53782 * 87.08070 * 139.98059 * 8 6 5 10 10 H 1.09002 * 113.61505 * 89.11282 * 9 8 6 11 11 N 1.46500 * 113.69113 * 220.00854 * 9 8 6 12 12 C 1.34777 * 119.99996 * 252.53748 * 11 9 8 13 13 O 1.21286 * 119.99835 * 359.97438 * 12 11 9 14 14 C 1.50700 * 119.99699 * 179.97438 * 12 11 9 15 15 C 1.53003 * 109.46626 * 179.97438 * 14 12 11 16 16 O 1.42903 * 109.46789 * 180.02562 * 15 14 12 17 17 C 1.35905 * 116.99863 * 179.97438 * 16 15 14 18 18 C 1.38736 * 120.05409 * 359.72864 * 17 16 15 19 19 C 1.38143 * 119.94022 * 179.74186 * 18 17 16 20 20 C 1.38263 * 120.05792 * 0.50801 * 19 18 17 21 21 C 1.50702 * 119.94678 * 179.74271 * 20 19 18 22 22 O 1.42895 * 109.47345 * 245.02191 * 21 20 19 23 23 Si 1.86296 * 109.46933 * 5.02668 * 21 20 19 24 24 C 1.38265 * 120.10869 * 359.76612 * 20 19 18 25 25 C 1.38142 * 120.05973 * 359.97438 * 24 20 19 26 26 C 1.53774 * 113.61386 * 59.97997 * 6 5 4 27 27 O 1.34360 * 107.43788 * 0.02562 * 5 4 3 28 28 H 1.09005 * 109.46860 * 90.02915 * 1 2 3 29 29 H 1.08999 * 109.46793 * 210.02575 * 1 2 3 30 30 H 1.08999 * 109.47084 * 330.02772 * 1 2 3 31 31 H 1.09006 * 113.61238 * 254.52934 * 8 6 5 32 32 H 1.09003 * 113.61139 * 25.42828 * 8 6 5 33 33 H 0.97003 * 119.99754 * 72.52979 * 11 9 8 34 34 H 1.08992 * 109.47373 * 299.99653 * 14 12 11 35 35 H 1.08997 * 109.47399 * 60.00388 * 14 12 11 36 36 H 1.09003 * 109.47186 * 299.99513 * 15 14 12 37 37 H 1.08998 * 109.47305 * 59.99998 * 15 14 12 38 38 H 1.08003 * 120.02500 * 359.97438 * 18 17 16 39 39 H 1.07999 * 119.97206 * 180.23129 * 19 18 17 40 40 H 1.08998 * 109.46853 * 125.02041 * 21 20 19 41 41 H 0.96701 * 113.99948 * 60.00383 * 22 21 20 42 42 H 1.48494 * 110.00143 * 179.97438 * 23 21 20 43 43 H 1.48502 * 109.99706 * 301.31580 * 23 21 20 44 44 H 1.08011 * 119.97064 * 179.97438 * 24 20 19 45 45 H 1.07999 * 120.03068 * 179.97438 * 25 24 20 46 46 H 1.09005 * 113.61524 * 334.56639 * 26 6 5 47 47 H 1.09005 * 113.61694 * 105.46984 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2780 1.0501 0.0000 4 7 3.5091 0.6761 0.0056 5 6 3.5654 -0.6254 0.0099 6 6 4.8177 -1.4638 0.0175 7 1 4.6219 -2.5188 -0.1746 8 6 5.9547 -0.8805 -0.8379 9 6 6.9147 -1.3172 0.2813 10 1 7.2935 -2.3321 0.1605 11 7 7.9737 -0.3443 0.5614 12 6 9.2421 -0.6020 0.1856 13 8 9.5069 -1.6396 -0.3840 14 6 10.3313 0.3990 0.4732 15 6 11.6656 -0.1343 -0.0523 16 8 12.6986 0.8147 0.2209 17 6 13.9553 0.4922 -0.1836 18 6 14.1904 -0.7152 -0.8251 19 6 15.4679 -1.0382 -1.2400 20 6 16.5135 -0.1641 -1.0071 21 6 17.9070 -0.5216 -1.4557 22 8 18.7499 -0.6785 -0.3125 23 14 17.8600 -2.1170 -2.4164 24 6 16.2827 1.0374 -0.3629 25 6 15.0062 1.3675 0.0493 26 6 5.7168 -1.2169 1.2403 27 8 2.3022 -1.0831 0.0062 28 1 -0.3633 -0.0005 -1.0277 29 1 -0.3633 -0.8898 0.5142 30 1 -0.3633 0.8902 0.5134 31 1 6.1100 -1.4104 -1.7777 32 1 5.8951 0.2004 -0.9650 33 1 7.7619 0.4853 1.0171 34 1 10.0971 1.3424 -0.0199 35 1 10.4028 0.5592 1.5489 36 1 11.8996 -1.0776 0.4412 37 1 11.5945 -0.2948 -1.1280 38 1 13.3747 -1.4003 -1.0033 39 1 15.6508 -1.9764 -1.7428 40 1 18.2995 0.2731 -2.0901 41 1 18.4603 -1.3706 0.2977 42 1 19.2282 -2.4803 -2.8650 43 1 17.2970 -3.2015 -1.5725 44 1 17.1012 1.7184 -0.1817 45 1 14.8265 2.3059 0.5528 46 1 5.5921 -0.2279 1.6814 47 1 5.6800 -2.0183 1.9783 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_4549602.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:50 Heat of formation + Delta-G solvation = -16.597176 kcal Electronic energy + Delta-G solvation = -29904.288461 eV Core-core repulsion = 25442.944076 eV Total energy + Delta-G solvation = -4461.344385 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -45.32932 -41.48062 -41.10653 -39.69043 -39.09080 -37.29580 -37.27463 -34.95223 -33.71735 -33.17300 -32.02415 -31.43029 -29.65040 -27.20730 -26.89405 -26.39711 -25.49608 -23.94317 -23.58940 -23.06422 -22.19817 -21.51918 -20.77933 -19.50156 -18.63857 -18.52396 -18.40911 -17.75013 -17.47560 -17.40662 -17.00658 -16.52097 -16.31688 -16.15030 -15.94530 -15.77147 -15.52249 -15.36565 -14.74516 -14.55978 -14.38553 -14.33689 -14.26700 -14.07229 -13.69133 -13.62428 -13.60543 -13.49322 -13.41913 -12.99002 -12.90834 -12.84068 -12.63281 -12.33843 -12.27242 -12.06266 -11.92931 -11.88347 -11.77009 -11.57904 -11.03276 -10.58928 -10.49444 -10.13224 -10.03478 -9.22203 -4.92915 0.05286 0.28317 0.31160 1.17921 1.23814 1.31849 1.50978 1.58316 1.73832 1.94012 2.48946 2.65308 2.78582 3.20306 3.35979 3.44536 3.48383 3.57583 3.65627 3.71892 3.72522 3.83375 3.88862 3.92766 4.00119 4.04556 4.26603 4.29755 4.34633 4.41079 4.46609 4.50232 4.52310 4.56849 4.62930 4.66168 4.68445 4.69440 4.70438 4.79765 4.81863 4.87948 4.98091 5.01292 5.11397 5.18577 5.29246 5.47105 5.49646 5.72621 6.32865 6.45306 6.49259 7.13745 7.19438 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.168 3.832 3 N -0.332 5.332 4 N -0.312 5.312 5 C 0.175 3.825 6 C -0.021 4.021 7 H 0.149 0.851 8 C -0.133 4.133 9 C 0.130 3.870 10 H 0.121 0.879 11 N -0.706 5.706 12 C 0.524 3.476 13 O -0.578 6.578 14 C -0.135 4.135 15 C 0.072 3.928 16 O -0.322 6.322 17 C 0.124 3.876 18 C -0.209 4.209 19 C -0.081 4.081 20 C -0.158 4.158 21 C -0.075 4.075 22 O -0.549 6.549 23 Si 0.760 3.240 24 C -0.059 4.059 25 C -0.159 4.159 26 C -0.118 4.118 27 O -0.232 6.232 28 H 0.117 0.883 29 H 0.114 0.886 30 H 0.117 0.883 31 H 0.087 0.913 32 H 0.092 0.908 33 H 0.418 0.582 34 H 0.125 0.875 35 H 0.126 0.874 36 H 0.066 0.934 37 H 0.068 0.932 38 H 0.141 0.859 39 H 0.142 0.858 40 H 0.126 0.874 41 H 0.385 0.615 42 H -0.302 1.302 43 H -0.285 1.285 44 H 0.140 0.860 45 H 0.141 0.859 46 H 0.096 0.904 47 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.269 -1.396 0.815 6.475 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.043 4.043 3 N -0.179 5.179 4 N -0.157 5.157 5 C -0.036 4.036 6 C -0.041 4.041 7 H 0.166 0.834 8 C -0.173 4.173 9 C 0.025 3.975 10 H 0.138 0.862 11 N -0.358 5.358 12 C 0.312 3.688 13 O -0.458 6.458 14 C -0.175 4.175 15 C -0.003 4.003 16 O -0.236 6.236 17 C 0.078 3.922 18 C -0.228 4.228 19 C -0.099 4.099 20 C -0.159 4.159 21 C -0.184 4.184 22 O -0.357 6.357 23 Si 0.666 3.334 24 C -0.077 4.077 25 C -0.178 4.178 26 C -0.157 4.157 27 O -0.112 6.112 28 H 0.135 0.865 29 H 0.132 0.868 30 H 0.135 0.865 31 H 0.106 0.894 32 H 0.110 0.890 33 H 0.256 0.744 34 H 0.143 0.857 35 H 0.144 0.856 36 H 0.085 0.915 37 H 0.086 0.914 38 H 0.158 0.842 39 H 0.159 0.841 40 H 0.143 0.857 41 H 0.234 0.766 42 H -0.230 1.230 43 H -0.212 1.212 44 H 0.158 0.842 45 H 0.159 0.841 46 H 0.114 0.886 47 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -5.216 -1.029 0.185 5.320 hybrid contribution -0.410 -1.016 1.219 1.639 sum -5.626 -2.045 1.404 6.148 Atomic orbital electron populations 1.20709 0.76971 1.07281 1.06863 1.28980 0.99354 0.78846 0.97117 1.74371 0.96562 1.27067 1.19865 1.74222 1.12671 1.10233 1.18595 1.28282 0.85429 0.91425 0.98509 1.21261 0.82696 0.99066 1.01066 0.83358 1.23573 0.92223 1.02624 0.98852 1.22323 0.85352 0.94684 0.95187 0.86157 1.45824 1.06672 1.23144 1.60138 1.20595 0.84078 0.86877 0.77282 1.90737 1.83196 1.28579 1.43292 1.21453 0.90297 0.99592 1.06135 1.22473 0.85358 0.91199 1.01269 1.85963 1.14742 1.46239 1.76667 1.19189 0.84547 0.93854 0.94564 1.21415 0.99018 0.97593 1.04767 1.21025 0.91957 0.99178 0.97715 1.20240 0.95800 0.96263 1.03598 1.25103 0.88174 1.12528 0.92609 1.86565 1.53147 1.60374 1.35589 0.94104 0.80324 0.73791 0.85197 1.20990 0.95956 0.95918 0.94809 1.20675 0.91005 1.00904 1.05189 1.23435 0.91605 1.04881 0.95805 1.84813 1.17791 1.38684 1.69895 0.86521 0.86766 0.86508 0.89406 0.88967 0.74427 0.85709 0.85592 0.91541 0.91366 0.84170 0.84051 0.85663 0.76578 1.23017 1.21155 0.84185 0.84096 0.88558 0.87565 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.46 10.51 71.24 0.75 1.21 16 2 C 0.17 0.47 8.48 88.34 0.75 1.22 16 3 N -0.33 -3.04 12.22 -165.50 -2.02 -5.06 16 4 N -0.31 -2.57 11.83 -165.51 -1.96 -4.53 16 5 C 0.18 0.52 7.53 88.34 0.67 1.18 16 6 C -0.02 0.09 4.29 -11.01 -0.05 0.05 16 7 H 0.15 -1.30 8.14 -2.39 -0.02 -1.32 16 8 C -0.13 0.50 7.42 31.12 0.23 0.73 16 9 C 0.13 -0.67 4.24 45.52 0.19 -0.47 16 10 H 0.12 -0.41 7.46 -2.39 -0.02 -0.43 16 11 N -0.71 3.88 5.36 -440.03 -2.36 1.52 16 12 C 0.52 -0.57 7.83 87.66 0.69 0.12 16 13 O -0.58 -4.06 15.58 -3.05 -0.05 -4.11 16 14 C -0.14 0.68 6.07 29.85 0.18 0.86 16 15 C 0.07 0.00 4.03 71.98 0.29 0.29 16 16 O -0.32 -0.98 10.14 -92.49 -0.94 -1.91 16 17 C 0.12 0.50 6.69 22.51 0.15 0.65 16 18 C -0.21 -0.55 9.04 22.37 0.20 -0.34 16 19 C -0.08 -0.10 8.66 22.25 0.19 0.09 16 20 C -0.16 -0.24 5.35 -19.85 -0.11 -0.35 16 21 C -0.07 -0.03 2.80 71.24 0.20 0.17 16 22 O -0.55 -1.91 12.83 -148.98 -1.91 -3.82 16 23 Si 0.76 -0.47 29.88 68.60 2.05 1.58 16 24 C -0.06 -0.12 9.68 22.25 0.22 0.09 16 25 C -0.16 -0.47 9.99 22.36 0.22 -0.25 16 26 C -0.12 0.83 7.38 31.12 0.23 1.06 16 27 O -0.23 -0.77 10.87 -3.66 -0.04 -0.81 16 28 H 0.12 -1.20 8.14 -2.38 -0.02 -1.22 16 29 H 0.11 -1.29 8.14 -2.39 -0.02 -1.31 16 30 H 0.12 -1.05 8.14 -2.39 -0.02 -1.07 16 31 H 0.09 -0.33 8.14 -2.38 -0.02 -0.35 16 32 H 0.09 -0.08 7.78 -2.39 -0.02 -0.10 16 33 H 0.42 -4.18 8.73 -92.71 -0.81 -4.99 16 34 H 0.12 -0.99 8.14 -2.39 -0.02 -1.01 16 35 H 0.13 -1.06 8.14 -2.39 -0.02 -1.08 16 36 H 0.07 0.07 7.61 -2.39 -0.02 0.05 16 37 H 0.07 0.07 7.63 -2.39 -0.02 0.05 16 38 H 0.14 0.09 6.30 -2.91 -0.02 0.07 16 39 H 0.14 -0.31 4.83 -2.91 -0.01 -0.32 16 40 H 0.13 -0.18 7.96 -2.39 -0.02 -0.20 16 41 H 0.39 -0.70 8.70 -74.06 -0.64 -1.34 16 42 H -0.30 -2.08 7.11 99.48 0.71 -1.38 16 43 H -0.28 -0.92 7.00 99.48 0.70 -0.23 16 44 H 0.14 0.01 8.06 -2.90 -0.02 -0.02 16 45 H 0.14 0.08 8.06 -2.91 -0.02 0.06 16 46 H 0.10 -0.55 8.07 -2.38 -0.02 -0.57 16 47 H 0.11 -1.02 8.14 -2.38 -0.02 -1.04 16 Total: 0.00 -25.96 399.14 -2.62 -28.58 By element: Atomic # 1 Polarization: -17.33 SS G_CDS: -0.40 Total: -17.72 kcal Atomic # 6 Polarization: 1.28 SS G_CDS: 5.00 Total: 6.29 kcal Atomic # 7 Polarization: -1.73 SS G_CDS: -6.34 Total: -8.07 kcal Atomic # 8 Polarization: -7.72 SS G_CDS: -2.94 Total: -10.65 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: 2.05 Total: 1.58 kcal Total: -25.96 -2.62 -28.58 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_4549602.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.978 kcal (2) G-P(sol) polarization free energy of solvation -25.959 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.980 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.617 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.576 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds