Wall clock time and date at job start Tue Mar 9 2021 13:16:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.46504 * 119.99758 * 2 1 4 4 C 1.53005 * 109.46692 * 270.00143 * 3 2 1 5 5 H 1.08997 * 112.84932 * 316.19501 * 4 3 2 6 6 C 1.53776 * 113.61552 * 87.50743 * 4 3 2 7 7 C 1.53776 * 87.08160 * 139.97677 * 6 4 3 8 8 H 1.09010 * 113.69327 * 89.12358 * 7 6 4 9 9 O 1.42901 * 113.61526 * 220.01639 * 7 6 4 10 10 C 1.42905 * 113.99728 * 247.49853 * 9 7 6 11 11 C 1.52993 * 109.47355 * 60.00079 * 10 9 7 12 12 C 1.53004 * 109.46786 * 179.97438 * 10 9 7 13 13 C 1.52998 * 109.47026 * 299.99400 * 10 9 7 14 14 C 1.53781 * 87.08230 * 334.56468 * 7 6 4 15 15 C 1.34768 * 120.00184 * 179.97438 * 2 1 3 16 16 O 1.21275 * 120.00222 * 179.97438 * 15 2 1 17 17 C 1.50704 * 120.00125 * 359.97438 * 15 2 1 18 18 O 1.42898 * 109.47398 * 180.02562 * 17 15 2 19 19 C 1.35897 * 116.99943 * 180.02562 * 18 17 15 20 20 C 1.38718 * 120.05500 * 180.23524 * 19 18 17 21 21 C 1.50693 * 120.02731 * 0.02562 * 20 19 18 22 22 O 1.42908 * 109.47075 * 75.25779 * 21 20 19 23 23 Si 1.86301 * 109.47314 * 195.25508 * 21 20 19 24 24 C 1.38163 * 119.94360 * 180.27446 * 20 19 18 25 25 C 1.38251 * 120.05527 * 359.46174 * 24 20 19 26 26 C 1.38281 * 120.11067 * 0.30253 * 25 24 20 27 27 C 1.38126 * 120.05739 * 359.95635 * 26 25 24 28 28 H 1.09001 * 109.47143 * 270.00280 * 1 2 3 29 29 H 1.09001 * 109.47006 * 30.00404 * 1 2 3 30 30 H 1.09006 * 109.47014 * 150.00162 * 1 2 3 31 31 H 1.09000 * 109.47286 * 29.99603 * 3 2 1 32 32 H 1.08998 * 109.46604 * 150.00030 * 3 2 1 33 33 H 1.09005 * 113.61066 * 254.52232 * 6 4 3 34 34 H 1.08990 * 113.61717 * 25.42770 * 6 4 3 35 35 H 1.09000 * 109.47046 * 59.99531 * 11 10 9 36 36 H 1.09003 * 109.47292 * 179.97438 * 11 10 9 37 37 H 1.09002 * 109.46902 * 299.99765 * 11 10 9 38 38 H 1.09003 * 109.47211 * 59.99612 * 12 10 9 39 39 H 1.08994 * 109.47485 * 179.97438 * 12 10 9 40 40 H 1.09000 * 109.47150 * 300.00184 * 12 10 9 41 41 H 1.09003 * 109.47223 * 60.00878 * 13 10 9 42 42 H 1.09003 * 109.46836 * 180.02562 * 13 10 9 43 43 H 1.08999 * 109.47557 * 300.00222 * 13 10 9 44 44 H 1.08992 * 113.61497 * 270.88456 * 14 7 6 45 45 H 1.09004 * 113.61600 * 139.98098 * 14 7 6 46 46 H 1.09008 * 109.47117 * 60.00116 * 17 15 2 47 47 H 1.09001 * 109.47021 * 300.00431 * 17 15 2 48 48 H 1.09004 * 109.47616 * 315.25677 * 21 20 19 49 49 H 0.96699 * 113.99498 * 59.99849 * 22 21 20 50 50 H 1.48507 * 109.99694 * 58.68218 * 23 21 20 51 51 H 1.48502 * 110.00392 * 180.02562 * 23 21 20 52 52 H 1.08002 * 119.97507 * 179.74750 * 24 20 19 53 53 H 1.07998 * 119.94295 * 180.27771 * 25 24 20 54 54 H 1.08005 * 119.97244 * 179.97438 * 26 25 24 55 55 H 1.07998 * 120.02909 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.4524 1.7104 -1.4426 5 1 2.7834 0.8931 -2.0832 6 6 1.3071 2.5420 -2.0438 7 6 2.3901 3.4192 -2.6935 8 1 2.7040 3.0707 -3.6775 9 8 2.0860 4.8153 -2.6702 10 6 1.8373 5.3775 -3.9603 11 6 0.6460 4.6667 -4.6054 12 6 1.5237 6.8680 -3.8152 13 6 3.0755 5.1998 -4.8414 14 6 3.3231 2.9730 -1.5554 15 6 2.1389 -1.1671 0.0005 16 8 3.3517 -1.1671 0.0001 17 6 1.3855 -2.4723 0.0017 18 8 2.3141 -3.5584 0.0027 19 6 1.7946 -4.8142 0.0032 20 6 2.6386 -5.9151 0.0091 21 6 4.1328 -5.7198 0.0155 22 8 4.5548 -5.3156 1.3196 23 14 4.9703 -7.3204 -0.4399 24 6 2.1080 -7.1908 0.0040 25 6 0.7373 -7.3706 0.0042 26 6 -0.1062 -6.2748 0.0033 27 6 0.4193 -4.9974 0.0030 28 1 -0.3633 0.0001 1.0277 29 1 -0.3633 0.8900 -0.5139 30 1 -0.3633 -0.8901 -0.5138 31 1 1.6084 2.0284 0.5138 32 1 3.1499 1.1384 0.5138 33 1 0.7001 1.9928 -2.7637 34 1 0.7100 3.0663 -1.2978 35 1 -0.2361 4.7933 -3.9776 36 1 0.4560 5.0958 -5.5892 37 1 0.8690 3.6047 -4.7087 38 1 2.3722 7.3748 -3.3553 39 1 1.3345 7.2970 -4.7991 40 1 0.6415 6.9942 -3.1875 41 1 3.2985 4.1379 -4.9448 42 1 2.8859 5.6291 -5.8252 43 1 3.9242 5.7063 -4.3818 44 1 3.2772 3.6151 -0.6760 45 1 4.3438 2.7718 -1.8810 46 1 0.7584 -2.5307 -0.8881 47 1 0.7591 -2.5294 0.8919 48 1 4.4018 -4.9503 -0.7082 49 1 4.3475 -5.9542 2.0155 50 1 4.5155 -7.7680 -1.7809 51 1 6.4445 -7.1413 -0.4366 52 1 2.7647 -8.0483 0.0044 53 1 0.3245 -8.3686 0.0047 54 1 -1.1767 -6.4179 0.0030 55 1 -0.2399 -4.1419 0.0027 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15093190_2989392.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:16:22 Heat of formation + Delta-G solvation = -87.049784 kcal Electronic energy + Delta-G solvation = -33385.989280 eV Core-core repulsion = 28970.507227 eV Total energy + Delta-G solvation = -4415.482053 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.213 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -41.75777 -41.15423 -40.48422 -38.75043 -38.28747 -37.48916 -36.47315 -33.90211 -32.75124 -31.48985 -30.51163 -28.83689 -28.41759 -28.31571 -27.11092 -26.68082 -26.59349 -24.13784 -23.14423 -22.58463 -21.02135 -20.65110 -20.30445 -19.54792 -18.19702 -17.98583 -17.82107 -17.62116 -17.29821 -16.84592 -16.73346 -16.50534 -16.04117 -15.91517 -15.82718 -15.56764 -15.19528 -15.00740 -14.69519 -14.60502 -14.54467 -14.22233 -14.10538 -13.78099 -13.61186 -13.53714 -13.48926 -13.36474 -13.28393 -13.22251 -13.01538 -12.89890 -12.82526 -12.69365 -12.37385 -12.23774 -12.20441 -12.10413 -12.07583 -11.85197 -11.76887 -11.40545 -11.26391 -10.96731 -10.39393 -10.38998 -9.96010 -9.79851 -9.22169 -5.06683 0.24473 0.41803 1.27480 1.35363 1.40867 1.61079 1.94319 2.43243 2.70127 2.71501 3.28429 3.46876 3.54381 3.57319 3.73492 3.74658 3.76977 3.80934 3.88158 3.93411 3.95070 3.96853 4.07265 4.11178 4.12416 4.19640 4.26401 4.30948 4.36397 4.52022 4.52762 4.57332 4.57532 4.63861 4.65079 4.72562 4.75377 4.77227 4.77523 4.83118 4.86775 4.89119 4.90955 4.97993 4.98152 5.08725 5.10215 5.28091 5.28947 5.29728 5.32782 5.38637 5.45774 5.53522 5.77173 6.12746 6.34741 6.38623 6.80676 6.96037 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.604 5.604 3 C 0.129 3.871 4 C -0.117 4.117 5 H 0.074 0.926 6 C -0.133 4.133 7 C 0.060 3.940 8 H 0.089 0.911 9 O -0.378 6.378 10 C 0.098 3.902 11 C -0.171 4.171 12 C -0.138 4.138 13 C -0.178 4.178 14 C -0.132 4.132 15 C 0.506 3.494 16 O -0.571 6.571 17 C 0.041 3.959 18 O -0.316 6.316 19 C 0.123 3.877 20 C -0.172 4.172 21 C -0.075 4.075 22 O -0.557 6.557 23 Si 0.797 3.203 24 C -0.078 4.078 25 C -0.153 4.153 26 C -0.075 4.075 27 C -0.214 4.214 28 H 0.077 0.923 29 H 0.092 0.908 30 H 0.090 0.910 31 H 0.107 0.893 32 H 0.062 0.938 33 H 0.075 0.925 34 H 0.097 0.903 35 H 0.063 0.937 36 H 0.074 0.926 37 H 0.057 0.943 38 H 0.056 0.944 39 H 0.083 0.917 40 H 0.061 0.939 41 H 0.057 0.943 42 H 0.078 0.922 43 H 0.056 0.944 44 H 0.093 0.907 45 H 0.064 0.936 46 H 0.119 0.881 47 H 0.119 0.881 48 H 0.077 0.923 49 H 0.391 0.609 50 H -0.281 1.281 51 H -0.304 1.304 52 H 0.158 0.842 53 H 0.156 0.844 54 H 0.155 0.845 55 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.323 -2.216 -0.300 10.563 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.338 5.338 3 C 0.007 3.993 4 C -0.137 4.137 5 H 0.092 0.908 6 C -0.170 4.170 7 C 0.002 3.998 8 H 0.107 0.893 9 O -0.298 6.298 10 C 0.059 3.941 11 C -0.229 4.229 12 C -0.196 4.196 13 C -0.236 4.236 14 C -0.170 4.170 15 C 0.294 3.706 16 O -0.450 6.450 17 C -0.036 4.036 18 O -0.229 6.229 19 C 0.078 3.922 20 C -0.173 4.173 21 C -0.183 4.183 22 O -0.365 6.365 23 Si 0.702 3.298 24 C -0.096 4.096 25 C -0.171 4.171 26 C -0.093 4.093 27 C -0.232 4.232 28 H 0.096 0.904 29 H 0.110 0.890 30 H 0.108 0.892 31 H 0.125 0.875 32 H 0.080 0.920 33 H 0.094 0.906 34 H 0.116 0.884 35 H 0.082 0.918 36 H 0.093 0.907 37 H 0.076 0.924 38 H 0.075 0.925 39 H 0.102 0.898 40 H 0.080 0.920 41 H 0.076 0.924 42 H 0.097 0.903 43 H 0.076 0.924 44 H 0.112 0.888 45 H 0.083 0.917 46 H 0.136 0.864 47 H 0.137 0.863 48 H 0.095 0.905 49 H 0.240 0.760 50 H -0.207 1.207 51 H -0.232 1.232 52 H 0.175 0.825 53 H 0.173 0.827 54 H 0.172 0.828 55 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -8.800 -1.898 -1.011 9.059 hybrid contribution 0.151 0.881 -0.527 1.038 sum -8.649 -1.017 -1.538 8.843 Atomic orbital electron populations 1.22255 0.76369 1.05389 1.03912 1.47832 1.08755 1.04612 1.72598 1.21501 0.97459 0.84410 0.95940 1.22546 0.98173 0.96069 0.96891 0.90764 1.23525 0.96368 0.96582 1.00569 1.23633 0.96479 0.81324 0.98344 0.89292 1.88012 1.89809 1.22863 1.29132 1.21677 0.94385 0.94701 0.83325 1.22420 0.98096 1.00680 1.01683 1.21786 1.02165 0.92466 1.03140 1.22463 0.98061 1.02228 1.00816 1.23238 0.98157 0.96047 0.99554 1.20598 0.87579 0.86135 0.76272 1.90759 1.16134 1.87720 1.50374 1.22717 0.91561 0.83363 1.05995 1.86188 1.35553 1.12514 1.88662 1.19148 0.92816 0.83581 0.96671 1.19853 0.95647 0.92401 1.09358 1.25213 0.93996 1.10730 0.88373 1.86546 1.82447 1.50619 1.16890 0.94034 0.75404 0.77854 0.82551 1.21120 0.96658 0.94482 0.97304 1.21463 0.92637 1.00718 1.02263 1.21416 1.01546 0.91228 0.95104 1.21573 0.92590 1.00464 1.08592 0.90425 0.88971 0.89152 0.87538 0.91979 0.90597 0.88415 0.91815 0.90696 0.92356 0.92494 0.89789 0.91981 0.92373 0.90342 0.92440 0.88846 0.91694 0.86350 0.86337 0.90527 0.76006 1.20733 1.23236 0.82511 0.82661 0.82754 0.83072 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.57 10.24 127.77 1.31 0.74 16 2 N -0.60 -0.06 2.87 -846.73 -2.43 -2.49 16 3 C 0.13 0.16 5.24 86.38 0.45 0.62 16 4 C -0.12 -0.15 3.96 -10.27 -0.04 -0.19 16 5 H 0.07 0.41 8.14 -2.39 -0.02 0.39 16 6 C -0.13 0.25 7.04 31.12 0.22 0.47 16 7 C 0.06 0.09 2.82 31.12 0.09 0.17 16 8 H 0.09 0.10 5.54 -2.38 -0.01 0.08 16 9 O -0.38 -1.58 10.00 -148.98 -1.49 -3.07 16 10 C 0.10 0.08 1.11 -10.80 -0.01 0.07 16 11 C -0.17 0.28 8.38 71.98 0.60 0.89 16 12 C -0.14 0.04 8.84 71.98 0.64 0.68 16 13 C -0.18 -0.02 8.38 71.98 0.60 0.59 16 14 C -0.13 -0.32 7.47 31.12 0.23 -0.09 16 15 C 0.51 3.77 7.75 87.66 0.68 4.45 16 16 O -0.57 -11.03 16.08 16.02 0.26 -10.77 16 17 C 0.04 0.06 3.77 71.24 0.27 0.33 16 18 O -0.32 -3.30 9.00 -73.36 -0.66 -3.96 16 19 C 0.12 0.74 6.66 22.51 0.15 0.89 16 20 C -0.17 -0.88 5.27 -19.77 -0.10 -0.98 16 21 C -0.07 -0.59 2.38 71.23 0.17 -0.42 16 22 O -0.56 -5.27 12.88 -148.98 -1.92 -7.19 16 23 Si 0.80 1.64 29.92 68.60 2.05 3.69 16 24 C -0.08 0.08 8.66 22.26 0.19 0.27 16 25 C -0.15 0.54 10.04 22.28 0.22 0.76 16 26 C -0.08 0.27 10.04 22.25 0.22 0.49 16 27 C -0.21 0.17 9.04 22.37 0.20 0.38 16 28 H 0.08 -0.87 8.14 -2.39 -0.02 -0.89 16 29 H 0.09 -1.02 7.64 -2.39 -0.02 -1.03 16 30 H 0.09 -1.16 6.44 -2.38 -0.02 -1.17 16 31 H 0.11 -0.37 7.77 -2.39 -0.02 -0.39 16 32 H 0.06 0.44 7.42 -2.39 -0.02 0.42 16 33 H 0.08 -0.26 8.14 -2.38 -0.02 -0.27 16 34 H 0.10 -0.29 7.89 -2.39 -0.02 -0.30 16 35 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 36 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 37 H 0.06 -0.10 7.02 -2.39 -0.02 -0.12 16 38 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 39 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 40 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 41 H 0.06 0.01 6.24 -2.39 -0.01 0.00 16 42 H 0.08 -0.17 8.14 -2.39 -0.02 -0.19 16 43 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 44 H 0.09 0.22 8.10 -2.39 -0.02 0.20 16 45 H 0.06 0.26 8.14 -2.38 -0.02 0.24 16 46 H 0.12 -0.59 6.92 -2.38 -0.02 -0.61 16 47 H 0.12 -0.54 7.63 -2.39 -0.02 -0.56 16 48 H 0.08 1.08 7.82 -2.39 -0.02 1.06 16 49 H 0.39 -0.28 8.70 -74.06 -0.64 -0.93 16 50 H -0.28 -1.61 7.11 99.48 0.71 -0.90 16 51 H -0.30 -3.06 7.11 99.48 0.71 -2.35 16 52 H 0.16 -1.04 5.13 -2.91 -0.01 -1.06 16 53 H 0.16 -1.37 8.06 -2.91 -0.02 -1.40 16 54 H 0.15 -1.40 8.06 -2.91 -0.02 -1.43 16 55 H 0.15 -1.02 6.30 -2.91 -0.02 -1.04 16 Total: 0.00 -28.64 434.33 2.18 -26.46 By element: Atomic # 1 Polarization: -13.07 SS G_CDS: 0.27 Total: -12.80 kcal Atomic # 6 Polarization: 4.03 SS G_CDS: 6.10 Total: 10.12 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: -2.43 Total: -2.49 kcal Atomic # 8 Polarization: -21.18 SS G_CDS: -3.81 Total: -24.99 kcal Atomic # 14 Polarization: 1.64 SS G_CDS: 2.05 Total: 3.69 kcal Total: -28.64 2.18 -26.46 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15093190_2989392.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.588 kcal (2) G-P(sol) polarization free energy of solvation -28.637 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.225 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.175 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.462 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.050 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds