Wall clock time and date at job start Tue Mar 9 2021 13:13:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.35448 * 125.56619 * 2 1 4 4 C 1.50701 * 126.06712 * 359.94793 * 3 2 1 5 5 O 1.42898 * 109.47090 * 245.33766 * 4 3 2 6 6 Si 1.86300 * 109.47103 * 125.33851 * 4 3 2 7 7 C 1.39834 * 107.86549 * 179.97438 * 3 2 1 8 8 C 1.50703 * 126.45728 * 180.02562 * 7 3 2 9 9 C 1.37873 * 107.08770 * 0.02562 * 7 3 2 10 10 C 1.46680 * 126.23357 * 179.97438 * 9 7 3 11 11 O 1.21690 * 120.00131 * 6.55380 * 10 9 7 12 12 N 1.34775 * 119.99796 * 186.55805 * 10 9 7 13 13 C 1.46503 * 120.00135 * 5.61272 * 12 10 9 14 14 C 1.46499 * 120.00144 * 185.61278 * 12 10 9 15 15 C 1.52992 * 109.47329 * 270.00076 * 14 12 10 16 16 H 1.09002 * 112.85114 * 43.80172 * 15 14 12 17 17 C 1.53785 * 113.61397 * 174.99713 * 15 14 12 18 18 C 1.53783 * 87.07840 * 139.98232 * 17 15 14 19 19 H 1.09000 * 113.61704 * 89.19970 * 18 17 15 20 20 O 1.42901 * 113.61388 * 220.01865 * 18 17 15 21 21 C 1.42897 * 114.00202 * 210.00204 * 20 18 17 22 22 C 1.53000 * 109.47395 * 59.99663 * 21 20 18 23 23 C 1.53004 * 109.47359 * 180.02562 * 21 20 18 24 24 C 1.53005 * 109.47116 * 300.00160 * 21 20 18 25 25 C 1.53777 * 87.08255 * 334.56931 * 18 17 15 26 26 N 1.35537 * 125.56449 * 180.23521 * 2 1 3 27 27 H 1.08996 * 109.47420 * 84.41344 * 1 2 3 28 28 H 1.09002 * 109.46615 * 204.41439 * 1 2 3 29 29 H 1.09001 * 109.46355 * 324.40763 * 1 2 3 30 30 H 1.08997 * 109.46604 * 5.33643 * 4 3 2 31 31 H 0.96704 * 114.00252 * 299.99885 * 5 4 3 32 32 H 1.48502 * 109.99705 * 184.29118 * 6 4 3 33 33 H 1.48507 * 109.99746 * 305.60813 * 6 4 3 34 34 H 1.08999 * 109.47253 * 269.98315 * 8 7 3 35 35 H 1.08997 * 109.47131 * 29.98480 * 8 7 3 36 36 H 1.09002 * 109.47330 * 149.98160 * 8 7 3 37 37 H 1.08998 * 109.47426 * 275.85866 * 13 12 10 38 38 H 1.09002 * 109.46955 * 35.85571 * 13 12 10 39 39 H 1.08996 * 109.46992 * 155.85410 * 13 12 10 40 40 H 1.08999 * 109.46630 * 30.00086 * 14 12 10 41 41 H 1.09000 * 109.47148 * 149.99647 * 14 12 10 42 42 H 1.08996 * 113.61343 * 254.52707 * 17 15 14 43 43 H 1.08989 * 113.61298 * 25.43672 * 17 15 14 44 44 H 1.09005 * 109.46734 * 60.00402 * 22 21 20 45 45 H 1.08998 * 109.47474 * 180.02562 * 22 21 20 46 46 H 1.09001 * 109.47389 * 300.00487 * 22 21 20 47 47 H 1.08997 * 109.47016 * 59.99682 * 23 21 20 48 48 H 1.08998 * 109.47269 * 180.02562 * 23 21 20 49 49 H 1.08994 * 109.46808 * 299.99597 * 23 21 20 50 50 H 1.08991 * 109.47335 * 59.99488 * 24 21 20 51 51 H 1.08998 * 109.47127 * 179.97438 * 24 21 20 52 52 H 1.09010 * 109.46732 * 299.99710 * 24 21 20 53 53 H 1.09000 * 113.61097 * 270.88579 * 25 18 17 54 54 H 1.09001 * 113.61770 * 139.98664 * 25 18 17 55 55 H 0.97007 * 125.67867 * 0.06545 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8200 2.5320 -0.0011 5 8 2.2043 3.1606 -1.2255 6 14 2.5874 3.4423 1.4318 7 6 3.6270 0.6766 0.0006 8 6 4.8486 1.5591 0.0014 9 6 3.6122 -0.7020 0.0004 10 6 4.7860 -1.5816 0.0003 11 8 5.9008 -1.1087 0.1207 12 7 4.6299 -2.9136 -0.1333 13 6 3.3024 -3.4724 -0.4013 14 6 5.7877 -3.8028 -0.0104 15 6 6.4289 -3.9981 -1.3857 16 1 6.5163 -3.0684 -1.9479 17 6 7.7282 -4.8200 -1.3484 18 6 7.2445 -5.4967 -2.6419 19 1 7.5557 -4.9781 -3.5487 20 8 7.5088 -6.9003 -2.6869 21 6 7.7155 -7.4109 -4.0054 22 6 8.9136 -6.7052 -4.6436 23 6 7.9877 -8.9148 -3.9332 24 6 6.4656 -7.1594 -4.8515 25 6 5.8142 -5.1532 -2.1936 26 7 2.2953 -1.1025 -0.0045 27 1 -0.3634 0.1000 -1.0227 28 1 -0.3632 -0.9358 0.4248 29 1 -0.3632 0.8357 0.5981 30 1 0.7344 2.5544 0.0937 31 1 3.1594 3.1769 -1.3764 32 1 2.0480 4.8240 1.5033 33 1 2.3077 2.7216 2.6998 34 1 5.1439 1.7718 -1.0261 35 1 4.6217 2.4933 0.5150 36 1 5.6640 1.0505 0.5158 37 1 2.7635 -3.5953 0.5382 38 1 2.7482 -2.7961 -1.0522 39 1 3.4078 -4.4413 -0.8892 40 1 6.5150 -3.3602 0.6701 41 1 5.4648 -4.7678 0.3803 42 1 8.6284 -4.2197 -1.4801 43 1 7.7913 -5.4986 -0.4979 44 1 9.8041 -6.8844 -4.0410 45 1 9.0710 -7.0943 -5.6496 46 1 8.7193 -5.6339 -4.6952 47 1 7.1338 -9.4171 -3.4788 48 1 8.1458 -9.3041 -4.9389 49 1 8.8779 -9.0942 -3.3305 50 1 6.2712 -6.0882 -4.9029 51 1 6.6235 -7.5484 -5.8573 52 1 5.6120 -7.6622 -4.3968 53 1 5.3541 -5.9229 -1.5741 54 1 5.1692 -4.8220 -3.0075 55 1 1.9834 -2.0211 -0.0092 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15093190_12297754.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:34 Heat of formation + Delta-G solvation = -30.177869 kcal Electronic energy + Delta-G solvation = -32561.968027 eV Core-core repulsion = 28374.896928 eV Total energy + Delta-G solvation = -4187.071099 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.224 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.82721 -41.12632 -40.21268 -38.42804 -37.77368 -36.57942 -33.93858 -33.74590 -32.99814 -30.00553 -29.23449 -28.50120 -28.36337 -28.34618 -26.67587 -26.43542 -26.18936 -23.80829 -21.69422 -21.16935 -20.74175 -20.54954 -20.04380 -18.50140 -17.81733 -17.70822 -17.22503 -16.99431 -16.89306 -16.40521 -16.04533 -15.89961 -15.46478 -15.30955 -15.22407 -14.62038 -14.58679 -14.50222 -14.37734 -14.25349 -14.06146 -13.91469 -13.67969 -13.55114 -13.48140 -13.41150 -13.25877 -13.25228 -13.17149 -13.00427 -12.87454 -12.79745 -12.67776 -12.63403 -12.40571 -12.19555 -12.05204 -11.99630 -11.81848 -11.36503 -11.23355 -10.98850 -10.52749 -10.36598 -9.87167 -9.53193 -8.97859 -4.93088 0.36277 1.22139 1.52506 1.73017 1.78282 1.97612 2.11782 2.28325 2.72939 3.44196 3.54395 3.61991 3.68060 3.78367 3.81291 3.83050 3.89451 3.94234 3.97850 4.00531 4.08982 4.12062 4.14115 4.25948 4.32108 4.35073 4.44458 4.53711 4.58157 4.59572 4.62578 4.64847 4.68601 4.72289 4.77065 4.80296 4.81832 4.85172 4.90223 4.91018 4.92462 4.94962 5.00546 5.03265 5.10579 5.12369 5.17403 5.30106 5.30958 5.33402 5.35117 5.49651 5.71269 5.88625 6.23078 6.41365 6.42106 6.78206 7.02810 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.074 3.926 3 C -0.226 4.226 4 C -0.025 4.025 5 O -0.555 6.555 6 Si 0.730 3.270 7 C -0.075 4.075 8 C -0.095 4.095 9 C -0.075 4.075 10 C 0.585 3.415 11 O -0.557 6.557 12 N -0.612 5.612 13 C 0.052 3.948 14 C 0.132 3.868 15 C -0.115 4.115 16 H 0.078 0.922 17 C -0.129 4.129 18 C 0.059 3.941 19 H 0.090 0.910 20 O -0.379 6.379 21 C 0.098 3.902 22 C -0.178 4.178 23 C -0.139 4.139 24 C -0.172 4.172 25 C -0.138 4.138 26 N -0.530 5.530 27 H 0.089 0.911 28 H 0.088 0.912 29 H 0.086 0.914 30 H 0.113 0.887 31 H 0.388 0.612 32 H -0.288 1.288 33 H -0.295 1.295 34 H 0.087 0.913 35 H 0.085 0.915 36 H 0.074 0.926 37 H 0.077 0.923 38 H 0.076 0.924 39 H 0.105 0.895 40 H 0.071 0.929 41 H 0.102 0.898 42 H 0.069 0.931 43 H 0.092 0.908 44 H 0.058 0.942 45 H 0.077 0.923 46 H 0.059 0.941 47 H 0.060 0.940 48 H 0.083 0.917 49 H 0.057 0.943 50 H 0.057 0.943 51 H 0.074 0.926 52 H 0.061 0.939 53 H 0.094 0.906 54 H 0.070 0.930 55 H 0.431 0.569 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.890 -4.679 -2.370 5.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.046 4.046 3 C -0.232 4.232 4 C -0.136 4.136 5 O -0.362 6.362 6 Si 0.637 3.363 7 C -0.084 4.084 8 C -0.151 4.151 9 C -0.187 4.187 10 C 0.375 3.625 11 O -0.436 6.436 12 N -0.344 5.344 13 C -0.091 4.091 14 C 0.010 3.990 15 C -0.134 4.134 16 H 0.096 0.904 17 C -0.167 4.167 18 C 0.002 3.998 19 H 0.107 0.893 20 O -0.299 6.299 21 C 0.060 3.940 22 C -0.235 4.235 23 C -0.196 4.196 24 C -0.229 4.229 25 C -0.175 4.175 26 N -0.136 5.136 27 H 0.108 0.892 28 H 0.107 0.893 29 H 0.105 0.895 30 H 0.130 0.870 31 H 0.237 0.763 32 H -0.216 1.216 33 H -0.222 1.222 34 H 0.105 0.895 35 H 0.102 0.898 36 H 0.093 0.907 37 H 0.095 0.905 38 H 0.095 0.905 39 H 0.123 0.877 40 H 0.090 0.910 41 H 0.120 0.880 42 H 0.088 0.912 43 H 0.111 0.889 44 H 0.077 0.923 45 H 0.096 0.904 46 H 0.078 0.922 47 H 0.079 0.921 48 H 0.102 0.898 49 H 0.076 0.924 50 H 0.076 0.924 51 H 0.093 0.907 52 H 0.080 0.920 53 H 0.113 0.887 54 H 0.089 0.911 55 H 0.280 0.720 Dipole moment (debyes) X Y Z Total from point charges -3.078 -4.323 -1.441 5.499 hybrid contribution -0.499 -0.622 -0.279 0.845 sum -3.577 -4.944 -1.720 6.340 Atomic orbital electron populations 1.20595 0.85607 1.04786 1.04361 1.20811 0.94883 0.85821 1.03095 1.19615 0.92667 0.95591 1.15369 1.24227 1.02829 0.90941 0.95646 1.86442 1.29977 1.79960 1.39831 0.93812 0.91640 0.76072 0.74773 1.19999 0.95215 0.91666 1.01481 1.20536 0.93888 0.97298 1.03348 1.19970 0.83543 0.93906 1.21294 1.17269 0.87185 0.81782 0.76240 1.90795 1.25690 1.75200 1.51914 1.47760 1.10156 1.05317 1.71168 1.22386 0.83093 1.01577 1.02012 1.21513 0.87125 0.94000 0.96366 1.22542 0.96712 0.97307 0.96859 0.90353 1.23214 0.97301 0.97867 0.98288 1.23648 0.96156 0.81856 0.98172 0.89252 1.88008 1.91093 1.22702 1.28075 1.21663 0.94493 0.95015 0.82865 1.22458 0.98222 1.00900 1.01945 1.21785 1.02262 0.92423 1.03108 1.22424 0.97664 1.02170 1.00653 1.23545 0.96694 0.97246 1.00037 1.42946 1.04599 1.09466 1.56577 0.89239 0.89341 0.89504 0.87004 0.76305 1.21551 1.22241 0.89494 0.89752 0.90739 0.90461 0.90536 0.87687 0.91049 0.88013 0.91219 0.88923 0.92308 0.90428 0.92246 0.92107 0.89846 0.92399 0.92375 0.90734 0.92001 0.88711 0.91128 0.72049 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.55 9.97 71.24 0.71 1.26 16 2 C 0.07 0.01 7.13 41.34 0.29 0.30 16 3 C -0.23 -0.69 4.66 -20.12 -0.09 -0.78 16 4 C -0.02 -0.06 2.88 71.24 0.21 0.15 16 5 O -0.55 -1.74 12.88 -148.98 -1.92 -3.66 16 6 Si 0.73 2.02 29.29 68.60 2.01 4.03 16 7 C -0.07 -0.34 5.82 -19.56 -0.11 -0.45 16 8 C -0.09 -0.16 8.73 71.24 0.62 0.46 16 9 C -0.08 -0.32 6.65 40.35 0.27 -0.05 16 10 C 0.58 3.56 7.63 86.45 0.66 4.22 16 11 O -0.56 -6.93 14.42 -4.32 -0.06 -6.99 16 12 N -0.61 0.24 2.87 -851.52 -2.45 -2.21 16 13 C 0.05 -0.41 8.80 127.77 1.12 0.71 16 14 C 0.13 -0.11 5.17 86.38 0.45 0.34 16 15 C -0.11 0.06 3.96 -10.27 -0.04 0.02 16 16 H 0.08 0.27 8.14 -2.39 -0.02 0.25 16 17 C -0.13 -0.05 7.47 31.12 0.23 0.19 16 18 C 0.06 0.02 2.82 31.12 0.09 0.10 16 19 H 0.09 0.00 5.54 -2.39 -0.01 -0.02 16 20 O -0.38 -1.26 10.00 -148.98 -1.49 -2.75 16 21 C 0.10 0.02 1.11 -10.79 -0.01 0.01 16 22 C -0.18 0.15 8.38 71.98 0.60 0.75 16 23 C -0.14 0.11 8.84 71.98 0.64 0.75 16 24 C -0.17 0.33 8.38 71.98 0.60 0.93 16 25 C -0.14 0.35 7.15 31.12 0.22 0.57 16 26 N -0.53 0.72 5.09 -171.93 -0.88 -0.15 16 27 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 28 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 29 H 0.09 -0.50 7.27 -2.39 -0.02 -0.52 16 30 H 0.11 0.12 6.66 -2.39 -0.02 0.11 16 31 H 0.39 -1.19 7.86 -74.05 -0.58 -1.77 16 32 H -0.29 -2.42 7.11 99.48 0.71 -1.72 16 33 H -0.30 -2.68 7.11 99.48 0.71 -1.98 16 34 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 35 H 0.08 -0.24 4.32 -2.39 -0.01 -0.25 16 36 H 0.07 0.44 6.38 -2.39 -0.02 0.42 16 37 H 0.08 -0.85 7.54 -2.39 -0.02 -0.86 16 38 H 0.08 -0.63 5.54 -2.39 -0.01 -0.65 16 39 H 0.10 -1.14 7.71 -2.39 -0.02 -1.16 16 40 H 0.07 0.23 7.50 -2.39 -0.02 0.22 16 41 H 0.10 -0.51 7.77 -2.39 -0.02 -0.52 16 42 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 43 H 0.09 0.03 8.10 -2.39 -0.02 0.01 16 44 H 0.06 0.04 8.14 -2.38 -0.02 0.02 16 45 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 46 H 0.06 -0.05 6.24 -2.39 -0.01 -0.07 16 47 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 48 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 49 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 50 H 0.06 -0.11 7.02 -2.39 -0.02 -0.13 16 51 H 0.07 -0.27 8.14 -2.39 -0.02 -0.28 16 52 H 0.06 -0.08 8.14 -2.38 -0.02 -0.10 16 53 H 0.09 -0.31 7.90 -2.39 -0.02 -0.33 16 54 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 55 H 0.43 -3.16 4.86 -92.70 -0.45 -3.61 16 Total: 0.00 -19.06 418.39 1.57 -17.48 By element: Atomic # 1 Polarization: -15.13 SS G_CDS: -0.10 Total: -15.22 kcal Atomic # 6 Polarization: 3.02 SS G_CDS: 6.46 Total: 9.47 kcal Atomic # 7 Polarization: 0.96 SS G_CDS: -3.32 Total: -2.36 kcal Atomic # 8 Polarization: -9.93 SS G_CDS: -3.47 Total: -13.40 kcal Atomic # 14 Polarization: 2.02 SS G_CDS: 2.01 Total: 4.03 kcal Total: -19.06 1.57 -17.48 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15093190_12297754.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.695 kcal (2) G-P(sol) polarization free energy of solvation -19.057 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.752 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.574 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.483 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.178 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds