Wall clock time and date at job start Tue Mar 9 2021 13:11:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.30279 * 126.27953 * 2 1 4 4 N 1.28658 * 109.38001 * 180.02562 * 3 2 1 5 5 C 1.30276 * 109.38455 * 0.02562 * 4 3 2 6 6 C 1.50698 * 126.28731 * 179.97438 * 5 4 3 7 7 H 1.09000 * 112.85209 * 168.82658 * 6 5 4 8 8 C 1.53785 * 113.61152 * 300.02377 * 6 5 4 9 9 C 1.53778 * 87.08253 * 139.98068 * 8 6 5 10 10 H 1.08997 * 113.61877 * 89.19979 * 9 8 6 11 11 N 1.46501 * 113.61813 * 220.01876 * 9 8 6 12 12 C 1.34767 * 120.00515 * 205.00003 * 11 9 8 13 13 O 1.21643 * 120.00172 * 359.97438 * 12 11 9 14 14 C 1.47191 * 120.00261 * 180.02562 * 12 11 9 15 15 C 1.36004 * 123.46073 * 359.97050 * 14 12 11 16 16 S 1.70450 * 110.81791 * 180.02562 * 15 14 12 17 17 C 1.75501 * 92.44491 * 0.02562 * 16 15 14 18 18 C 1.50699 * 124.71164 * 179.97438 * 17 16 15 19 19 O 1.42905 * 109.46972 * 245.02662 * 18 17 16 20 20 Si 1.86295 * 109.47097 * 5.02302 * 18 17 16 21 21 C 1.32770 * 110.57569 * 0.24128 * 17 16 15 22 22 C 1.53785 * 87.08121 * 334.56446 * 9 8 6 23 23 O 1.34356 * 126.28619 * 180.29482 * 2 1 3 24 24 H 1.08998 * 109.47402 * 89.97399 * 1 2 3 25 25 H 1.09006 * 109.46743 * 209.96942 * 1 2 3 26 26 H 1.09001 * 109.47726 * 329.96940 * 1 2 3 27 27 H 1.08998 * 113.61712 * 25.43150 * 8 6 5 28 28 H 1.09004 * 113.68661 * 254.53816 * 8 6 5 29 29 H 0.97002 * 119.99223 * 24.99726 * 11 9 8 30 30 H 1.08001 * 124.59517 * 359.96843 * 15 14 12 31 31 H 1.09000 * 109.47247 * 125.02598 * 18 17 16 32 32 H 0.96696 * 114.00036 * 179.97438 * 19 18 17 33 33 H 1.48504 * 110.00018 * 178.68145 * 20 18 17 34 34 H 1.48496 * 110.00262 * 300.00047 * 20 18 17 35 35 H 1.08000 * 123.45994 * 179.74856 * 21 17 16 36 36 H 1.09003 * 113.61442 * 139.97744 * 22 9 8 37 37 H 1.09000 * 113.61691 * 270.88578 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5089 0.6762 -0.0005 5 6 3.5654 -0.6253 -0.0015 6 6 4.8176 -1.4637 -0.0029 7 1 4.6213 -2.5181 0.1912 8 6 5.7209 -1.2197 -1.2233 9 6 6.9156 -1.3176 -0.2601 10 1 7.2950 -2.3319 -0.1366 11 7 7.9746 -0.3441 -0.5377 12 6 9.2419 -0.6001 -0.1573 13 8 9.5065 -1.6393 0.4170 14 6 10.3058 0.3783 -0.4357 15 6 10.0894 1.5608 -1.0717 16 16 11.5410 2.4410 -1.2244 17 6 12.4712 1.1926 -0.4142 18 6 13.9540 1.2599 -0.1541 19 8 14.6148 0.2324 -0.8955 20 14 14.6027 2.9236 -0.6848 21 6 11.6880 0.1781 -0.0675 22 6 5.9519 -0.8782 0.8549 23 8 2.3021 -1.0830 -0.0056 24 1 -0.3634 0.0005 -1.0276 25 1 -0.3633 -0.8903 0.5134 26 1 -0.3634 0.8897 0.5143 27 1 5.5977 -0.2318 -1.6672 28 1 5.6873 -2.0221 -1.9604 29 1 7.7636 0.4848 -0.9953 30 1 9.1282 1.8963 -1.4322 31 1 14.1429 1.1188 0.9101 32 1 15.5742 0.2162 -0.7761 33 1 16.0582 3.0144 -0.4041 34 1 14.3513 3.1282 -2.1340 35 1 12.0470 -0.7047 0.4405 36 1 6.1040 -1.4058 1.7965 37 1 5.8918 0.2030 0.9792 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_6894386.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:01 Heat of formation + Delta-G solvation = 30.726507 kcal Electronic energy + Delta-G solvation = -23445.393378 eV Core-core repulsion = 19705.010779 eV Total energy + Delta-G solvation = -3740.382599 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.082 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -45.32415 -41.39497 -39.81641 -38.63315 -37.27292 -37.23944 -35.02198 -33.63084 -31.87772 -29.64836 -27.17176 -26.92464 -26.90431 -25.50496 -23.74009 -23.28095 -21.90394 -21.08939 -20.30140 -18.86785 -18.62662 -18.51531 -18.35079 -18.07782 -17.22692 -16.55045 -16.19303 -16.07715 -15.89393 -15.55542 -15.37390 -14.62177 -14.29531 -14.17949 -13.94179 -13.86245 -13.80564 -13.66237 -13.59871 -13.56876 -13.40344 -12.98235 -12.78567 -12.68888 -12.39905 -12.35503 -12.03545 -11.93538 -11.86559 -11.03383 -10.60182 -10.48900 -10.22363 -9.96194 -9.46495 -5.04518 -0.34509 0.05747 0.36476 0.69862 0.81823 1.18366 1.21456 1.24529 1.57288 1.87991 2.09260 2.23538 2.77199 3.19043 3.30165 3.35289 3.48305 3.64668 3.66322 3.71995 3.89082 3.98822 4.03558 4.26508 4.30487 4.41196 4.42476 4.50003 4.53010 4.61517 4.66004 4.69159 4.71735 4.80441 4.87274 4.98227 5.01922 5.09292 5.16379 5.44964 6.42957 6.52983 7.11144 7.20130 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.167 3.833 3 N -0.331 5.331 4 N -0.311 5.311 5 C 0.176 3.824 6 C -0.018 4.018 7 H 0.150 0.850 8 C -0.118 4.118 9 C 0.128 3.872 10 H 0.119 0.881 11 N -0.701 5.701 12 C 0.580 3.420 13 O -0.578 6.578 14 C -0.182 4.182 15 C -0.191 4.191 16 S 0.243 5.757 17 C -0.211 4.211 18 C -0.049 4.049 19 O -0.556 6.556 20 Si 0.721 3.279 21 C -0.076 4.076 22 C -0.133 4.133 23 O -0.231 6.231 24 H 0.118 0.882 25 H 0.113 0.887 26 H 0.116 0.884 27 H 0.098 0.902 28 H 0.107 0.893 29 H 0.414 0.586 30 H 0.204 0.796 31 H 0.102 0.898 32 H 0.398 0.602 33 H -0.257 1.257 34 H -0.269 1.269 35 H 0.136 0.864 36 H 0.088 0.912 37 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.983 2.413 -0.787 3.916 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.043 4.043 3 N -0.177 5.177 4 N -0.156 5.156 5 C -0.036 4.036 6 C -0.039 4.039 7 H 0.167 0.833 8 C -0.156 4.156 9 C 0.023 3.977 10 H 0.137 0.863 11 N -0.352 5.352 12 C 0.368 3.632 13 O -0.459 6.459 14 C -0.200 4.200 15 C -0.330 4.330 16 S 0.509 5.491 17 C -0.327 4.327 18 C -0.160 4.160 19 O -0.367 6.367 20 Si 0.622 3.378 21 C -0.105 4.105 22 C -0.172 4.172 23 O -0.111 6.111 24 H 0.136 0.864 25 H 0.131 0.869 26 H 0.134 0.866 27 H 0.116 0.884 28 H 0.125 0.875 29 H 0.252 0.748 30 H 0.221 0.779 31 H 0.120 0.880 32 H 0.249 0.751 33 H -0.181 1.181 34 H -0.195 1.195 35 H 0.154 0.846 36 H 0.106 0.894 37 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -2.119 4.651 -1.720 5.392 hybrid contribution -0.077 -3.247 0.425 3.275 sum -2.195 1.404 -1.295 2.910 Atomic orbital electron populations 1.20702 0.76963 1.07225 1.06891 1.28982 0.99358 0.78858 0.97150 1.74370 0.96515 1.27017 1.19818 1.74221 1.12691 1.10186 1.18538 1.28218 0.85372 0.91401 0.98580 1.21222 0.82690 0.99138 1.00810 0.83257 1.23440 0.91328 1.05017 0.95850 1.22379 0.85162 0.94481 0.95668 0.86298 1.45662 1.06434 1.23135 1.59965 1.17837 0.82718 0.85199 0.77491 1.90786 1.83271 1.28163 1.43699 1.20108 0.94235 0.96990 1.08642 1.26167 1.06548 0.97925 1.02329 1.82999 0.95123 1.18449 1.52491 1.23811 0.99147 1.00643 1.09111 1.24368 0.89231 1.02475 0.99897 1.86568 1.25969 1.53007 1.71168 0.94459 0.83505 0.78075 0.81763 1.21010 0.90855 0.98916 0.99734 1.23573 0.92096 1.02707 0.98805 1.84810 1.17759 1.38693 1.69868 0.86411 0.86864 0.86552 0.88398 0.87457 0.74789 0.77915 0.88023 0.75073 1.18112 1.19454 0.84575 0.89372 0.88815 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.43 10.51 71.23 0.75 1.18 16 2 C 0.17 0.54 8.48 88.34 0.75 1.29 16 3 N -0.33 -3.13 12.22 -165.51 -2.02 -5.15 16 4 N -0.31 -2.72 11.83 -165.50 -1.96 -4.68 16 5 C 0.18 0.65 7.53 88.34 0.67 1.32 16 6 C -0.02 0.06 4.29 -11.01 -0.05 0.01 16 7 H 0.15 -1.11 8.14 -2.39 -0.02 -1.13 16 8 C -0.12 0.60 7.38 31.12 0.23 0.83 16 9 C 0.13 -0.24 4.24 45.52 0.19 -0.05 16 10 H 0.12 0.02 7.46 -2.39 -0.02 0.01 16 11 N -0.70 0.41 5.32 -443.52 -2.36 -1.95 16 12 C 0.58 3.89 7.79 86.60 0.67 4.56 16 13 O -0.58 -8.67 16.40 -4.17 -0.07 -8.74 16 14 C -0.18 -0.78 5.98 -19.87 -0.12 -0.90 16 15 C -0.19 0.41 10.38 67.30 0.70 1.11 16 16 S 0.24 -0.47 20.20 -56.49 -1.14 -1.62 16 17 C -0.21 -0.60 5.69 24.51 0.14 -0.46 16 18 C -0.05 0.00 2.93 71.24 0.21 0.21 16 19 O -0.56 -1.64 12.86 -148.98 -1.92 -3.55 16 20 Si 0.72 -2.02 30.92 68.60 2.12 0.10 16 21 C -0.08 -0.51 9.95 22.67 0.23 -0.28 16 22 C -0.13 0.21 7.42 31.12 0.23 0.44 16 23 O -0.23 -0.90 10.87 -3.57 -0.04 -0.94 16 24 H 0.12 -1.20 8.14 -2.39 -0.02 -1.22 16 25 H 0.11 -1.21 8.14 -2.38 -0.02 -1.23 16 26 H 0.12 -0.99 8.14 -2.39 -0.02 -1.01 16 27 H 0.10 -0.43 8.07 -2.39 -0.02 -0.45 16 28 H 0.11 -0.84 8.14 -2.39 -0.02 -0.86 16 29 H 0.41 -2.46 7.23 -92.71 -0.67 -3.13 16 30 H 0.20 -1.91 7.01 -2.91 -0.02 -1.93 16 31 H 0.10 -0.36 7.96 -2.39 -0.02 -0.38 16 32 H 0.40 -2.27 8.74 -74.06 -0.65 -2.92 16 33 H -0.26 -0.06 7.11 99.48 0.71 0.65 16 34 H -0.27 -0.78 7.11 99.48 0.71 -0.07 16 35 H 0.14 1.29 8.06 -2.91 -0.02 1.27 16 36 H 0.09 -0.14 8.14 -2.39 -0.02 -0.16 16 37 H 0.09 0.08 7.78 -2.39 -0.02 0.06 16 Total: 0.00 -26.84 338.57 -2.93 -29.76 By element: Atomic # 1 Polarization: -12.37 SS G_CDS: -0.14 Total: -12.50 kcal Atomic # 6 Polarization: 4.67 SS G_CDS: 4.60 Total: 9.26 kcal Atomic # 7 Polarization: -5.43 SS G_CDS: -6.34 Total: -11.77 kcal Atomic # 8 Polarization: -11.21 SS G_CDS: -2.02 Total: -13.24 kcal Atomic # 14 Polarization: -2.02 SS G_CDS: 2.12 Total: 0.10 kcal Atomic # 16 Polarization: -0.47 SS G_CDS: -1.14 Total: -1.62 kcal Total: -26.84 -2.93 -29.76 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_6894386.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.491 kcal (2) G-P(sol) polarization free energy of solvation -26.839 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.652 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.925 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.764 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.727 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds