Wall clock time and date at job start Tue Mar 9 2021 13:10:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35975 * 117.00286 * 2 1 4 4 C 1.38684 * 120.00523 * 179.97438 * 3 2 1 5 5 C 1.38148 * 120.00153 * 180.02562 * 4 3 2 6 6 C 1.50697 * 120.00033 * 180.02562 * 5 4 3 7 7 O 1.42900 * 109.47036 * 254.98085 * 6 5 4 8 8 Si 1.86302 * 109.46995 * 14.97361 * 6 5 4 9 9 C 1.38674 * 120.00137 * 0.02562 * 5 4 3 10 10 O 1.35984 * 119.99945 * 180.02562 * 9 5 4 11 11 C 1.42908 * 116.99896 * 179.97438 * 10 9 5 12 12 C 1.50698 * 109.46887 * 179.97438 * 11 10 9 13 13 O 1.21283 * 120.00472 * 0.02562 * 12 11 10 14 14 N 1.34777 * 119.99538 * 180.02562 * 12 11 10 15 15 C 1.46499 * 119.99665 * 179.72653 * 14 12 11 16 16 H 1.08998 * 112.85361 * 336.47110 * 15 14 12 17 17 C 1.53778 * 113.61557 * 107.77998 * 15 14 12 18 18 C 1.53785 * 87.08457 * 139.98112 * 17 15 14 19 19 H 1.08997 * 113.61414 * 89.11579 * 18 17 15 20 20 C 1.50702 * 113.69224 * 220.01245 * 18 17 15 21 21 N 1.30273 * 126.28104 * 37.56027 * 20 18 17 22 22 N 1.28672 * 109.37597 * 179.97438 * 21 20 18 23 23 C 1.30272 * 109.38354 * 359.97438 * 22 21 20 24 24 C 1.50700 * 126.28152 * 180.02562 * 23 22 21 25 25 O 1.34365 * 107.43613 * 359.76669 * 23 22 21 26 26 C 1.53786 * 113.61394 * 205.27970 * 15 14 12 27 27 C 1.38718 * 119.99956 * 0.27231 * 9 5 4 28 28 C 1.38110 * 119.99816 * 359.44979 * 27 9 5 29 29 H 1.08996 * 109.47513 * 300.00023 * 1 2 3 30 30 H 1.08997 * 109.46803 * 60.00470 * 1 2 3 31 31 H 1.09007 * 109.46843 * 180.02562 * 1 2 3 32 32 H 1.08001 * 119.99174 * 0.04868 * 4 3 2 33 33 H 1.08996 * 109.47714 * 134.97777 * 6 5 4 34 34 H 0.96701 * 113.99952 * 299.99473 * 7 6 5 35 35 H 1.48505 * 109.99873 * 60.00635 * 8 6 5 36 36 H 1.48502 * 109.99925 * 181.32117 * 8 6 5 37 37 H 1.09003 * 109.46467 * 60.00362 * 11 10 9 38 38 H 1.08993 * 109.47113 * 300.00627 * 11 10 9 39 39 H 0.97001 * 120.00485 * 0.02562 * 14 12 11 40 40 H 1.08997 * 113.61721 * 254.52733 * 17 15 14 41 41 H 1.09004 * 113.61436 * 25.43627 * 17 15 14 42 42 H 1.08999 * 109.46551 * 90.03138 * 24 23 22 43 43 H 1.09001 * 109.47185 * 210.02785 * 24 23 22 44 44 H 1.09000 * 109.47056 * 330.02991 * 24 23 22 45 45 H 1.08999 * 113.61272 * 334.56869 * 26 15 14 46 46 H 1.08999 * 113.61438 * 105.38707 * 26 15 14 47 47 H 1.08004 * 120.00288 * 179.70183 * 27 9 5 48 48 H 1.08001 * 120.00132 * 180.24833 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2115 0.0000 4 6 3.4313 1.2842 0.0005 5 6 4.0585 2.5151 0.0011 6 6 5.5634 2.5940 0.0011 7 8 6.0208 2.9670 1.3025 8 14 6.2723 0.9322 -0.4535 9 6 3.3032 3.6781 0.0016 10 8 3.9206 4.8897 0.0016 11 6 3.0806 6.0459 0.0016 12 6 3.9348 7.2873 0.0022 13 8 5.1439 7.1916 0.0022 14 7 3.3551 8.5041 0.0029 15 6 4.1855 9.7110 0.0095 16 1 5.1824 9.5367 0.4144 17 6 4.1860 10.4658 -1.3302 18 6 4.1374 11.7649 -0.5086 19 1 5.1217 12.1528 -0.2465 20 6 3.2301 12.8170 -1.0924 21 7 2.0852 12.6089 -1.6781 22 7 1.5863 13.7344 -2.0522 23 6 2.3956 14.6988 -1.7174 24 6 2.1845 16.1690 -1.9720 25 8 3.4504 14.1425 -1.0983 26 6 3.4825 10.9392 0.6114 27 6 1.9179 3.6055 0.0073 28 6 1.2909 2.3749 0.0010 29 1 -0.3634 0.5138 0.8899 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 4.0194 0.3783 0.0002 33 1 5.8882 3.3387 -0.7255 34 1 5.6902 3.8239 1.6049 35 1 5.8041 0.5328 -1.8051 36 1 7.7560 0.9882 -0.4260 37 1 2.4514 6.0377 0.8917 38 1 2.4513 6.0377 -0.8883 39 1 2.3882 8.5807 0.0033 40 1 5.1073 10.3438 -1.8998 41 1 3.2913 10.2940 -1.9286 42 1 1.6550 16.6114 -1.1283 43 1 3.1505 16.6593 -2.0922 44 1 1.5953 16.2996 -2.8797 45 1 2.3954 10.8966 0.5439 46 1 3.8348 11.1983 1.6098 47 1 1.3297 4.5113 0.0126 48 1 0.2124 2.3184 0.0014 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_4974302.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:33 Heat of formation + Delta-G solvation = -37.838811 kcal Electronic energy + Delta-G solvation = -33169.436276 eV Core-core repulsion = 28388.488593 eV Total energy + Delta-G solvation = -4780.947683 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.156 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -45.26971 -41.86673 -41.29594 -40.21614 -39.36958 -37.96099 -37.18731 -36.82461 -35.06348 -33.70934 -32.77402 -31.17280 -30.09905 -29.24064 -28.08912 -27.10678 -26.69841 -26.48350 -24.19178 -23.64787 -23.19360 -22.38510 -21.77836 -21.03717 -19.55130 -18.85894 -18.66836 -18.44727 -18.36383 -17.88054 -17.58696 -17.43578 -17.28325 -16.69860 -16.59475 -16.02465 -15.96367 -15.69355 -15.50981 -15.46390 -15.26559 -14.87303 -14.52806 -14.37934 -14.13522 -14.05962 -13.90347 -13.83233 -13.80366 -13.62122 -13.45471 -13.37257 -13.08308 -12.91589 -12.83354 -12.66942 -12.47313 -12.24464 -12.11151 -11.89751 -11.85922 -11.51361 -11.15134 -11.02045 -10.92458 -10.47940 -10.29025 -10.06229 -8.81239 -4.73693 0.06604 0.08593 0.35805 1.10225 1.30641 1.37398 1.39902 1.54410 1.79772 2.14938 2.26514 2.46143 2.57158 2.68839 3.02097 3.16004 3.31865 3.41227 3.47484 3.52863 3.55494 3.65528 3.74389 3.82606 3.91453 3.97039 4.09177 4.12048 4.13282 4.16737 4.18714 4.22360 4.26584 4.30833 4.34898 4.41985 4.44243 4.46644 4.54038 4.54656 4.58006 4.65897 4.69629 4.74083 4.90622 5.03628 5.11723 5.19655 5.25256 5.41341 6.05786 6.23625 6.39170 6.74868 6.97177 7.26634 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.314 6.314 3 C 0.104 3.896 4 C -0.103 4.103 5 C -0.098 4.098 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.743 3.257 9 C 0.099 3.901 10 O -0.290 6.290 11 C 0.040 3.960 12 C 0.519 3.481 13 O -0.510 6.510 14 N -0.716 5.716 15 C 0.131 3.869 16 H 0.127 0.873 17 C -0.136 4.136 18 C -0.021 4.021 19 H 0.129 0.871 20 C 0.173 3.827 21 N -0.282 5.282 22 N -0.289 5.289 23 C 0.164 3.836 24 C -0.061 4.061 25 O -0.224 6.224 26 C -0.130 4.130 27 C -0.165 4.165 28 C -0.165 4.165 29 H 0.056 0.944 30 H 0.055 0.945 31 H 0.103 0.897 32 H 0.146 0.854 33 H 0.078 0.922 34 H 0.368 0.632 35 H -0.251 1.251 36 H -0.254 1.254 37 H 0.096 0.904 38 H 0.095 0.905 39 H 0.406 0.594 40 H 0.088 0.912 41 H 0.104 0.896 42 H 0.101 0.899 43 H 0.094 0.906 44 H 0.108 0.892 45 H 0.100 0.900 46 H 0.092 0.908 47 H 0.133 0.867 48 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.200 3.609 1.784 6.577 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.058 3.942 4 C -0.121 4.121 5 C -0.100 4.100 6 C -0.180 4.180 7 O -0.339 6.339 8 Si 0.641 3.359 9 C 0.054 3.946 10 O -0.204 6.204 11 C -0.039 4.039 12 C 0.304 3.696 13 O -0.384 6.384 14 N -0.369 5.369 15 C 0.026 3.974 16 H 0.145 0.855 17 C -0.175 4.175 18 C -0.042 4.042 19 H 0.147 0.853 20 C -0.038 4.038 21 N -0.129 5.129 22 N -0.136 5.136 23 C -0.047 4.047 24 C -0.118 4.118 25 O -0.104 6.104 26 C -0.169 4.169 27 C -0.184 4.184 28 C -0.184 4.184 29 H 0.075 0.925 30 H 0.074 0.926 31 H 0.121 0.879 32 H 0.164 0.836 33 H 0.096 0.904 34 H 0.216 0.784 35 H -0.175 1.175 36 H -0.179 1.179 37 H 0.113 0.887 38 H 0.113 0.887 39 H 0.241 0.759 40 H 0.107 0.893 41 H 0.122 0.878 42 H 0.119 0.881 43 H 0.113 0.887 44 H 0.127 0.873 45 H 0.118 0.882 46 H 0.110 0.890 47 H 0.151 0.849 48 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -4.248 1.753 0.694 4.648 hybrid contribution -0.607 2.862 0.057 2.927 sum -4.855 4.616 0.751 6.741 Atomic orbital electron populations 1.23103 0.78056 1.04400 1.01333 1.86111 1.21549 1.26181 1.88875 1.18814 0.91912 0.84579 0.98861 1.20057 0.91636 0.96770 1.03644 1.19475 0.96603 0.90029 1.03846 1.25363 0.91495 1.12347 0.88808 1.86708 1.73781 1.41918 1.31462 0.93023 0.79746 0.80280 0.82824 1.18650 0.90822 0.84563 1.00532 1.86109 1.33874 1.11072 1.89297 1.22459 0.93173 0.84074 1.04165 1.20062 0.88841 0.84219 0.76500 1.90791 1.14108 1.86521 1.46963 1.45727 1.10474 1.04714 1.75992 1.22387 0.96653 0.82060 0.96318 0.85521 1.23634 1.05027 0.91184 0.97636 1.20986 0.96976 0.88342 0.97866 0.85343 1.27664 0.95915 0.80869 0.99326 1.74307 1.06733 1.18894 1.12925 1.74443 1.25057 0.94287 1.19801 1.28114 0.82447 1.00082 0.94007 1.20414 1.04939 0.81376 1.05120 1.84795 1.43347 1.21491 1.60756 1.23509 1.01825 0.93296 0.98257 1.21025 0.92827 0.98715 1.05789 1.21087 1.00344 0.91511 1.05436 0.92535 0.92610 0.87861 0.83647 0.90400 0.78389 1.17529 1.17910 0.88656 0.88742 0.75899 0.89346 0.87760 0.88078 0.88688 0.87307 0.88160 0.88958 0.84880 0.84692 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.43 10.50 -19.66 -0.21 -0.63 16 3 C 0.10 0.16 6.69 -39.24 -0.26 -0.10 16 4 C -0.10 -0.20 8.59 -39.45 -0.34 -0.54 16 5 C -0.10 -0.24 5.27 -104.50 -0.55 -0.80 16 6 C -0.07 -0.22 2.33 36.00 0.08 -0.13 16 7 O -0.53 -2.02 12.65 -35.23 -0.45 -2.46 16 8 Si 0.74 1.35 30.17 -169.99 -5.13 -3.78 16 9 C 0.10 0.17 6.62 -39.24 -0.26 -0.09 16 10 O -0.29 -0.55 8.56 -39.60 -0.34 -0.88 16 11 C 0.04 -0.07 5.22 36.00 0.19 0.12 16 12 C 0.52 0.11 7.91 -10.99 -0.09 0.02 16 13 O -0.51 -2.47 16.10 -14.35 -0.23 -2.71 16 14 N -0.72 1.90 5.35 -53.02 -0.28 1.62 16 15 C 0.13 -0.32 4.24 -67.12 -0.28 -0.60 16 16 H 0.13 -0.18 7.46 -51.93 -0.39 -0.57 16 17 C -0.14 0.26 7.42 -25.92 -0.19 0.07 16 18 C -0.02 0.05 4.29 -90.95 -0.39 -0.34 16 19 H 0.13 -0.49 8.14 -51.93 -0.42 -0.91 16 20 C 0.17 0.21 7.54 -12.94 -0.10 0.11 16 21 N -0.28 -0.97 11.84 32.55 0.39 -0.59 16 22 N -0.29 -1.14 12.22 32.55 0.40 -0.74 16 23 C 0.16 0.21 8.48 -12.94 -0.11 0.10 16 24 C -0.06 0.20 10.51 36.01 0.38 0.58 16 25 O -0.22 -0.36 10.87 5.37 0.06 -0.30 16 26 C -0.13 0.44 7.38 -25.91 -0.19 0.25 16 27 C -0.16 0.03 9.03 -39.45 -0.36 -0.33 16 28 C -0.16 -0.01 9.03 -39.45 -0.36 -0.36 16 29 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 30 H 0.06 -0.17 7.66 -51.93 -0.40 -0.56 16 31 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 32 H 0.15 0.05 5.13 -52.49 -0.27 -0.22 16 33 H 0.08 0.30 7.82 -51.93 -0.41 -0.11 16 34 H 0.37 0.86 8.60 45.56 0.39 1.25 16 35 H -0.25 -0.76 7.11 56.52 0.40 -0.36 16 36 H -0.25 -1.15 7.11 56.52 0.40 -0.75 16 37 H 0.10 -0.41 7.65 -51.93 -0.40 -0.80 16 38 H 0.09 -0.36 7.67 -51.93 -0.40 -0.76 16 39 H 0.41 -2.14 8.73 -40.82 -0.36 -2.49 16 40 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 41 H 0.10 -0.10 7.79 -51.93 -0.40 -0.50 16 42 H 0.10 -0.47 8.14 -51.93 -0.42 -0.90 16 43 H 0.09 -0.46 8.14 -51.93 -0.42 -0.88 16 44 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 45 H 0.10 -0.31 8.07 -51.93 -0.42 -0.72 16 46 H 0.09 -0.39 8.14 -51.93 -0.42 -0.82 16 47 H 0.13 -0.41 6.29 -52.48 -0.33 -0.74 16 48 H 0.14 -0.30 6.29 -52.49 -0.33 -0.63 16 LS Contribution 406.65 15.07 6.13 6.13 Total: 0.00 -11.97 406.65 -7.76 -19.73 By element: Atomic # 1 Polarization: -8.03 SS G_CDS: -6.26 Total: -14.29 kcal Atomic # 6 Polarization: 0.73 SS G_CDS: -1.84 Total: -1.10 kcal Atomic # 7 Polarization: -0.21 SS G_CDS: 0.50 Total: 0.29 kcal Atomic # 8 Polarization: -5.82 SS G_CDS: -1.16 Total: -6.99 kcal Atomic # 14 Polarization: 1.35 SS G_CDS: -5.13 Total: -3.78 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -11.97 -7.76 -19.73 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_4974302.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.107 kcal (2) G-P(sol) polarization free energy of solvation -11.973 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.080 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.759 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.732 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.839 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds