Wall clock time and date at job start Tue Mar 9 2021 13:19:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.36773 * 125.80054 * 2 1 4 4 C 1.47259 * 126.94659 * 359.97438 * 3 2 1 5 5 O 1.21628 * 119.99438 * 324.34152 * 4 3 2 6 6 N 1.34770 * 120.00160 * 144.61234 * 4 3 2 7 7 C 1.46503 * 120.00272 * 4.25300 * 6 4 3 8 8 C 1.46505 * 119.99923 * 184.24656 * 6 4 3 9 9 C 1.52999 * 109.47161 * 90.00515 * 8 6 4 10 10 H 1.09001 * 112.84578 * 314.66853 * 9 8 6 11 11 C 1.53782 * 113.61586 * 85.85889 * 9 8 6 12 12 C 1.53953 * 87.01675 * 139.95273 * 11 9 8 13 13 H 1.09002 * 113.53462 * 89.19594 * 12 11 9 14 14 O 1.42906 * 113.74281 * 220.05565 * 12 11 9 15 15 C 1.42899 * 113.99932 * 247.59940 * 14 12 11 16 16 C 1.52997 * 109.46983 * 60.00490 * 15 14 12 17 17 C 1.53004 * 109.46745 * 180.02562 * 15 14 12 18 18 C 1.52992 * 109.47258 * 300.00134 * 15 14 12 19 19 C 1.53773 * 113.61669 * 183.47129 * 9 8 6 20 20 C 1.46687 * 106.11185 * 180.24721 * 3 2 1 21 21 C 1.34486 * 106.33722 * 359.62855 * 20 3 2 22 22 C 1.50700 * 125.57695 * 180.12497 * 21 20 3 23 23 O 1.42901 * 109.46847 * 300.31524 * 22 21 20 24 24 Si 1.86300 * 109.47173 * 180.31704 * 22 21 20 25 25 N 1.34653 * 125.80073 * 180.02562 * 2 1 3 26 26 H 1.08996 * 109.47378 * 89.99619 * 1 2 3 27 27 H 1.09005 * 109.47331 * 210.00230 * 1 2 3 28 28 H 1.09007 * 109.47060 * 329.99988 * 1 2 3 29 29 H 1.08995 * 109.47279 * 84.81268 * 7 6 4 30 30 H 1.08995 * 109.47075 * 204.81933 * 7 6 4 31 31 H 1.09002 * 109.46749 * 324.81645 * 7 6 4 32 32 H 1.09002 * 109.46799 * 210.00467 * 8 6 4 33 33 H 1.08999 * 109.47369 * 330.00383 * 8 6 4 34 34 H 1.08999 * 113.61687 * 254.53463 * 11 9 8 35 35 H 1.09003 * 113.61224 * 25.43281 * 11 9 8 36 36 H 1.09002 * 109.47560 * 59.99799 * 16 15 14 37 37 H 1.08999 * 109.46952 * 179.97438 * 16 15 14 38 38 H 1.08999 * 109.47144 * 299.99705 * 16 15 14 39 39 H 1.08997 * 109.47408 * 60.00040 * 17 15 14 40 40 H 1.09001 * 109.46833 * 180.02562 * 17 15 14 41 41 H 1.09002 * 109.47246 * 299.99863 * 17 15 14 42 42 H 1.09000 * 109.47385 * 59.99856 * 18 15 14 43 43 H 1.09000 * 109.47027 * 180.02562 * 18 15 14 44 44 H 1.09005 * 109.47179 * 300.00097 * 18 15 14 45 45 H 1.09007 * 113.61175 * 334.56485 * 19 9 8 46 46 H 1.09001 * 113.61814 * 105.46630 * 19 9 8 47 47 H 1.08008 * 126.83505 * 179.76984 * 20 3 2 48 48 H 1.09002 * 109.47104 * 60.31703 * 22 21 20 49 49 H 0.96694 * 114.00229 * 299.99416 * 23 22 21 50 50 H 1.48493 * 110.00192 * 58.68155 * 24 22 21 51 51 H 1.48498 * 109.99954 * 180.02562 * 24 22 21 52 52 H 0.97005 * 124.85385 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8703 2.5156 -0.0005 5 8 0.8728 2.8423 -0.6150 6 7 2.5789 3.4416 0.6754 7 6 3.8335 3.0677 1.3330 8 6 2.0946 4.8221 0.7524 9 6 1.1991 4.9806 1.9828 10 1 0.4828 4.1663 2.0926 11 6 1.9746 5.2968 3.2726 12 6 0.8381 6.2753 3.6205 13 1 0.0234 5.8151 4.1795 14 8 1.2907 7.4983 4.2050 15 6 0.9164 7.6614 5.5745 16 6 1.5065 6.5192 6.4039 17 6 1.4506 8.9979 6.0934 18 6 -0.6089 7.6420 5.6921 19 6 0.5684 6.3772 2.1100 20 6 3.6881 0.6151 -0.0061 21 6 3.6096 -0.7274 -0.0008 22 6 4.7819 -1.6743 -0.0014 23 8 5.5756 -1.4489 -1.1681 24 14 4.1614 -3.4310 -0.0025 25 7 2.2947 -1.0921 -0.0005 26 1 -0.3634 0.0001 -1.0276 27 1 -0.3634 -0.8900 0.5139 28 1 -0.3633 0.8900 0.5139 29 1 4.6499 3.1162 0.6125 30 1 4.0323 3.7560 2.1544 31 1 3.7516 2.0525 1.7214 32 1 2.9436 5.5011 0.8311 33 1 1.5232 5.0574 -0.1455 34 1 2.0485 4.4510 3.9562 35 1 2.9331 5.7853 3.0970 36 1 2.5932 6.5329 6.3201 37 1 1.2214 6.6438 7.4485 38 1 1.1256 5.5672 6.0341 39 1 1.0299 9.8115 5.5024 40 1 1.1655 9.1221 7.1381 41 1 2.5372 9.0122 6.0095 42 1 -0.9898 6.6901 5.3222 43 1 -0.8943 7.7669 6.7366 44 1 -1.0293 8.4558 5.1012 45 1 1.1417 7.1618 1.6160 46 1 -0.4914 6.4025 1.8564 47 1 4.5890 1.2109 -0.0112 48 1 5.3875 -1.5034 0.8887 49 1 5.1001 -1.5831 -1.9993 50 1 3.3083 -3.6676 -1.1946 51 1 5.3080 -4.3746 -0.0024 52 1 1.9733 -2.0074 -0.0005 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15093190_9865296.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:19:11 Heat of formation + Delta-G solvation = -38.747923 kcal Electronic energy + Delta-G solvation = -30249.508709 eV Core-core repulsion = 26217.603603 eV Total energy + Delta-G solvation = -4031.905105 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.209 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.53378 -41.09065 -40.16307 -38.38428 -37.89248 -36.27784 -33.85630 -32.86887 -32.34878 -29.62389 -28.91219 -28.36755 -28.30031 -27.52893 -26.53587 -25.31816 -24.12395 -22.47965 -21.61778 -20.80330 -20.55356 -19.48208 -18.71620 -17.86148 -17.74674 -17.08519 -17.01013 -16.71687 -16.55951 -16.02972 -15.87652 -15.61761 -15.29588 -15.09734 -14.70261 -14.54338 -14.50612 -14.31893 -14.07737 -13.91550 -13.60402 -13.48117 -13.42838 -13.41017 -13.32503 -13.22724 -12.94148 -12.82321 -12.76414 -12.74307 -12.65094 -12.61939 -12.17266 -12.14741 -12.00760 -11.76357 -11.34164 -11.19698 -11.03348 -10.62134 -10.33298 -9.83082 -9.60786 -9.12733 -5.06745 0.77669 1.12536 1.30968 1.47060 1.82034 1.97400 2.23451 2.36002 2.75998 3.32846 3.54441 3.62563 3.67288 3.80179 3.82574 3.86229 3.92820 3.99212 4.00831 4.12066 4.19903 4.24272 4.33869 4.38265 4.49281 4.55933 4.59870 4.62608 4.66777 4.67481 4.69457 4.78972 4.79932 4.81473 4.83499 4.85302 4.89200 4.93528 4.95431 4.96836 5.00652 5.04748 5.14449 5.15670 5.20508 5.33772 5.35707 5.39650 5.62876 5.70515 5.87991 6.39691 6.42616 6.44606 6.49851 7.25550 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C 0.109 3.891 3 C -0.259 4.259 4 C 0.584 3.416 5 O -0.587 6.587 6 N -0.606 5.606 7 C 0.076 3.924 8 C 0.129 3.871 9 C -0.113 4.113 10 H 0.079 0.921 11 C -0.136 4.136 12 C 0.061 3.939 13 H 0.092 0.908 14 O -0.380 6.380 15 C 0.098 3.902 16 C -0.172 4.172 17 C -0.139 4.139 18 C -0.178 4.178 19 C -0.129 4.129 20 C -0.139 4.139 21 C -0.019 4.019 22 C -0.047 4.047 23 O -0.541 6.541 24 Si 0.758 3.242 25 N -0.533 5.533 26 H 0.078 0.922 27 H 0.097 0.903 28 H 0.071 0.929 29 H 0.062 0.938 30 H 0.084 0.916 31 H 0.083 0.917 32 H 0.095 0.905 33 H 0.066 0.934 34 H 0.072 0.928 35 H 0.091 0.909 36 H 0.060 0.940 37 H 0.074 0.926 38 H 0.059 0.941 39 H 0.056 0.944 40 H 0.083 0.917 41 H 0.059 0.941 42 H 0.060 0.940 43 H 0.077 0.923 44 H 0.057 0.943 45 H 0.090 0.910 46 H 0.070 0.930 47 H 0.155 0.845 48 H 0.142 0.858 49 H 0.386 0.614 50 H -0.279 1.279 51 H -0.294 1.294 52 H 0.426 0.574 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.271 -3.990 5.968 7.184 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.010 4.010 3 C -0.269 4.269 4 C 0.376 3.624 5 O -0.469 6.469 6 N -0.337 5.337 7 C -0.066 4.066 8 C 0.006 3.994 9 C -0.133 4.133 10 H 0.098 0.902 11 C -0.174 4.174 12 C 0.004 3.996 13 H 0.110 0.890 14 O -0.300 6.300 15 C 0.059 3.941 16 C -0.229 4.229 17 C -0.196 4.196 18 C -0.235 4.235 19 C -0.168 4.168 20 C -0.163 4.163 21 C -0.128 4.128 22 C -0.157 4.157 23 O -0.348 6.348 24 Si 0.662 3.338 25 N -0.134 5.134 26 H 0.097 0.903 27 H 0.116 0.884 28 H 0.090 0.910 29 H 0.080 0.920 30 H 0.103 0.897 31 H 0.101 0.899 32 H 0.113 0.887 33 H 0.084 0.916 34 H 0.091 0.909 35 H 0.109 0.891 36 H 0.079 0.921 37 H 0.093 0.907 38 H 0.078 0.922 39 H 0.076 0.924 40 H 0.102 0.898 41 H 0.078 0.922 42 H 0.078 0.922 43 H 0.096 0.904 44 H 0.076 0.924 45 H 0.108 0.892 46 H 0.089 0.911 47 H 0.172 0.828 48 H 0.160 0.840 49 H 0.236 0.764 50 H -0.205 1.205 51 H -0.221 1.221 52 H 0.268 0.732 Dipole moment (debyes) X Y Z Total from point charges 0.330 -4.443 5.588 7.147 hybrid contribution -0.023 0.065 -1.263 1.265 sum 0.307 -4.377 4.325 6.161 Atomic orbital electron populations 1.20486 0.86171 1.04306 1.03761 1.20426 0.94135 0.85509 1.00904 1.20143 0.94445 0.91560 1.20709 1.17778 0.81976 0.85173 0.77513 1.90745 1.28630 1.82166 1.45310 1.47697 1.24311 1.09262 1.52462 1.22164 0.83982 1.02795 0.97702 1.21443 0.98279 0.81879 0.97778 1.22534 0.98250 0.97160 0.95330 0.90247 1.23548 0.98706 0.98710 0.96428 1.23674 0.96981 0.85630 0.93336 0.89005 1.88012 1.77125 1.39351 1.25499 1.21671 0.94084 0.96506 0.81828 1.22422 1.01657 0.97990 1.00845 1.21789 1.01565 0.94746 1.01501 1.22455 0.95356 1.02338 1.03335 1.23214 1.01440 0.96749 0.95347 1.22046 0.95237 0.93024 1.06015 1.20625 0.84715 0.95394 1.12074 1.24656 0.92064 1.07119 0.91832 1.86624 1.40499 1.91151 1.16576 0.94671 0.80824 0.71839 0.86464 1.41624 1.05135 1.08671 1.57952 0.90305 0.88416 0.90964 0.91988 0.89741 0.89852 0.88710 0.91598 0.90887 0.89088 0.92086 0.90660 0.92245 0.92443 0.89779 0.92185 0.92155 0.90368 0.92382 0.89168 0.91123 0.82787 0.84025 0.76412 1.20516 1.22087 0.73235 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.04 9.82 71.24 0.70 0.74 16 2 C 0.11 0.20 7.17 41.78 0.30 0.50 16 3 C -0.26 -1.40 5.50 -19.04 -0.10 -1.51 16 4 C 0.58 5.53 7.36 86.62 0.64 6.17 16 5 O -0.59 -9.74 15.68 -4.12 -0.06 -9.81 16 6 N -0.61 -2.41 2.87 -850.85 -2.44 -4.85 16 7 C 0.08 -0.16 9.03 127.77 1.15 0.99 16 8 C 0.13 0.41 5.24 86.38 0.45 0.86 16 9 C -0.11 -0.20 3.96 -10.27 -0.04 -0.24 16 10 H 0.08 0.38 8.14 -2.39 -0.02 0.36 16 11 C -0.14 0.06 7.06 31.18 0.22 0.28 16 12 C 0.06 0.09 2.82 31.18 0.09 0.18 16 13 H 0.09 0.05 5.54 -2.39 -0.01 0.03 16 14 O -0.38 -1.73 10.00 -148.98 -1.49 -3.22 16 15 C 0.10 0.09 1.11 -10.80 -0.01 0.08 16 16 C -0.17 0.22 8.39 71.98 0.60 0.82 16 17 C -0.14 0.01 8.84 71.98 0.64 0.64 16 18 C -0.18 0.07 8.38 71.98 0.60 0.68 16 19 C -0.13 -0.27 7.47 31.12 0.23 -0.04 16 20 C -0.14 -0.21 8.62 23.62 0.20 -0.01 16 21 C -0.02 0.04 6.11 40.98 0.25 0.29 16 22 C -0.05 0.20 2.98 71.24 0.21 0.41 16 23 O -0.54 0.13 12.86 -148.98 -1.92 -1.79 16 24 Si 0.76 -4.67 30.94 68.60 2.12 -2.55 16 25 N -0.53 1.71 5.41 -171.07 -0.93 0.79 16 26 H 0.08 0.05 8.14 -2.39 -0.02 0.03 16 27 H 0.10 -0.65 8.14 -2.38 -0.02 -0.67 16 28 H 0.07 0.24 7.54 -2.38 -0.02 0.22 16 29 H 0.06 -0.20 7.34 -2.39 -0.02 -0.22 16 30 H 0.08 -0.42 7.60 -2.39 -0.02 -0.44 16 31 H 0.08 -0.21 5.83 -2.39 -0.01 -0.22 16 32 H 0.09 -0.03 7.81 -2.39 -0.02 -0.05 16 33 H 0.07 0.51 7.36 -2.39 -0.02 0.49 16 34 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 35 H 0.09 -0.04 7.92 -2.39 -0.02 -0.06 16 36 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 37 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 38 H 0.06 -0.08 7.02 -2.39 -0.02 -0.10 16 39 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 40 H 0.08 -0.26 8.14 -2.39 -0.02 -0.27 16 41 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 42 H 0.06 -0.04 6.24 -2.39 -0.01 -0.06 16 43 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 44 H 0.06 0.07 8.14 -2.38 -0.02 0.05 16 45 H 0.09 0.23 8.10 -2.38 -0.02 0.21 16 46 H 0.07 0.17 8.14 -2.39 -0.02 0.15 16 47 H 0.15 -0.02 6.40 -2.91 -0.02 -0.04 16 48 H 0.14 -0.97 7.96 -2.39 -0.02 -0.99 16 49 H 0.39 -1.88 8.70 -74.06 -0.64 -2.52 16 50 H -0.28 0.63 7.11 99.48 0.71 1.33 16 51 H -0.29 -0.61 7.11 99.48 0.71 0.10 16 52 H 0.43 -3.77 6.70 -92.70 -0.62 -4.39 16 Total: 0.00 -19.32 407.63 1.11 -18.22 By element: Atomic # 1 Polarization: -7.33 SS G_CDS: -0.31 Total: -7.64 kcal Atomic # 6 Polarization: 4.71 SS G_CDS: 6.14 Total: 10.85 kcal Atomic # 7 Polarization: -0.69 SS G_CDS: -3.37 Total: -4.06 kcal Atomic # 8 Polarization: -11.34 SS G_CDS: -3.47 Total: -14.81 kcal Atomic # 14 Polarization: -4.67 SS G_CDS: 2.12 Total: -2.55 kcal Total: -19.32 1.11 -18.22 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15093190_9865296.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.532 kcal (2) G-P(sol) polarization free energy of solvation -19.324 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.856 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.108 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.216 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.748 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds