Wall clock time and date at job start Tue Mar 9 2021 13:18:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.46500 * 120.00333 * 2 1 4 4 C 1.53005 * 109.46976 * 270.00006 * 3 2 1 5 5 H 1.08996 * 112.85231 * 45.32846 * 4 3 2 6 6 C 1.53776 * 113.61104 * 176.52816 * 4 3 2 7 7 C 1.53780 * 87.08085 * 139.98016 * 6 4 3 8 8 H 1.09000 * 113.62112 * 89.19845 * 7 6 4 9 9 O 1.42904 * 113.61213 * 220.01900 * 7 6 4 10 10 C 1.42907 * 113.99597 * 209.99669 * 9 7 6 11 11 C 1.53001 * 109.47349 * 60.00046 * 10 9 7 12 12 C 1.52998 * 109.46859 * 179.97438 * 10 9 7 13 13 C 1.52994 * 109.47305 * 299.99828 * 10 9 7 14 14 C 1.53784 * 113.61077 * 274.13039 * 4 3 2 15 15 C 1.34774 * 119.99946 * 179.97438 * 2 1 3 16 16 O 1.21637 * 120.00390 * 184.26708 * 15 2 1 17 17 C 1.47189 * 120.00186 * 4.26345 * 15 2 1 18 18 C 1.36010 * 123.46377 * 146.07507 * 17 15 2 19 19 S 1.70447 * 110.81983 * 179.75360 * 18 17 15 20 20 C 1.75505 * 92.44335 * 0.35303 * 19 18 17 21 21 C 1.50702 * 124.71332 * 179.90724 * 20 19 18 22 22 O 1.42895 * 109.47007 * 244.70169 * 21 20 19 23 23 Si 1.86296 * 109.47059 * 4.70092 * 21 20 19 24 24 C 1.32768 * 110.57641 * 359.64551 * 20 19 18 25 25 H 1.08993 * 109.47208 * 264.14763 * 1 2 3 26 26 H 1.09000 * 109.46880 * 24.14925 * 1 2 3 27 27 H 1.09007 * 109.46660 * 144.13959 * 1 2 3 28 28 H 1.09007 * 109.46702 * 29.99705 * 3 2 1 29 29 H 1.08992 * 109.47221 * 149.99835 * 3 2 1 30 30 H 1.09004 * 113.61339 * 254.52743 * 6 4 3 31 31 H 1.08996 * 113.61950 * 25.34344 * 6 4 3 32 32 H 1.09007 * 109.46674 * 59.99605 * 11 10 9 33 33 H 1.08991 * 109.47384 * 179.97438 * 11 10 9 34 34 H 1.08998 * 109.47006 * 299.99973 * 11 10 9 35 35 H 1.08998 * 109.47508 * 59.99970 * 12 10 9 36 36 H 1.08999 * 109.47406 * 180.02562 * 12 10 9 37 37 H 1.08998 * 109.47061 * 299.99865 * 12 10 9 38 38 H 1.09000 * 109.47440 * 60.00184 * 13 10 9 39 39 H 1.08997 * 109.47537 * 180.02562 * 13 10 9 40 40 H 1.09000 * 109.47502 * 300.00382 * 13 10 9 41 41 H 1.08994 * 113.61552 * 334.57372 * 14 4 3 42 42 H 1.09001 * 113.61085 * 105.47066 * 14 4 3 43 43 H 1.08001 * 124.59108 * 0.02562 * 18 17 15 44 44 H 1.08999 * 109.47091 * 124.70497 * 21 20 19 45 45 H 0.96703 * 114.00632 * 60.00107 * 22 21 20 46 46 H 1.48500 * 110.00126 * 58.68290 * 23 21 20 47 47 H 1.48503 * 110.00012 * 179.97438 * 23 21 20 48 48 H 1.07999 * 123.46089 * 180.26248 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1976 1.2687 0.0000 4 6 2.4526 1.7103 -1.4426 5 1 1.5717 1.6131 -2.0770 6 6 3.1444 3.0791 -1.5545 7 6 3.9737 2.4782 -2.7016 8 1 3.5102 2.5917 -3.6816 9 8 5.3455 2.8784 -2.6869 10 6 5.9484 2.9346 -3.9814 11 6 5.1938 3.9410 -4.8523 12 6 7.4081 3.3722 -3.8454 13 6 5.8887 1.5513 -4.6323 14 6 3.7245 1.1025 -2.0571 15 6 2.1389 -1.1672 0.0005 16 8 3.3527 -1.1687 0.0789 17 6 1.4060 -2.4402 -0.0937 18 6 1.8876 -3.5369 -0.7380 19 16 0.7813 -4.8301 -0.6425 20 6 -0.3689 -3.8767 0.2785 21 6 -1.7023 -4.3793 0.7689 22 8 -2.7511 -3.6527 0.1255 23 14 -1.8675 -6.1917 0.3704 24 6 0.1013 -2.6529 0.4881 25 1 -0.3633 -0.1048 1.0222 26 1 -0.3633 0.9377 -0.4204 27 1 -0.3633 -0.8329 -0.6021 28 1 1.6084 2.0284 0.5138 29 1 3.1499 1.1383 0.5138 30 1 2.4774 3.8809 -1.8714 31 1 3.7359 3.3424 -0.6777 32 1 5.2364 4.9266 -4.3884 33 1 5.6539 3.9842 -5.8394 34 1 4.1537 3.6297 -4.9491 35 1 7.9461 2.6555 -3.2249 36 1 7.8680 3.4155 -4.8327 37 1 7.4503 4.3578 -3.3819 38 1 4.8486 1.2399 -4.7292 39 1 6.3489 1.5940 -5.6194 40 1 6.4263 0.8342 -4.0119 41 1 4.4760 0.8236 -1.3185 42 1 3.5251 0.3106 -2.7792 43 1 2.8436 -3.5836 -1.2383 44 1 -1.7701 -4.2367 1.8474 45 1 -2.7524 -3.7340 -0.8381 46 1 -0.7642 -6.9544 1.0076 47 1 -3.1782 -6.6996 0.8495 48 1 -0.4366 -1.8943 1.0372 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15093190_6894386.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:18:54 Heat of formation + Delta-G solvation = -47.526009 kcal Electronic energy + Delta-G solvation = -28008.749874 eV Core-core repulsion = 24158.353758 eV Total energy + Delta-G solvation = -3850.396116 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.154 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.40145 -40.53405 -38.94285 -38.28231 -37.10938 -36.30787 -33.76107 -31.80299 -29.99109 -28.37594 -28.34019 -27.70465 -26.90509 -26.48686 -25.33124 -23.31091 -21.53080 -20.80283 -20.46343 -20.00630 -18.89372 -18.03689 -17.69626 -17.33635 -17.08981 -16.71108 -16.35498 -15.96313 -15.89937 -15.63710 -15.43808 -15.18286 -14.58894 -14.53553 -14.38267 -14.14076 -14.07227 -13.75878 -13.69180 -13.44225 -13.37282 -13.22903 -13.20175 -12.96136 -12.85920 -12.73418 -12.63601 -12.60208 -12.27488 -12.18457 -11.98252 -11.82028 -11.70157 -11.30679 -11.15254 -10.91135 -10.59905 -10.24822 -10.02987 -9.62757 -9.47445 -5.24655 -0.26090 0.34744 0.65979 0.94352 1.14283 1.52889 1.83366 1.99660 2.23944 2.81126 3.24521 3.45979 3.56145 3.70254 3.76387 3.86917 3.89326 3.94160 3.95262 4.03688 4.09576 4.13291 4.18666 4.26947 4.34690 4.39287 4.46580 4.51967 4.59638 4.65805 4.66285 4.77573 4.79636 4.79844 4.86319 4.90930 4.92439 4.93621 4.96637 4.97762 5.13062 5.13922 5.15305 5.26685 5.34845 5.39048 5.45994 5.58029 6.34935 6.37350 6.51642 7.21352 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.072 3.928 2 N -0.610 5.610 3 C 0.128 3.872 4 C -0.128 4.128 5 H 0.091 0.909 6 C -0.127 4.127 7 C 0.060 3.940 8 H 0.087 0.913 9 O -0.361 6.361 10 C 0.105 3.895 11 C -0.178 4.178 12 C -0.139 4.139 13 C -0.175 4.175 14 C -0.139 4.139 15 C 0.580 3.420 16 O -0.528 6.528 17 C -0.162 4.162 18 C -0.176 4.176 19 S 0.191 5.809 20 C -0.243 4.243 21 C -0.024 4.024 22 O -0.534 6.534 23 Si 0.654 3.346 24 C -0.085 4.085 25 H 0.059 0.941 26 H 0.074 0.926 27 H 0.079 0.921 28 H 0.081 0.919 29 H 0.089 0.911 30 H 0.072 0.928 31 H 0.093 0.907 32 H 0.065 0.935 33 H 0.067 0.933 34 H 0.058 0.942 35 H 0.063 0.937 36 H 0.070 0.930 37 H 0.063 0.937 38 H 0.057 0.943 39 H 0.065 0.935 40 H 0.064 0.936 41 H 0.096 0.904 42 H 0.061 0.939 43 H 0.175 0.825 44 H 0.124 0.876 45 H 0.381 0.619 46 H -0.238 1.238 47 H -0.233 1.233 48 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.114 -0.218 -3.944 5.703 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 N -0.342 5.342 3 C 0.005 3.995 4 C -0.147 4.147 5 H 0.109 0.891 6 C -0.165 4.165 7 C 0.002 3.998 8 H 0.105 0.895 9 O -0.280 6.280 10 C 0.066 3.934 11 C -0.236 4.236 12 C -0.196 4.196 13 C -0.233 4.233 14 C -0.177 4.177 15 C 0.367 3.633 16 O -0.405 6.405 17 C -0.179 4.179 18 C -0.314 4.314 19 S 0.457 5.543 20 C -0.359 4.359 21 C -0.138 4.138 22 O -0.340 6.340 23 Si 0.553 3.447 24 C -0.115 4.115 25 H 0.078 0.922 26 H 0.093 0.907 27 H 0.098 0.902 28 H 0.099 0.901 29 H 0.108 0.892 30 H 0.091 0.909 31 H 0.111 0.889 32 H 0.084 0.916 33 H 0.086 0.914 34 H 0.077 0.923 35 H 0.083 0.917 36 H 0.089 0.911 37 H 0.082 0.918 38 H 0.076 0.924 39 H 0.084 0.916 40 H 0.083 0.917 41 H 0.114 0.886 42 H 0.079 0.921 43 H 0.192 0.808 44 H 0.141 0.859 45 H 0.228 0.772 46 H -0.162 1.162 47 H -0.156 1.156 48 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -3.610 -2.325 -3.324 5.430 hybrid contribution 0.007 1.899 0.555 1.978 sum -3.603 -0.426 -2.769 4.564 Atomic orbital electron populations 1.22179 0.79312 1.03743 1.01845 1.47664 1.07041 1.05795 1.73733 1.21511 0.98135 0.83881 0.95956 1.22728 0.97929 0.96956 0.97118 0.89052 1.23199 0.97791 0.96101 0.99432 1.23666 0.82736 0.95241 0.98118 0.89494 1.88046 1.23969 1.88187 1.27835 1.21518 0.93940 0.94303 0.83665 1.22465 1.00640 1.00003 1.00449 1.21764 0.93166 1.02244 1.02425 1.22456 1.02408 0.97137 1.01278 1.23559 0.97223 0.96415 1.00467 1.17662 0.86677 0.82856 0.76123 1.90823 1.13347 1.87124 1.49197 1.20175 0.96240 0.95420 1.06083 1.25653 1.05094 0.96792 1.03882 1.83084 1.07767 1.13380 1.50061 1.24787 1.02734 0.98900 1.09520 1.24398 0.82608 1.07154 0.99611 1.86527 1.49108 1.73591 1.24751 0.95086 0.83384 0.74572 0.91668 1.21493 0.93187 0.96912 0.99878 0.92220 0.90690 0.90222 0.90113 0.89233 0.90916 0.88884 0.91642 0.91434 0.92317 0.91743 0.91143 0.91792 0.92418 0.91638 0.91658 0.88558 0.92052 0.80794 0.85913 0.77163 1.16152 1.15589 0.82491 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.16 8.88 59.85 0.53 0.37 16 2 N -0.61 -0.38 2.87 -182.94 -0.53 -0.91 16 3 C 0.13 0.04 5.24 -4.04 -0.02 0.01 16 4 C -0.13 0.00 3.96 -89.81 -0.36 -0.35 16 5 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 6 C -0.13 -0.01 7.47 -25.92 -0.19 -0.20 16 7 C 0.06 0.07 2.82 -25.83 -0.07 0.00 16 8 H 0.09 0.03 5.54 -51.93 -0.29 -0.26 16 9 O -0.36 -1.12 10.00 -35.23 -0.35 -1.47 16 10 C 0.10 0.14 1.11 -90.62 -0.10 0.04 16 11 C -0.18 -0.02 8.38 37.16 0.31 0.29 16 12 C -0.14 -0.10 8.84 37.16 0.33 0.22 16 13 C -0.18 -0.13 8.38 37.15 0.31 0.18 16 14 C -0.14 -0.26 7.08 -25.83 -0.18 -0.45 16 15 C 0.58 1.86 7.51 -12.63 -0.09 1.76 16 16 O -0.53 -3.50 15.95 5.24 0.08 -3.41 16 17 C -0.16 -0.25 5.38 -104.63 -0.56 -0.81 16 18 C -0.18 -0.13 10.67 29.93 0.32 0.19 16 19 S 0.19 -0.23 20.20 -107.50 -2.17 -2.40 16 20 C -0.24 0.23 5.66 -36.18 -0.20 0.02 16 21 C -0.02 0.04 2.94 36.01 0.11 0.14 16 22 O -0.53 0.87 12.88 -35.23 -0.45 0.42 16 23 Si 0.65 -1.23 30.92 -169.99 -5.26 -6.49 16 24 C -0.09 0.02 7.88 -39.02 -0.31 -0.29 16 25 H 0.06 -0.17 6.98 -51.93 -0.36 -0.53 16 26 H 0.07 -0.26 8.03 -51.93 -0.42 -0.68 16 27 H 0.08 -0.19 5.76 -51.93 -0.30 -0.49 16 28 H 0.08 -0.13 8.07 -51.93 -0.42 -0.55 16 29 H 0.09 0.21 7.10 -51.93 -0.37 -0.16 16 30 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.09 0.07 8.10 -51.93 -0.42 -0.35 16 32 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.06 -0.01 6.24 -51.93 -0.32 -0.34 16 35 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 36 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 37 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 38 H 0.06 0.04 7.02 -51.93 -0.36 -0.33 16 39 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 40 H 0.06 0.11 8.14 -51.93 -0.42 -0.32 16 41 H 0.10 0.42 7.76 -51.93 -0.40 0.01 16 42 H 0.06 0.14 8.14 -51.93 -0.42 -0.28 16 43 H 0.17 0.07 8.06 -52.49 -0.42 -0.35 16 44 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 45 H 0.38 -2.04 8.70 45.56 0.40 -1.65 16 46 H -0.24 -0.11 7.11 56.52 0.40 0.29 16 47 H -0.23 -0.21 7.11 56.52 0.40 0.20 16 48 H 0.16 -0.21 5.48 -52.49 -0.29 -0.50 16 LS Contribution 391.45 15.07 5.90 5.90 Total: 0.00 -6.73 391.45 -10.78 -17.52 By element: Atomic # 1 Polarization: -2.46 SS G_CDS: -7.82 Total: -10.28 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: -0.19 Total: 1.13 kcal Atomic # 7 Polarization: -0.38 SS G_CDS: -0.53 Total: -0.91 kcal Atomic # 8 Polarization: -3.75 SS G_CDS: -0.72 Total: -4.47 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.26 Total: -6.49 kcal Atomic # 16 Polarization: -0.23 SS G_CDS: -2.17 Total: -2.40 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -6.73 -10.78 -17.52 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15093190_6894386.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.010 kcal (2) G-P(sol) polarization free energy of solvation -6.733 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.742 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.784 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.516 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.526 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds