Wall clock time and date at job start Tue Mar 9 2021 13:16:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.46507 * 119.99636 * 2 1 4 4 C 1.52991 * 109.47390 * 89.99672 * 3 2 1 5 5 H 1.08999 * 112.85247 * 43.80165 * 4 3 2 6 6 C 1.53786 * 113.61279 * 174.99773 * 4 3 2 7 7 C 1.53786 * 87.08171 * 139.98014 * 6 4 3 8 8 H 1.08995 * 113.61663 * 89.19751 * 7 6 4 9 9 O 1.42891 * 113.61602 * 220.02046 * 7 6 4 10 10 C 1.42903 * 114.00185 * 209.99654 * 9 7 6 11 11 C 1.53003 * 109.46558 * 60.00242 * 10 9 7 12 12 C 1.53003 * 109.47336 * 179.97438 * 10 9 7 13 13 C 1.52990 * 109.47135 * 299.99909 * 10 9 7 14 14 C 1.53782 * 113.61477 * 272.49356 * 4 3 2 15 15 C 1.34775 * 120.00257 * 179.97438 * 2 1 3 16 16 O 1.21610 * 119.99830 * 181.53848 * 15 2 1 17 17 C 1.47379 * 119.99998 * 1.53774 * 15 2 1 18 18 C 1.36412 * 127.19083 * 339.47418 * 17 15 2 19 19 O 1.33653 * 108.39576 * 179.83223 * 18 17 15 20 20 C 1.34215 * 110.90679 * 0.44617 * 19 18 17 21 21 C 1.50703 * 125.43454 * 179.72420 * 20 19 18 22 22 O 1.42903 * 109.47005 * 244.99862 * 21 20 19 23 23 Si 1.86298 * 109.47250 * 5.00072 * 21 20 19 24 24 C 1.34178 * 109.12281 * 359.72733 * 20 19 18 25 25 H 1.08996 * 109.47219 * 263.75764 * 1 2 3 26 26 H 1.08999 * 109.46542 * 143.75720 * 1 2 3 27 27 H 1.09002 * 109.47458 * 23.75978 * 1 2 3 28 28 H 1.09007 * 109.46578 * 209.99872 * 3 2 1 29 29 H 1.08999 * 109.47136 * 329.98749 * 3 2 1 30 30 H 1.09001 * 113.61261 * 254.52454 * 6 4 3 31 31 H 1.08997 * 113.61522 * 25.43291 * 6 4 3 32 32 H 1.08993 * 109.47594 * 60.00164 * 11 10 9 33 33 H 1.09008 * 109.46834 * 180.02562 * 11 10 9 34 34 H 1.08999 * 109.46769 * 299.99352 * 11 10 9 35 35 H 1.08996 * 109.47096 * 59.99790 * 12 10 9 36 36 H 1.08995 * 109.47222 * 180.02562 * 12 10 9 37 37 H 1.09003 * 109.46959 * 300.00586 * 12 10 9 38 38 H 1.09005 * 109.47144 * 59.99839 * 13 10 9 39 39 H 1.09008 * 109.47063 * 179.97438 * 13 10 9 40 40 H 1.09000 * 109.47729 * 299.99769 * 13 10 9 41 41 H 1.09005 * 113.61508 * 334.57088 * 14 4 3 42 42 H 1.09003 * 113.61395 * 105.47187 * 14 4 3 43 43 H 1.08005 * 125.80296 * 359.97438 * 18 17 15 44 44 H 1.08995 * 109.46732 * 125.00210 * 21 20 19 45 45 H 0.96695 * 113.99941 * 179.97438 * 22 21 20 46 46 H 1.48500 * 110.00023 * 299.99941 * 23 21 20 47 47 H 1.48497 * 110.00043 * 61.32231 * 23 21 20 48 48 H 1.07996 * 127.01732 * 179.97438 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.4524 1.7106 1.4424 5 1 2.7833 0.8933 2.0832 6 6 3.3231 2.9732 1.5552 7 6 2.3900 3.4196 2.6932 8 1 2.7038 3.0713 3.6772 9 8 2.0859 4.8156 2.6698 10 6 1.8371 5.3780 3.9597 11 6 3.0752 5.2005 4.8408 12 6 1.5246 6.8688 3.8145 13 6 0.6457 4.6673 4.6047 14 6 1.3070 2.5422 2.0435 15 6 2.1389 -1.1672 0.0005 16 8 3.3547 -1.1672 0.0288 17 6 1.4025 -2.4433 -0.0332 18 6 0.1004 -2.6534 0.3150 19 8 -0.1802 -3.9480 0.1372 20 6 0.8957 -4.6142 -0.3101 21 6 0.9457 -6.0893 -0.6143 22 8 1.8470 -6.7317 0.2897 23 14 -0.7562 -6.8217 -0.4196 24 6 1.9194 -3.7571 -0.4431 25 1 -0.3633 -0.1117 1.0215 26 1 -0.3632 -0.8288 -0.6076 27 1 -0.3634 0.9406 -0.4140 28 1 3.1499 1.1384 -0.5139 29 1 1.6084 2.0284 -0.5140 30 1 4.3437 2.7721 1.8809 31 1 3.2771 3.6153 0.6756 32 1 3.9240 5.7068 4.3812 33 1 2.8853 5.6291 5.8249 34 1 3.2982 4.1385 4.9443 35 1 0.6428 6.9957 3.1865 36 1 1.3353 7.2978 4.7984 37 1 2.3737 7.3749 3.3550 38 1 0.8687 3.6053 4.7083 39 1 0.4562 5.0960 5.5889 40 1 -0.2364 4.7938 3.9770 41 1 0.7098 3.0665 1.2974 42 1 0.6999 1.9932 2.7634 43 1 -0.5876 -1.9009 0.6714 44 1 1.2903 -6.2377 -1.6376 45 1 1.9289 -7.6853 0.1521 46 1 -1.2373 -6.6258 0.9715 47 1 -1.6959 -6.1842 -1.3766 48 1 2.9191 -3.9859 -0.7816 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15093190_13456056.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:16:04 Heat of formation + Delta-G solvation = -53.722827 kcal Electronic energy + Delta-G solvation = -27982.383206 eV Core-core repulsion = 24007.647697 eV Total energy + Delta-G solvation = -3974.735509 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.182 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -43.75879 -41.21111 -40.32501 -38.38676 -37.96570 -36.42887 -34.11988 -33.70976 -32.16340 -29.73862 -28.44760 -28.39692 -27.82785 -26.68684 -26.52004 -24.72085 -23.12150 -22.01945 -20.95735 -20.62467 -20.21855 -18.75720 -18.35954 -17.78280 -17.54293 -17.36309 -16.99641 -16.77563 -16.08259 -15.92837 -15.89046 -15.72292 -15.42082 -14.62653 -14.54944 -14.47842 -14.33321 -14.14489 -14.08995 -13.83542 -13.53290 -13.46583 -13.40198 -13.29037 -13.12256 -12.89807 -12.81301 -12.70152 -12.69787 -12.17964 -12.09779 -12.02752 -11.81887 -11.36511 -11.23347 -11.00118 -10.78806 -10.54969 -10.34123 -9.77284 -9.73751 -5.13544 0.25207 0.88620 1.10215 1.55323 1.63905 1.87566 1.97054 2.25930 2.73133 3.21911 3.43026 3.54311 3.55734 3.62574 3.75453 3.79264 3.81686 3.86553 3.90316 3.97463 4.06488 4.09640 4.14305 4.23859 4.26957 4.36007 4.47517 4.54290 4.58339 4.60194 4.67091 4.69810 4.73954 4.78233 4.79830 4.81530 4.85182 4.87654 4.90058 5.00846 5.08634 5.13401 5.23284 5.27722 5.32034 5.34340 5.52729 5.86013 6.26732 6.42712 6.44534 7.17024 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.610 5.610 3 C 0.130 3.870 4 C -0.125 4.125 5 H 0.094 0.906 6 C -0.128 4.128 7 C 0.062 3.938 8 H 0.089 0.911 9 O -0.362 6.362 10 C 0.105 3.895 11 C -0.179 4.179 12 C -0.139 4.139 13 C -0.175 4.175 14 C -0.148 4.148 15 C 0.587 3.413 16 O -0.527 6.527 17 C -0.233 4.233 18 C 0.016 3.984 19 O -0.175 6.175 20 C -0.016 4.016 21 C -0.036 4.036 22 O -0.543 6.543 23 Si 0.712 3.288 24 C -0.119 4.119 25 H 0.061 0.939 26 H 0.078 0.922 27 H 0.082 0.918 28 H 0.089 0.911 29 H 0.083 0.917 30 H 0.074 0.926 31 H 0.093 0.907 32 H 0.065 0.935 33 H 0.067 0.933 34 H 0.058 0.942 35 H 0.063 0.937 36 H 0.070 0.930 37 H 0.063 0.937 38 H 0.057 0.943 39 H 0.065 0.935 40 H 0.064 0.936 41 H 0.090 0.910 42 H 0.065 0.935 43 H 0.224 0.776 44 H 0.095 0.905 45 H 0.391 0.609 46 H -0.249 1.249 47 H -0.253 1.253 48 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.446 -1.983 -0.596 4.904 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.343 5.343 3 C 0.008 3.992 4 C -0.144 4.144 5 H 0.112 0.888 6 C -0.166 4.166 7 C 0.004 3.996 8 H 0.107 0.893 9 O -0.281 6.281 10 C 0.066 3.934 11 C -0.237 4.237 12 C -0.196 4.196 13 C -0.233 4.233 14 C -0.186 4.186 15 C 0.376 3.624 16 O -0.404 6.404 17 C -0.237 4.237 18 C -0.053 4.053 19 O -0.072 6.072 20 C -0.064 4.064 21 C -0.146 4.146 22 O -0.350 6.350 23 Si 0.611 3.389 24 C -0.138 4.138 25 H 0.080 0.920 26 H 0.096 0.904 27 H 0.101 0.899 28 H 0.107 0.893 29 H 0.101 0.899 30 H 0.093 0.907 31 H 0.111 0.889 32 H 0.084 0.916 33 H 0.086 0.914 34 H 0.077 0.923 35 H 0.082 0.918 36 H 0.089 0.911 37 H 0.083 0.917 38 H 0.076 0.924 39 H 0.084 0.916 40 H 0.083 0.917 41 H 0.108 0.892 42 H 0.084 0.916 43 H 0.240 0.760 44 H 0.113 0.887 45 H 0.240 0.760 46 H -0.173 1.173 47 H -0.177 1.177 48 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -4.848 -1.244 -0.294 5.014 hybrid contribution 0.431 0.501 0.276 0.717 sum -4.417 -0.743 -0.017 4.479 Atomic orbital electron populations 1.22297 0.79903 1.04292 1.01715 1.47654 1.06857 1.05889 1.73938 1.21524 0.97971 0.83625 0.96047 1.22719 0.97626 0.96834 0.97251 0.88772 1.23215 0.98375 0.95712 0.99271 1.23593 0.96032 0.81512 0.98441 0.89309 1.88033 1.89647 1.22301 1.28124 1.21527 0.93848 0.94349 0.83708 1.22473 0.98468 1.02328 1.00404 1.21766 1.02607 0.92745 1.02462 1.22459 0.98707 1.00743 1.01364 1.23620 0.96961 0.97408 1.00613 1.17284 0.86664 0.82274 0.76162 1.90816 1.13142 1.87025 1.49405 1.21481 0.94753 0.95270 1.12211 1.25313 0.96595 0.83328 1.00090 1.83728 1.37660 1.20261 1.65538 1.21179 0.85758 0.93818 1.05618 1.23827 1.07448 0.87653 0.95662 1.86480 1.65385 1.26050 1.57124 0.95154 0.73368 0.88643 0.81768 1.22485 0.99849 0.89216 1.02290 0.92041 0.90377 0.89902 0.89294 0.89865 0.90742 0.88877 0.91568 0.91393 0.92267 0.91797 0.91103 0.91748 0.92392 0.91575 0.91734 0.89193 0.91591 0.76015 0.88709 0.76021 1.17346 1.17717 0.81917 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.17 8.85 59.85 0.53 0.36 16 2 N -0.61 -0.51 2.87 -182.87 -0.53 -1.04 16 3 C 0.13 0.05 5.27 -4.04 -0.02 0.03 16 4 C -0.12 -0.04 3.96 -89.81 -0.36 -0.40 16 5 H 0.09 0.19 8.14 -51.93 -0.42 -0.23 16 6 C -0.13 -0.06 7.47 -25.91 -0.19 -0.26 16 7 C 0.06 0.04 2.82 -25.91 -0.07 -0.04 16 8 H 0.09 0.03 5.54 -51.93 -0.29 -0.26 16 9 O -0.36 -0.74 10.00 -35.23 -0.35 -1.09 16 10 C 0.10 0.06 1.11 -90.62 -0.10 -0.04 16 11 C -0.18 0.00 8.38 37.16 0.31 0.32 16 12 C -0.14 0.00 8.84 37.16 0.33 0.33 16 13 C -0.18 0.05 8.38 37.15 0.31 0.37 16 14 C -0.15 0.07 7.46 -25.92 -0.19 -0.13 16 15 C 0.59 2.46 7.67 -12.54 -0.10 2.37 16 16 O -0.53 -4.20 16.62 5.27 0.09 -4.12 16 17 C -0.23 -0.76 5.96 -103.28 -0.62 -1.37 16 18 C 0.02 0.01 9.89 30.07 0.30 0.31 16 19 O -0.18 -0.49 8.90 7.65 0.07 -0.42 16 20 C -0.02 -0.05 6.22 -35.74 -0.22 -0.27 16 21 C -0.04 0.01 2.96 36.01 0.11 0.12 16 22 O -0.54 0.01 12.86 -35.23 -0.45 -0.44 16 23 Si 0.71 -0.98 32.09 -169.99 -5.46 -6.44 16 24 C -0.12 -0.45 10.96 -37.46 -0.41 -0.87 16 25 H 0.06 -0.25 7.35 -51.93 -0.38 -0.63 16 26 H 0.08 -0.25 5.40 -51.93 -0.28 -0.53 16 27 H 0.08 -0.33 7.82 -51.93 -0.41 -0.74 16 28 H 0.09 0.19 7.44 -51.93 -0.39 -0.20 16 29 H 0.08 -0.12 7.56 -51.93 -0.39 -0.51 16 30 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 31 H 0.09 0.05 8.10 -51.93 -0.42 -0.37 16 32 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.07 -0.06 8.14 -51.92 -0.42 -0.48 16 34 H 0.06 -0.01 6.24 -51.93 -0.32 -0.33 16 35 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 36 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 37 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 38 H 0.06 -0.02 7.02 -51.93 -0.36 -0.38 16 39 H 0.07 -0.07 8.14 -51.92 -0.42 -0.49 16 40 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 41 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 42 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 43 H 0.22 -0.70 5.03 -52.48 -0.26 -0.96 16 44 H 0.10 -0.25 7.96 -51.93 -0.41 -0.67 16 45 H 0.39 -2.20 8.74 45.56 0.40 -1.80 16 46 H -0.25 -0.60 7.11 56.52 0.40 -0.20 16 47 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 48 H 0.16 0.57 8.06 -52.49 -0.42 0.15 16 LS Contribution 385.36 15.07 5.81 5.81 Total: 0.00 -9.88 385.36 -9.00 -18.88 By element: Atomic # 1 Polarization: -4.20 SS G_CDS: -7.78 Total: -11.98 kcal Atomic # 6 Polarization: 1.23 SS G_CDS: -0.40 Total: 0.84 kcal Atomic # 7 Polarization: -0.51 SS G_CDS: -0.53 Total: -1.04 kcal Atomic # 8 Polarization: -5.42 SS G_CDS: -0.65 Total: -6.07 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.46 Total: -6.44 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -9.88 -9.00 -18.88 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15093190_13456056.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.841 kcal (2) G-P(sol) polarization free energy of solvation -9.879 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.720 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.003 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.882 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.723 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds