Wall clock time and date at job start Tue Mar 9 2021 13:14:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.46500 * 120.00489 * 2 1 4 4 C 1.53001 * 109.46592 * 90.00210 * 3 2 1 5 5 H 1.08996 * 112.85688 * 314.66780 * 4 3 2 6 6 C 1.53779 * 113.68995 * 85.94017 * 4 3 2 7 7 C 1.53780 * 87.08462 * 139.98842 * 6 4 3 8 8 H 1.09004 * 113.69218 * 89.12418 * 7 6 4 9 9 O 1.42896 * 113.61922 * 220.01750 * 7 6 4 10 10 C 1.42894 * 114.00156 * 247.49520 * 9 7 6 11 11 C 1.53002 * 109.47062 * 60.00288 * 10 9 7 12 12 C 1.53000 * 109.46988 * 179.97438 * 10 9 7 13 13 C 1.52997 * 109.47342 * 299.99654 * 10 9 7 14 14 C 1.53780 * 87.07888 * 334.56846 * 7 6 4 15 15 C 1.34783 * 119.99562 * 180.02562 * 2 1 3 16 16 O 1.21557 * 119.99414 * 186.95877 * 15 2 1 17 17 C 1.47843 * 120.00007 * 6.95529 * 15 2 1 18 18 C 1.39541 * 120.14145 * 20.33704 * 17 15 2 19 19 C 1.38069 * 119.83973 * 179.72012 * 18 17 15 20 20 Br 1.89110 * 119.93883 * 180.27521 * 19 18 17 21 21 C 1.38427 * 120.12631 * 0.55369 * 19 18 17 22 22 C 1.38359 * 120.28238 * 359.72360 * 21 19 18 23 23 C 1.50700 * 119.92399 * 180.02562 * 22 21 19 24 24 O 1.42897 * 109.46975 * 244.97418 * 23 22 21 25 25 Si 1.86300 * 109.46911 * 4.97474 * 23 22 21 26 26 C 1.37944 * 120.15423 * 359.97438 * 22 21 19 27 27 H 1.09002 * 109.47310 * 85.86120 * 1 2 3 28 28 H 1.09001 * 109.46948 * 205.86310 * 1 2 3 29 29 H 1.09003 * 109.46758 * 325.86264 * 1 2 3 30 30 H 1.08997 * 109.47170 * 330.00980 * 3 2 1 31 31 H 1.08993 * 109.47468 * 210.00365 * 3 2 1 32 32 H 1.08999 * 113.61622 * 254.53680 * 6 4 3 33 33 H 1.09004 * 113.61749 * 25.43912 * 6 4 3 34 34 H 1.08994 * 109.47501 * 59.99447 * 11 10 9 35 35 H 1.09000 * 109.47449 * 180.02562 * 11 10 9 36 36 H 1.09007 * 109.46633 * 299.99559 * 11 10 9 37 37 H 1.09001 * 109.47070 * 60.00264 * 12 10 9 38 38 H 1.09004 * 109.47242 * 179.97438 * 12 10 9 39 39 H 1.09001 * 109.47497 * 300.00296 * 12 10 9 40 40 H 1.09001 * 109.46438 * 60.00133 * 13 10 9 41 41 H 1.09001 * 109.46955 * 179.97438 * 13 10 9 42 42 H 1.09001 * 109.47215 * 300.00042 * 13 10 9 43 43 H 1.09004 * 113.61148 * 270.87829 * 14 7 6 44 44 H 1.09000 * 113.61596 * 139.97952 * 14 7 6 45 45 H 1.07998 * 120.07541 * 359.97438 * 18 17 15 46 46 H 1.08002 * 119.85974 * 179.74054 * 21 19 18 47 47 H 1.09000 * 109.47206 * 124.97172 * 23 22 21 48 48 H 0.96705 * 113.99840 * 179.97438 * 24 23 22 49 49 H 1.48497 * 109.99827 * 178.67917 * 25 23 22 50 50 H 1.48495 * 110.00020 * 300.00055 * 25 23 22 51 51 H 1.08005 * 120.06254 * 179.97438 * 26 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1976 1.2687 0.0000 4 6 2.4526 1.7102 1.4426 5 1 1.5717 1.6131 2.0771 6 6 3.7250 1.1046 2.0583 7 6 3.9723 2.4786 2.7032 8 1 3.5074 2.5928 3.6825 9 8 5.3441 2.8786 2.6902 10 6 5.9453 2.9356 3.9852 11 6 5.8845 1.5526 4.6369 12 6 7.4056 3.3717 3.8508 13 6 5.1897 3.9427 4.8545 14 6 3.1445 3.0790 1.5546 15 6 2.1388 -1.1673 -0.0005 16 8 3.3477 -1.1712 0.1270 17 6 1.4077 -2.4428 -0.1561 18 6 0.1289 -2.4538 -0.7144 19 6 -0.5460 -3.6493 -0.8622 20 35 -2.2760 -3.6683 -1.6256 21 6 0.0390 -4.8332 -0.4472 22 6 1.3044 -4.8276 0.1123 23 6 1.9338 -6.1214 0.5607 24 8 2.1065 -6.1006 1.9791 25 14 0.8286 -7.5454 0.0904 26 6 1.9916 -3.6407 0.2597 27 1 -0.3634 0.0742 -1.0250 28 1 -0.3633 -0.9248 0.4483 29 1 -0.3633 0.8506 0.5767 30 1 1.6085 2.0284 -0.5137 31 1 3.1499 1.1383 -0.5138 32 1 3.5264 0.3127 2.7805 33 1 4.4777 0.8268 1.3204 34 1 6.4228 0.8351 4.0177 35 1 6.3427 1.5961 5.6250 36 1 4.8442 1.2415 4.7326 37 1 7.4493 4.3569 3.3864 38 1 7.8641 3.4156 4.8388 39 1 7.9437 2.6540 3.2317 40 1 4.1494 3.6315 4.9501 41 1 5.6480 3.9858 5.8425 42 1 5.2330 4.9279 4.3901 43 1 3.7385 3.3411 0.6790 44 1 2.4772 3.8810 1.8702 45 1 -0.3301 -1.5300 -1.0340 46 1 -0.4945 -5.7654 -0.5610 47 1 2.9041 -6.2398 0.0783 48 1 2.5073 -6.9040 2.3383 49 1 1.4530 -8.8293 0.4987 50 1 -0.4975 -7.3958 0.7417 51 1 2.9792 -3.6380 0.6971 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15093190_12335870.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:14:13 Heat of formation + Delta-G solvation = -25.630238 kcal Electronic energy + Delta-G solvation = -31659.283869 eV Core-core repulsion = 27380.866976 eV Total energy + Delta-G solvation = -4278.416893 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.108 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -41.89515 -40.88865 -39.93044 -38.40138 -37.84964 -36.66727 -34.01140 -33.68311 -33.21281 -30.49425 -29.76763 -28.44873 -28.40156 -27.92815 -26.86369 -26.57429 -25.07466 -23.36356 -22.60496 -21.05071 -20.57504 -20.51842 -18.66592 -18.25652 -18.04928 -17.80555 -17.53485 -16.99442 -16.62538 -16.16499 -15.97551 -15.86448 -15.65942 -15.37076 -15.09510 -14.79122 -14.66462 -14.46367 -14.31789 -14.21203 -14.03484 -13.92084 -13.52639 -13.43207 -13.38329 -13.24792 -12.96674 -12.90889 -12.80112 -12.71701 -12.67297 -12.26742 -12.11560 -12.05393 -12.00490 -11.85856 -11.76912 -11.46552 -11.37917 -11.24451 -11.05915 -10.59388 -10.37455 -10.20602 -9.91266 -9.70750 -4.99336 -0.48453 -0.15756 0.42568 1.18524 1.51401 1.53874 1.82005 1.88329 2.39739 2.72884 3.14509 3.22849 3.53221 3.57765 3.64536 3.71218 3.78776 3.81383 3.87356 3.88454 3.94037 3.96970 4.06198 4.10489 4.13606 4.20537 4.30464 4.37571 4.46475 4.48646 4.53704 4.56524 4.61047 4.70954 4.73785 4.75686 4.80129 4.81205 4.85036 4.86070 4.88307 4.90696 4.93035 5.02592 5.07190 5.08455 5.19627 5.27807 5.31196 5.33662 5.38811 5.51212 6.19696 6.41596 6.50429 6.97722 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.604 5.604 3 C 0.129 3.871 4 C -0.116 4.116 5 H 0.104 0.896 6 C -0.137 4.137 7 C 0.057 3.943 8 H 0.096 0.904 9 O -0.383 6.383 10 C 0.097 3.903 11 C -0.172 4.172 12 C -0.139 4.139 13 C -0.174 4.174 14 C -0.118 4.118 15 C 0.554 3.446 16 O -0.562 6.562 17 C -0.137 4.137 18 C -0.067 4.067 19 C -0.101 4.101 20 Br -0.026 7.026 21 C -0.066 4.066 22 C -0.080 4.080 23 C -0.088 4.088 24 O -0.557 6.557 25 Si 0.759 3.241 26 C -0.032 4.032 27 H 0.089 0.911 28 H 0.084 0.916 29 H 0.097 0.903 30 H 0.113 0.887 31 H 0.066 0.934 32 H 0.045 0.955 33 H 0.067 0.933 34 H 0.049 0.951 35 H 0.078 0.922 36 H 0.055 0.945 37 H 0.061 0.939 38 H 0.085 0.915 39 H 0.053 0.947 40 H 0.061 0.939 41 H 0.078 0.922 42 H 0.063 0.937 43 H 0.086 0.914 44 H 0.091 0.909 45 H 0.184 0.816 46 H 0.152 0.848 47 H 0.098 0.902 48 H 0.398 0.602 49 H -0.279 1.279 50 H -0.287 1.287 51 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.453 0.802 -0.988 4.631 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 N -0.335 5.335 3 C 0.007 3.993 4 C -0.135 4.135 5 H 0.122 0.878 6 C -0.175 4.175 7 C -0.001 4.001 8 H 0.114 0.886 9 O -0.303 6.303 10 C 0.059 3.941 11 C -0.230 4.230 12 C -0.196 4.196 13 C -0.231 4.231 14 C -0.157 4.157 15 C 0.343 3.657 16 O -0.442 6.442 17 C -0.141 4.141 18 C -0.087 4.087 19 C -0.180 4.180 20 Br 0.060 6.940 21 C -0.085 4.085 22 C -0.081 4.081 23 C -0.196 4.196 24 O -0.367 6.367 25 Si 0.662 3.338 26 C -0.052 4.052 27 H 0.107 0.893 28 H 0.103 0.897 29 H 0.115 0.885 30 H 0.131 0.869 31 H 0.084 0.916 32 H 0.064 0.936 33 H 0.086 0.914 34 H 0.069 0.931 35 H 0.097 0.903 36 H 0.074 0.926 37 H 0.080 0.920 38 H 0.104 0.896 39 H 0.072 0.928 40 H 0.080 0.920 41 H 0.097 0.903 42 H 0.082 0.918 43 H 0.104 0.896 44 H 0.110 0.890 45 H 0.201 0.799 46 H 0.170 0.830 47 H 0.116 0.884 48 H 0.249 0.751 49 H -0.205 1.205 50 H -0.214 1.214 51 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -5.105 0.779 -1.172 5.296 hybrid contribution 1.226 -0.560 1.622 2.109 sum -3.879 0.219 0.449 3.911 Atomic orbital electron populations 1.22754 0.77595 1.05116 1.03635 1.47776 1.08196 1.05264 1.72286 1.21570 0.97545 0.84195 0.96007 1.22678 0.97303 0.96371 0.97194 0.87790 1.23396 0.97965 0.96432 0.99746 1.23781 0.82385 0.94880 0.99037 0.88616 1.88014 1.24967 1.88322 1.29028 1.21678 0.94357 0.94738 0.83374 1.22432 1.02193 0.96748 1.01618 1.21790 0.92936 1.01742 1.03118 1.22422 1.00741 0.99336 1.00621 1.23146 0.97541 0.96461 0.98504 1.18429 0.86658 0.84219 0.76391 1.90793 1.15346 1.87411 1.50650 1.19890 0.95666 0.93579 1.04989 1.22496 0.92262 0.99208 0.94686 1.21749 0.94817 0.95670 1.05808 1.96834 1.16115 1.99239 1.81804 1.21359 0.93706 0.98120 0.95315 1.19327 0.94204 0.94607 0.99985 1.25041 1.07566 1.02606 0.84416 1.86537 1.85259 1.45033 1.19879 0.94166 0.75806 0.73314 0.90476 1.21220 0.99539 0.90696 0.93701 0.89334 0.89734 0.88451 0.86931 0.91595 0.93594 0.91407 0.93139 0.90332 0.92632 0.91958 0.89606 0.92780 0.91972 0.90346 0.91816 0.89567 0.89049 0.79905 0.83038 0.88394 0.75110 1.20517 1.21418 0.85449 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.37 8.65 127.77 1.11 0.74 16 2 N -0.60 -0.05 2.87 -850.19 -2.44 -2.50 16 3 C 0.13 -0.07 5.23 86.38 0.45 0.38 16 4 C -0.12 0.00 3.96 -10.27 -0.04 -0.04 16 5 H 0.10 -0.24 8.14 -2.39 -0.02 -0.26 16 6 C -0.14 -0.88 6.56 31.12 0.20 -0.68 16 7 C 0.06 0.21 2.82 31.12 0.09 0.30 16 8 H 0.10 0.14 5.54 -2.39 -0.01 0.13 16 9 O -0.38 -3.00 10.00 -148.98 -1.49 -4.49 16 10 C 0.10 0.37 1.11 -10.79 -0.01 0.36 16 11 C -0.17 -0.58 8.38 71.98 0.60 0.02 16 12 C -0.14 -0.35 8.84 71.98 0.64 0.29 16 13 C -0.17 -0.06 8.38 71.98 0.60 0.54 16 14 C -0.12 0.02 7.47 31.12 0.23 0.25 16 15 C 0.55 3.78 7.51 86.78 0.65 4.43 16 16 O -0.56 -8.16 14.87 -3.90 -0.06 -8.22 16 17 C -0.14 -0.57 5.57 -20.09 -0.11 -0.68 16 18 C -0.07 0.05 7.35 22.54 0.17 0.21 16 19 C -0.10 0.01 6.22 22.27 0.14 0.15 16 20 Br -0.03 0.04 33.69 -20.37 -0.69 -0.65 16 21 C -0.07 -0.04 8.40 22.34 0.19 0.15 16 22 C -0.08 -0.21 5.38 -19.91 -0.11 -0.32 16 23 C -0.09 0.03 2.79 71.24 0.20 0.23 16 24 O -0.56 -1.37 12.81 -148.98 -1.91 -3.28 16 25 Si 0.76 -1.99 29.84 68.60 2.05 0.05 16 26 C -0.03 -0.18 9.22 22.53 0.21 0.02 16 27 H 0.09 -0.98 7.03 -2.39 -0.02 -0.99 16 28 H 0.08 -0.54 5.21 -2.39 -0.01 -0.56 16 29 H 0.10 -1.05 8.10 -2.39 -0.02 -1.07 16 30 H 0.11 -0.72 8.07 -2.39 -0.02 -0.74 16 31 H 0.07 0.31 7.26 -2.39 -0.02 0.29 16 32 H 0.05 0.40 8.14 -2.39 -0.02 0.38 16 33 H 0.07 0.85 7.53 -2.38 -0.02 0.83 16 34 H 0.05 0.32 8.14 -2.39 -0.02 0.30 16 35 H 0.08 0.03 8.14 -2.39 -0.02 0.01 16 36 H 0.05 0.20 7.02 -2.38 -0.02 0.18 16 37 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 38 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 39 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 40 H 0.06 -0.02 6.24 -2.39 -0.01 -0.04 16 41 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 42 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 43 H 0.09 0.13 8.10 -2.38 -0.02 0.11 16 44 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 45 H 0.18 -1.04 4.05 -2.91 -0.01 -1.06 16 46 H 0.15 -0.35 4.85 -2.91 -0.01 -0.36 16 47 H 0.10 -0.36 7.96 -2.39 -0.02 -0.38 16 48 H 0.40 -2.26 8.74 -74.05 -0.65 -2.91 16 49 H -0.28 -0.34 7.11 99.48 0.71 0.36 16 50 H -0.29 -1.00 7.05 99.48 0.70 -0.30 16 51 H 0.13 1.06 7.79 -2.91 -0.02 1.04 16 Total: 0.00 -18.95 417.01 1.00 -17.95 By element: Atomic # 1 Polarization: -5.56 SS G_CDS: 0.33 Total: -5.22 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: 5.20 Total: 6.35 kcal Atomic # 7 Polarization: -0.05 SS G_CDS: -2.44 Total: -2.50 kcal Atomic # 8 Polarization: -12.53 SS G_CDS: -3.46 Total: -15.99 kcal Atomic # 14 Polarization: -1.99 SS G_CDS: 2.05 Total: 0.05 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -0.69 Total: -0.65 kcal Total: -18.95 1.00 -17.95 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15093190_12335870.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.676 kcal (2) G-P(sol) polarization free energy of solvation -18.951 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.627 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.997 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.954 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.630 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds