Wall clock time and date at job start Tue Mar 9 2021 13:11:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.30279 * 126.27953 * 2 1 4 4 N 1.28658 * 109.38001 * 180.02562 * 3 2 1 5 5 C 1.30276 * 109.38455 * 0.02562 * 4 3 2 6 6 C 1.50698 * 126.28731 * 179.97438 * 5 4 3 7 7 H 1.09000 * 112.85209 * 168.82658 * 6 5 4 8 8 C 1.53785 * 113.61152 * 300.02377 * 6 5 4 9 9 C 1.53778 * 87.08253 * 139.98068 * 8 6 5 10 10 H 1.08997 * 113.61877 * 89.19979 * 9 8 6 11 11 N 1.46501 * 113.61813 * 220.01876 * 9 8 6 12 12 C 1.34767 * 120.00515 * 205.00003 * 11 9 8 13 13 O 1.21643 * 120.00172 * 359.97438 * 12 11 9 14 14 C 1.47191 * 120.00261 * 180.02562 * 12 11 9 15 15 C 1.36004 * 123.46073 * 359.97050 * 14 12 11 16 16 S 1.70450 * 110.81791 * 180.02562 * 15 14 12 17 17 C 1.75501 * 92.44491 * 0.02562 * 16 15 14 18 18 C 1.50699 * 124.71164 * 179.97438 * 17 16 15 19 19 O 1.42905 * 109.46972 * 245.02662 * 18 17 16 20 20 Si 1.86295 * 109.47097 * 5.02302 * 18 17 16 21 21 C 1.32770 * 110.57569 * 0.24128 * 17 16 15 22 22 C 1.53785 * 87.08121 * 334.56446 * 9 8 6 23 23 O 1.34356 * 126.28619 * 180.29482 * 2 1 3 24 24 H 1.08998 * 109.47402 * 89.97399 * 1 2 3 25 25 H 1.09006 * 109.46743 * 209.96942 * 1 2 3 26 26 H 1.09001 * 109.47726 * 329.96940 * 1 2 3 27 27 H 1.08998 * 113.61712 * 25.43150 * 8 6 5 28 28 H 1.09004 * 113.68661 * 254.53816 * 8 6 5 29 29 H 0.97002 * 119.99223 * 24.99726 * 11 9 8 30 30 H 1.08001 * 124.59517 * 359.96843 * 15 14 12 31 31 H 1.09000 * 109.47247 * 125.02598 * 18 17 16 32 32 H 0.96696 * 114.00036 * 179.97438 * 19 18 17 33 33 H 1.48504 * 110.00018 * 178.68145 * 20 18 17 34 34 H 1.48496 * 110.00262 * 300.00047 * 20 18 17 35 35 H 1.08000 * 123.45994 * 179.74856 * 21 17 16 36 36 H 1.09003 * 113.61442 * 139.97744 * 22 9 8 37 37 H 1.09000 * 113.61691 * 270.88578 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5089 0.6762 -0.0005 5 6 3.5654 -0.6253 -0.0015 6 6 4.8176 -1.4637 -0.0029 7 1 4.6213 -2.5181 0.1912 8 6 5.7209 -1.2197 -1.2233 9 6 6.9156 -1.3176 -0.2601 10 1 7.2950 -2.3319 -0.1366 11 7 7.9746 -0.3441 -0.5377 12 6 9.2419 -0.6001 -0.1573 13 8 9.5065 -1.6393 0.4170 14 6 10.3058 0.3783 -0.4357 15 6 10.0894 1.5608 -1.0717 16 16 11.5410 2.4410 -1.2244 17 6 12.4712 1.1926 -0.4142 18 6 13.9540 1.2599 -0.1541 19 8 14.6148 0.2324 -0.8955 20 14 14.6027 2.9236 -0.6848 21 6 11.6880 0.1781 -0.0675 22 6 5.9519 -0.8782 0.8549 23 8 2.3021 -1.0830 -0.0056 24 1 -0.3634 0.0005 -1.0276 25 1 -0.3633 -0.8903 0.5134 26 1 -0.3634 0.8897 0.5143 27 1 5.5977 -0.2318 -1.6672 28 1 5.6873 -2.0221 -1.9604 29 1 7.7636 0.4848 -0.9953 30 1 9.1282 1.8963 -1.4322 31 1 14.1429 1.1188 0.9101 32 1 15.5742 0.2162 -0.7761 33 1 16.0582 3.0144 -0.4041 34 1 14.3513 3.1282 -2.1340 35 1 12.0470 -0.7047 0.4405 36 1 6.1040 -1.4058 1.7965 37 1 5.8918 0.2030 0.9792 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_6894386.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:01 Heat of formation + Delta-G solvation = 36.967846 kcal Electronic energy + Delta-G solvation = -23445.122733 eV Core-core repulsion = 19705.010779 eV Total energy + Delta-G solvation = -3740.111955 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.082 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -45.21467 -41.33757 -39.80020 -38.58076 -37.17950 -37.12916 -34.93148 -33.64739 -31.86786 -29.70122 -27.14092 -27.00879 -26.90245 -25.43753 -23.69458 -23.22647 -21.82877 -21.11451 -20.26447 -18.86273 -18.61115 -18.40391 -18.30897 -18.01173 -17.18561 -16.62386 -16.19659 -15.94861 -15.83163 -15.55455 -15.35721 -14.59881 -14.47715 -14.17094 -13.98796 -13.86565 -13.84911 -13.77611 -13.73250 -13.49979 -13.30992 -12.85603 -12.78850 -12.67909 -12.39671 -12.36711 -12.00397 -11.96888 -11.82282 -10.86001 -10.62094 -10.41296 -10.14502 -9.94462 -9.46358 -5.13148 -0.32683 0.12330 0.35314 0.71605 0.92887 1.17381 1.20123 1.37579 1.51241 1.83697 2.10692 2.36289 2.74683 3.11242 3.21558 3.26273 3.43518 3.57335 3.61310 3.62134 3.86406 3.95008 4.01832 4.20633 4.27259 4.28020 4.33740 4.39050 4.40709 4.50919 4.52012 4.62066 4.67137 4.75410 4.78535 4.79208 5.01674 5.09982 5.24718 5.43706 6.33493 6.44173 7.20729 7.32476 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.163 3.837 3 N -0.288 5.288 4 N -0.282 5.282 5 C 0.174 3.826 6 C -0.022 4.022 7 H 0.128 0.872 8 C -0.131 4.131 9 C 0.130 3.870 10 H 0.127 0.873 11 N -0.715 5.715 12 C 0.582 3.418 13 O -0.531 6.531 14 C -0.156 4.156 15 C -0.207 4.207 16 S 0.207 5.793 17 C -0.198 4.198 18 C -0.034 4.034 19 O -0.532 6.532 20 Si 0.645 3.355 21 C -0.053 4.053 22 C -0.135 4.135 23 O -0.225 6.225 24 H 0.100 0.900 25 H 0.094 0.906 26 H 0.108 0.892 27 H 0.099 0.901 28 H 0.091 0.909 29 H 0.402 0.598 30 H 0.173 0.827 31 H 0.087 0.913 32 H 0.383 0.617 33 H -0.238 1.238 34 H -0.234 1.234 35 H 0.156 0.844 36 H 0.088 0.912 37 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.051 1.804 -0.163 2.736 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.048 4.048 3 N -0.136 5.136 4 N -0.129 5.129 5 C -0.037 4.037 6 C -0.042 4.042 7 H 0.146 0.854 8 C -0.170 4.170 9 C 0.025 3.975 10 H 0.144 0.856 11 N -0.366 5.366 12 C 0.368 3.632 13 O -0.408 6.408 14 C -0.175 4.175 15 C -0.345 4.345 16 S 0.474 5.526 17 C -0.315 4.315 18 C -0.146 4.146 19 O -0.340 6.340 20 Si 0.544 3.456 21 C -0.082 4.082 22 C -0.174 4.174 23 O -0.104 6.104 24 H 0.119 0.881 25 H 0.113 0.887 26 H 0.127 0.873 27 H 0.117 0.883 28 H 0.110 0.890 29 H 0.238 0.762 30 H 0.190 0.810 31 H 0.105 0.895 32 H 0.231 0.769 33 H -0.161 1.161 34 H -0.158 1.158 35 H 0.173 0.827 36 H 0.106 0.894 37 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -1.167 4.014 -1.097 4.321 hybrid contribution -0.357 -3.081 0.257 3.112 sum -1.524 0.932 -0.840 1.974 Atomic orbital electron populations 1.20404 0.79990 1.05952 1.05462 1.28100 0.97955 0.79520 0.99222 1.74440 0.95950 1.25519 1.17649 1.74307 1.12387 1.08997 1.17166 1.27698 0.84680 0.91613 0.99688 1.21008 0.84061 0.98565 1.00564 0.85372 1.23506 0.92895 1.04488 0.96081 1.22361 0.85194 0.94953 0.94993 0.85571 1.45739 1.07246 1.22651 1.60958 1.17628 0.81806 0.85657 0.78079 1.90819 1.82470 1.26261 1.41272 1.20179 0.94738 0.95953 1.06596 1.25815 1.05094 0.99189 1.04392 1.83116 0.95878 1.19808 1.53810 1.23529 0.98321 1.00312 1.09302 1.24029 0.89860 1.01836 0.98910 1.86616 1.24403 1.52208 1.70747 0.95298 0.85538 0.79992 0.84794 1.21018 0.89871 0.98769 0.98592 1.23636 0.91819 1.03332 0.98637 1.84790 1.17573 1.38455 1.69610 0.88121 0.88723 0.87334 0.88273 0.89045 0.76211 0.80985 0.89491 0.76859 1.16092 1.15761 0.82695 0.89363 0.87790 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.18 10.51 36.00 0.38 0.56 16 2 C 0.16 0.27 8.48 -12.94 -0.11 0.16 16 3 N -0.29 -1.26 12.22 32.55 0.40 -0.86 16 4 N -0.28 -1.13 11.83 32.55 0.39 -0.74 16 5 C 0.17 0.31 7.53 -12.94 -0.10 0.21 16 6 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 7 H 0.13 -0.41 8.14 -51.93 -0.42 -0.84 16 8 C -0.13 0.30 7.38 -25.92 -0.19 0.11 16 9 C 0.13 -0.15 4.24 -67.12 -0.28 -0.43 16 10 H 0.13 -0.04 7.46 -51.93 -0.39 -0.43 16 11 N -0.71 0.35 5.32 -54.16 -0.29 0.06 16 12 C 0.58 1.55 7.79 -12.63 -0.10 1.45 16 13 O -0.53 -3.34 16.40 5.24 0.09 -3.25 16 14 C -0.16 -0.26 5.98 -104.63 -0.63 -0.89 16 15 C -0.21 0.16 10.38 29.93 0.31 0.47 16 16 S 0.21 -0.14 20.20 -107.50 -2.17 -2.31 16 17 C -0.20 -0.22 5.69 -36.18 -0.21 -0.42 16 18 C -0.03 0.01 2.93 36.01 0.11 0.11 16 19 O -0.53 -0.55 12.86 -35.23 -0.45 -1.00 16 20 Si 0.65 -0.83 30.92 -169.99 -5.26 -6.08 16 21 C -0.05 -0.13 9.95 -39.02 -0.39 -0.52 16 22 C -0.13 0.14 7.42 -25.91 -0.19 -0.05 16 23 O -0.22 -0.46 10.87 5.41 0.06 -0.40 16 24 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 25 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 26 H 0.11 -0.41 8.14 -51.93 -0.42 -0.84 16 27 H 0.10 -0.19 8.07 -51.93 -0.42 -0.61 16 28 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 29 H 0.40 -1.10 7.23 -40.82 -0.29 -1.40 16 30 H 0.17 -0.65 7.01 -52.49 -0.37 -1.02 16 31 H 0.09 -0.17 7.96 -51.93 -0.41 -0.58 16 32 H 0.38 -1.21 8.74 45.56 0.40 -0.82 16 33 H -0.24 -0.06 7.11 56.52 0.40 0.35 16 34 H -0.23 -0.32 7.11 56.52 0.40 0.08 16 35 H 0.16 0.47 8.06 -52.49 -0.42 0.05 16 36 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 37 H 0.10 0.00 7.78 -51.93 -0.40 -0.40 16 LS Contribution 338.57 15.07 5.10 5.10 Total: 0.00 -10.53 338.57 -7.97 -18.50 By element: Atomic # 1 Polarization: -5.37 SS G_CDS: -4.05 Total: -9.42 kcal Atomic # 6 Polarization: 2.19 SS G_CDS: -1.79 Total: 0.41 kcal Atomic # 7 Polarization: -2.04 SS G_CDS: 0.49 Total: -1.54 kcal Atomic # 8 Polarization: -4.35 SS G_CDS: -0.31 Total: -4.66 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.26 Total: -6.08 kcal Atomic # 16 Polarization: -0.14 SS G_CDS: -2.17 Total: -2.31 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -10.53 -7.97 -18.50 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_6894386.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.467 kcal (2) G-P(sol) polarization free energy of solvation -10.526 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.941 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.973 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.499 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.968 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds