Wall clock time and date at job start Tue Mar 9 2021 13:13:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.46501 * 120.00126 * 2 1 4 4 C 1.52999 * 109.47202 * 269.99838 * 3 2 1 5 5 H 1.09007 * 112.84803 * 43.80444 * 4 3 2 6 6 C 1.53778 * 113.61691 * 174.99604 * 4 3 2 7 7 C 1.53781 * 87.08154 * 139.98096 * 6 4 3 8 8 H 1.08997 * 113.61269 * 89.20607 * 7 6 4 9 9 O 1.42902 * 113.61232 * 220.02000 * 7 6 4 10 10 C 1.42901 * 113.99841 * 209.99846 * 9 7 6 11 11 C 1.52999 * 109.46892 * 60.00063 * 10 9 7 12 12 C 1.53000 * 109.47168 * 300.00404 * 10 9 7 13 13 C 1.52998 * 109.47451 * 180.02562 * 10 9 7 14 14 C 1.53778 * 113.61448 * 272.49524 * 4 3 2 15 15 C 1.34776 * 120.00262 * 179.97438 * 2 1 3 16 16 O 1.21688 * 120.00375 * 180.02562 * 15 2 1 17 17 C 1.46686 * 119.99916 * 0.02951 * 15 2 1 18 18 C 1.37864 * 126.23515 * 189.57758 * 17 15 2 19 19 C 1.39830 * 107.08779 * 179.84506 * 18 17 15 20 20 C 1.50698 * 126.06884 * 180.15499 * 19 18 17 21 21 O 1.42900 * 109.47270 * 65.28492 * 20 19 18 22 22 Si 1.86311 * 109.47023 * 185.28507 * 20 19 18 23 23 C 1.35454 * 107.86029 * 0.42179 * 19 18 17 24 24 N 1.35527 * 108.87395 * 359.73415 * 23 19 18 25 25 H 1.08999 * 109.46859 * 96.26115 * 1 2 3 26 26 H 1.09001 * 109.47008 * 216.25757 * 1 2 3 27 27 H 1.08995 * 109.47651 * 336.26300 * 1 2 3 28 28 H 1.09002 * 109.47433 * 149.99493 * 3 2 1 29 29 H 1.09006 * 109.46794 * 29.99390 * 3 2 1 30 30 H 1.08999 * 113.61202 * 25.43309 * 6 4 3 31 31 H 1.09002 * 113.61613 * 254.53325 * 6 4 3 32 32 H 1.09001 * 109.47465 * 300.00084 * 11 10 9 33 33 H 1.09004 * 109.47147 * 60.00526 * 11 10 9 34 34 H 1.09008 * 109.47255 * 179.97438 * 11 10 9 35 35 H 1.09004 * 109.47229 * 180.02562 * 12 10 9 36 36 H 1.08994 * 109.47051 * 299.99809 * 12 10 9 37 37 H 1.09001 * 109.47137 * 59.99947 * 12 10 9 38 38 H 1.09001 * 109.46963 * 300.00579 * 13 10 9 39 39 H 1.09004 * 109.46972 * 60.00002 * 13 10 9 40 40 H 1.08991 * 109.47468 * 180.02562 * 13 10 9 41 41 H 1.09005 * 113.61378 * 105.46686 * 14 4 3 42 42 H 1.09001 * 113.61621 * 334.57089 * 14 4 3 43 43 H 1.08004 * 126.45626 * 0.02562 * 18 17 15 44 44 H 1.08997 * 109.47482 * 305.28570 * 20 19 18 45 45 H 0.96703 * 113.99622 * 59.99905 * 21 20 19 46 46 H 1.48502 * 109.99900 * 180.02562 * 22 20 19 47 47 H 1.48500 * 109.99893 * 301.31857 * 22 20 19 48 48 H 1.08004 * 125.55881 * 179.75838 * 23 19 18 49 49 H 0.97000 * 125.67790 * 179.97438 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4526 1.7104 -1.4425 5 1 1.5792 1.5883 -2.0832 6 6 3.1105 3.0957 -1.5554 7 6 3.9636 2.5108 -2.6934 8 1 3.5050 2.6084 -3.6774 9 8 5.3247 2.9456 -2.6701 10 6 5.9360 3.0114 -3.9600 11 6 5.1630 3.9946 -4.8412 12 6 5.9162 1.6241 -4.6051 13 6 7.3836 3.4851 -3.8149 14 6 3.7454 1.1343 -2.0437 15 6 2.1389 -1.1672 0.0005 16 8 3.3558 -1.1672 0.0010 17 6 1.4055 -2.4375 0.0004 18 6 1.9476 -3.6915 0.1859 19 6 0.8950 -4.6091 0.1129 20 6 1.0097 -6.1044 0.2608 21 8 1.4257 -6.4210 1.5908 22 14 -0.6456 -6.8904 -0.0758 23 6 -0.2450 -3.9158 -0.1203 24 7 0.0515 -2.5952 -0.1908 25 1 -0.3633 -0.1121 -1.0215 26 1 -0.3633 -0.8287 0.6078 27 1 -0.3634 0.9407 0.4136 28 1 3.1499 1.1384 0.5139 29 1 1.6083 2.0284 0.5138 30 1 3.6896 3.3770 -0.6759 31 1 2.4260 3.8790 -1.8810 32 1 4.1319 3.6568 -4.9446 33 1 5.1772 4.9830 -4.3816 34 1 5.6296 4.0452 -5.8251 35 1 6.3829 1.6742 -5.5889 36 1 6.4668 0.9236 -3.9774 37 1 4.8850 1.2863 -4.7085 38 1 7.3981 4.4732 -3.3551 39 1 7.9340 2.7842 -3.1872 40 1 7.8497 3.5356 -4.7988 41 1 3.5734 0.3340 -2.7635 42 1 4.4981 0.8792 -1.2976 43 1 2.9887 -3.9215 0.3584 44 1 1.7436 -6.4846 -0.4496 45 1 0.8183 -6.1121 2.2769 46 1 -0.5461 -8.3651 0.0675 47 1 -1.6623 -6.3566 0.8658 48 1 -1.2297 -4.3453 -0.2316 49 1 -0.5844 -1.8803 -0.3499 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15093190_10543058.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:22 Heat of formation + Delta-G solvation = -17.955733 kcal Electronic energy + Delta-G solvation = -28167.496770 eV Core-core repulsion = 24292.030900 eV Total energy + Delta-G solvation = -3875.465869 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.193 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.66993 -41.11929 -40.17934 -38.39032 -37.83293 -36.61040 -33.92369 -32.74706 -31.00552 -29.66422 -28.41989 -28.38860 -27.66105 -26.58799 -26.43822 -24.36363 -22.71329 -21.29279 -20.93067 -20.71779 -20.56922 -18.95305 -17.84172 -17.57459 -17.42266 -16.99683 -16.89627 -16.39998 -16.01463 -15.92322 -15.56590 -15.48751 -14.97237 -14.75800 -14.51201 -14.46015 -14.39068 -14.15100 -13.86733 -13.60348 -13.48418 -13.42972 -13.38318 -13.31449 -13.05180 -12.91896 -12.76576 -12.70813 -12.42893 -12.26423 -12.07212 -11.80586 -11.75507 -11.38319 -11.24470 -11.21480 -10.48090 -10.37646 -10.03476 -9.79171 -9.27589 -4.83675 0.37504 1.39312 1.53899 1.67495 1.77379 2.07719 2.15226 2.27619 2.73515 3.38524 3.55610 3.60384 3.63587 3.78409 3.81442 3.87994 3.95814 3.97632 3.99607 4.07121 4.12045 4.15143 4.32093 4.33873 4.44683 4.47735 4.57955 4.60419 4.65032 4.69167 4.72872 4.74452 4.79003 4.83593 4.84933 4.88172 4.89251 4.91534 5.01349 5.03132 5.09431 5.18190 5.28989 5.30996 5.33862 5.46034 5.59804 5.75127 6.21261 6.42159 6.42268 6.62458 7.00882 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.046 3.954 2 N -0.610 5.610 3 C 0.128 3.872 4 C -0.113 4.113 5 H 0.109 0.891 6 C -0.120 4.120 7 C 0.058 3.942 8 H 0.100 0.900 9 O -0.385 6.385 10 C 0.097 3.903 11 C -0.173 4.173 12 C -0.173 4.173 13 C -0.139 4.139 14 C -0.142 4.142 15 C 0.580 3.420 16 O -0.569 6.569 17 C -0.066 4.066 18 C -0.108 4.108 19 C -0.222 4.222 20 C -0.063 4.063 21 O -0.558 6.558 22 Si 0.790 3.210 23 C 0.052 3.948 24 N -0.522 5.522 25 H 0.084 0.916 26 H 0.080 0.920 27 H 0.111 0.889 28 H 0.060 0.940 29 H 0.111 0.889 30 H 0.083 0.917 31 H 0.093 0.907 32 H 0.063 0.937 33 H 0.062 0.938 34 H 0.078 0.922 35 H 0.078 0.922 36 H 0.048 0.952 37 H 0.057 0.943 38 H 0.061 0.939 39 H 0.052 0.948 40 H 0.086 0.914 41 H 0.049 0.951 42 H 0.063 0.937 43 H 0.120 0.880 44 H 0.105 0.895 45 H 0.384 0.616 46 H -0.314 1.314 47 H -0.265 1.265 48 H 0.214 0.786 49 H 0.439 0.561 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.531 4.157 -4.160 12.062 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 N -0.342 5.342 3 C 0.005 3.995 4 C -0.132 4.132 5 H 0.127 0.873 6 C -0.158 4.158 7 C 0.001 3.999 8 H 0.117 0.883 9 O -0.305 6.305 10 C 0.058 3.942 11 C -0.231 4.231 12 C -0.230 4.230 13 C -0.197 4.197 14 C -0.180 4.180 15 C 0.371 3.629 16 O -0.448 6.448 17 C -0.179 4.179 18 C -0.135 4.135 19 C -0.228 4.228 20 C -0.171 4.171 21 O -0.366 6.366 22 Si 0.694 3.306 23 C -0.086 4.086 24 N -0.128 5.128 25 H 0.103 0.897 26 H 0.098 0.902 27 H 0.130 0.870 28 H 0.079 0.921 29 H 0.129 0.871 30 H 0.101 0.899 31 H 0.112 0.888 32 H 0.082 0.918 33 H 0.081 0.919 34 H 0.097 0.903 35 H 0.097 0.903 36 H 0.067 0.933 37 H 0.076 0.924 38 H 0.080 0.920 39 H 0.071 0.929 40 H 0.104 0.896 41 H 0.068 0.932 42 H 0.081 0.919 43 H 0.138 0.862 44 H 0.123 0.877 45 H 0.233 0.767 46 H -0.242 1.242 47 H -0.190 1.190 48 H 0.231 0.769 49 H 0.289 0.711 Dipole moment (debyes) X Y Z Total from point charges -10.046 3.715 -4.019 11.440 hybrid contribution 0.652 0.076 1.078 1.262 sum -9.394 3.792 -2.942 10.549 Atomic orbital electron populations 1.22550 0.77736 1.05871 1.03460 1.47791 1.08127 1.05275 1.73016 1.21579 0.97558 0.84103 0.96211 1.22676 0.97292 0.96257 0.96985 0.87270 1.23154 0.97624 0.96432 0.98569 1.23777 0.82601 0.94413 0.99145 0.88271 1.88022 1.25860 1.87273 1.29339 1.21685 0.94180 0.94849 0.83462 1.22420 1.00722 0.99419 1.00511 1.22434 1.02331 0.96616 1.01630 1.21794 0.93212 1.01547 1.03103 1.23427 0.97940 0.96755 0.99850 1.17395 0.86396 0.83044 0.76103 1.90842 1.14625 1.87191 1.52113 1.20131 0.84509 0.94307 1.18929 1.21203 0.99196 0.90894 1.02232 1.19880 0.93282 0.96096 1.13542 1.24801 1.13506 0.93130 0.85683 1.86571 1.52391 1.81407 1.16243 0.94224 0.72351 0.75478 0.88586 1.22463 1.00388 0.82779 1.03020 1.43106 1.06798 1.09012 1.53874 0.89748 0.90165 0.87037 0.92137 0.87058 0.89867 0.88844 0.91786 0.91892 0.90317 0.90280 0.93273 0.92401 0.92012 0.92898 0.89558 0.93213 0.91868 0.86154 0.87661 0.76690 1.24233 1.19016 0.76917 0.71130 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.50 8.92 127.77 1.14 0.64 16 2 N -0.61 0.47 2.87 -851.50 -2.45 -1.98 16 3 C 0.13 -0.08 5.28 86.38 0.46 0.38 16 4 C -0.11 0.12 3.96 -10.27 -0.04 0.08 16 5 H 0.11 -0.49 8.14 -2.38 -0.02 -0.51 16 6 C -0.12 0.10 7.47 31.12 0.23 0.33 16 7 C 0.06 0.17 2.82 31.12 0.09 0.26 16 8 H 0.10 0.02 5.54 -2.39 -0.01 0.00 16 9 O -0.39 -2.92 10.00 -148.98 -1.49 -4.41 16 10 C 0.10 0.33 1.11 -10.79 -0.01 0.32 16 11 C -0.17 0.06 8.38 71.98 0.60 0.66 16 12 C -0.17 -0.50 8.38 71.98 0.60 0.11 16 13 C -0.14 -0.35 8.84 71.98 0.64 0.29 16 14 C -0.14 -0.83 6.89 31.12 0.21 -0.62 16 15 C 0.58 4.42 7.64 86.45 0.66 5.08 16 16 O -0.57 -9.65 15.75 -4.31 -0.07 -9.72 16 17 C -0.07 -0.28 6.65 40.35 0.27 -0.02 16 18 C -0.11 -0.85 10.60 22.57 0.24 -0.61 16 19 C -0.22 -0.32 5.43 -20.12 -0.11 -0.43 16 20 C -0.06 -0.09 3.02 71.24 0.22 0.13 16 21 O -0.56 -3.24 12.88 -148.98 -1.92 -5.16 16 22 Si 0.79 -3.18 30.60 68.60 2.10 -1.08 16 23 C 0.05 -0.28 10.45 83.48 0.87 0.59 16 24 N -0.52 2.69 5.05 -183.62 -0.93 1.76 16 25 H 0.08 -1.24 7.73 -2.39 -0.02 -1.25 16 26 H 0.08 -0.96 5.19 -2.39 -0.01 -0.97 16 27 H 0.11 -1.65 7.82 -2.39 -0.02 -1.67 16 28 H 0.06 0.37 7.12 -2.39 -0.02 0.35 16 29 H 0.11 -0.74 7.85 -2.38 -0.02 -0.76 16 30 H 0.08 0.12 8.10 -2.39 -0.02 0.10 16 31 H 0.09 -0.44 8.14 -2.39 -0.02 -0.45 16 32 H 0.06 -0.10 6.24 -2.39 -0.01 -0.11 16 33 H 0.06 0.02 8.14 -2.38 -0.02 0.00 16 34 H 0.08 -0.20 8.14 -2.38 -0.02 -0.22 16 35 H 0.08 -0.01 8.14 -2.39 -0.02 -0.03 16 36 H 0.05 0.30 8.14 -2.39 -0.02 0.28 16 37 H 0.06 0.15 7.02 -2.39 -0.02 0.13 16 38 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 39 H 0.05 0.25 8.14 -2.38 -0.02 0.23 16 40 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 41 H 0.05 0.38 8.14 -2.38 -0.02 0.36 16 42 H 0.06 0.81 7.75 -2.39 -0.02 0.79 16 43 H 0.12 1.51 8.06 -2.91 -0.02 1.48 16 44 H 0.11 0.23 7.96 -2.39 -0.02 0.21 16 45 H 0.38 -0.32 8.70 -74.05 -0.64 -0.96 16 46 H -0.31 -1.68 7.11 99.48 0.71 -0.97 16 47 H -0.26 0.84 7.11 99.48 0.71 1.54 16 48 H 0.21 -2.90 6.21 -2.91 -0.02 -2.92 16 49 H 0.44 -5.36 4.92 -92.71 -0.46 -5.82 16 Total: 0.00 -25.70 384.87 1.21 -24.49 By element: Atomic # 1 Polarization: -10.99 SS G_CDS: -0.11 Total: -11.10 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: 6.07 Total: 7.20 kcal Atomic # 7 Polarization: 3.16 SS G_CDS: -3.37 Total: -0.22 kcal Atomic # 8 Polarization: -15.82 SS G_CDS: -3.48 Total: -19.30 kcal Atomic # 14 Polarization: -3.18 SS G_CDS: 2.10 Total: -1.08 kcal Total: -25.70 1.21 -24.49 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15093190_10543058.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.538 kcal (2) G-P(sol) polarization free energy of solvation -25.701 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.163 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.208 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.494 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.956 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds