Wall clock time and date at job start Tue Mar 9 2021 13:23:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35902 * 116.99799 * 2 1 4 4 C 1.38728 * 120.05300 * 180.02562 * 3 2 1 5 5 C 1.38153 * 119.94237 * 179.97438 * 4 3 2 6 6 C 1.38267 * 120.05337 * 359.97438 * 5 4 3 7 7 C 1.50697 * 119.94184 * 179.97438 * 6 5 4 8 8 H 1.09003 * 112.91266 * 11.25540 * 7 6 5 9 9 C 1.53782 * 113.61337 * 142.50510 * 7 6 5 10 10 C 1.53781 * 87.08121 * 139.98446 * 9 7 6 11 11 H 1.09000 * 113.69640 * 89.12384 * 10 9 7 12 12 N 1.46501 * 113.61292 * 220.02114 * 10 9 7 13 13 C 1.34778 * 119.99803 * 252.49614 * 12 10 9 14 14 O 1.21281 * 120.00435 * 359.97438 * 13 12 10 15 15 C 1.50708 * 119.99831 * 180.02562 * 13 12 10 16 16 O 1.42904 * 109.46948 * 179.97438 * 15 13 12 17 17 C 1.35893 * 116.99625 * 179.97438 * 16 15 13 18 18 C 1.38718 * 120.05425 * 179.97438 * 17 16 15 19 19 N 1.48003 * 120.02630 * 0.04443 * 18 17 16 20 20 O 1.21801 * 120.00323 * 180.02562 * 19 18 17 21 21 O 1.21801 * 120.00045 * 359.97438 * 19 18 17 22 22 C 1.38165 * 119.94629 * 179.74797 * 18 17 16 23 23 C 1.38249 * 120.05169 * 0.54808 * 22 18 17 24 24 C 1.50702 * 119.94279 * 179.72939 * 23 22 18 25 25 O 1.42892 * 109.47242 * 64.72420 * 24 23 22 26 26 Si 1.86298 * 109.46915 * 184.72958 * 24 23 22 27 27 C 1.38288 * 120.11246 * 359.45211 * 23 22 18 28 28 C 1.38124 * 120.05603 * 0.27271 * 27 23 22 29 29 C 1.53776 * 87.08089 * 334.56618 * 10 9 7 30 30 C 1.38263 * 120.11334 * 0.27718 * 6 5 4 31 31 C 1.38146 * 120.05291 * 359.44825 * 30 6 5 32 32 H 1.08994 * 109.46894 * 180.02562 * 1 2 3 33 33 H 1.09007 * 109.46974 * 300.00298 * 1 2 3 34 34 H 1.08995 * 109.47105 * 60.00216 * 1 2 3 35 35 H 1.07993 * 120.03493 * 359.95338 * 4 3 2 36 36 H 1.07994 * 119.97026 * 180.02562 * 5 4 3 37 37 H 1.08996 * 113.61445 * 25.43466 * 9 7 6 38 38 H 1.09004 * 113.61816 * 254.53076 * 9 7 6 39 39 H 0.97004 * 120.00141 * 72.49574 * 12 10 9 40 40 H 1.08997 * 109.46788 * 59.99995 * 15 13 12 41 41 H 1.09001 * 109.46747 * 300.00155 * 15 13 12 42 42 H 1.07995 * 119.97539 * 180.29634 * 22 18 17 43 43 H 1.09000 * 109.46724 * 304.72465 * 24 23 22 44 44 H 0.96703 * 114.00176 * 180.02562 * 25 24 23 45 45 H 1.48506 * 109.99834 * 178.68053 * 26 24 23 46 46 H 1.48502 * 110.00011 * 299.99318 * 26 24 23 47 47 H 1.07994 * 119.97193 * 180.25139 * 27 23 22 48 48 H 1.08002 * 120.02989 * 180.02562 * 28 27 23 49 49 H 1.09002 * 113.61688 * 139.98086 * 29 10 9 50 50 H 1.08998 * 113.61818 * 270.80239 * 29 10 9 51 51 H 1.08004 * 119.97266 * 179.72514 * 30 6 5 52 52 H 1.08001 * 120.02501 * 180.27199 * 31 30 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4313 1.2849 -0.0005 5 6 4.0560 2.5170 -0.0011 6 6 3.3018 3.6759 -0.0016 7 6 3.9859 5.0186 -0.0016 8 1 5.0560 4.9496 -0.1971 9 6 3.2698 6.0748 -0.8598 10 6 3.5926 7.0847 0.2541 11 1 4.5548 7.5814 0.1297 12 7 2.5007 8.0211 0.5317 13 6 2.6046 9.3096 0.1501 14 8 3.6022 9.6940 -0.4226 15 6 1.4816 10.2731 0.4361 16 8 1.8265 11.5677 -0.0610 17 6 0.9148 12.5597 0.1166 18 6 1.1845 13.8412 -0.3408 19 7 2.4654 14.1294 -1.0239 20 8 2.7020 15.2549 -1.4249 21 8 3.2835 13.2414 -1.1841 22 6 0.2538 14.8469 -0.1637 23 6 -0.9407 14.5794 0.4789 24 6 -1.9515 15.6796 0.6762 25 8 -2.4323 16.1184 -0.5959 26 14 -3.3761 15.0392 1.6915 27 6 -1.2120 13.3027 0.9359 28 6 -0.2872 12.2926 0.7562 29 6 3.6374 5.8876 1.2183 30 6 1.9210 3.6048 0.0042 31 6 1.2915 2.3751 -0.0010 32 1 -0.3633 -1.0276 0.0005 33 1 -0.3633 0.5139 0.8900 34 1 -0.3633 0.5138 -0.8900 35 1 4.0209 0.3801 -0.0002 36 1 5.1344 2.5751 -0.0019 37 1 2.2032 5.8870 -0.9833 38 1 3.7750 6.2877 -1.8019 39 1 1.7029 7.7139 0.9900 40 1 1.3165 10.3295 1.5121 41 1 0.5716 9.9260 -0.0534 42 1 0.4613 15.8436 -0.5239 43 1 -1.4822 16.5153 1.1952 44 1 -3.0878 16.8276 -0.5453 45 1 -4.3648 16.1235 1.9201 46 1 -4.0246 13.8994 0.9947 47 1 -2.1475 13.0954 1.4339 48 1 -0.4997 11.2955 1.1129 49 1 4.4394 5.9492 1.9539 50 1 2.6717 5.6495 1.6641 51 1 1.3341 4.5114 0.0082 52 1 0.2129 2.3202 -0.0009 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100430_4549638.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:23:12 Heat of formation + Delta-G solvation = -47.338022 kcal Electronic energy + Delta-G solvation = -38071.377431 eV Core-core repulsion = 32780.309269 eV Total energy + Delta-G solvation = -5291.068162 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 415.160 amu Computer time = 1.68 seconds Orbital eigenvalues (eV) -43.28936 -41.82821 -41.45926 -40.78968 -39.89871 -39.16677 -37.81529 -37.62184 -37.47032 -34.72238 -33.50061 -32.35941 -32.02334 -31.31662 -29.79721 -28.22274 -27.81202 -26.65317 -26.60263 -25.50416 -24.11130 -23.65376 -22.79564 -22.31902 -21.65569 -20.47327 -20.38435 -19.77397 -19.17806 -19.08697 -18.71102 -18.57481 -18.31206 -17.74584 -17.54859 -17.29513 -16.98930 -16.64814 -16.48480 -16.13280 -15.99531 -15.86304 -15.62434 -15.55585 -15.38732 -14.77573 -14.62188 -14.38408 -14.35637 -14.16601 -14.07745 -13.85305 -13.74003 -13.41285 -13.21716 -13.14823 -12.99445 -12.75363 -12.70569 -12.67943 -12.38444 -12.31271 -12.26673 -12.12937 -12.08448 -11.87076 -11.60594 -11.54071 -11.41153 -10.93273 -10.82933 -10.58703 -10.09327 -9.94163 -9.78297 -9.00124 -4.91990 -1.30345 -0.23558 0.16400 0.35532 0.40190 0.43381 1.23308 1.27099 1.47287 1.62811 1.96925 2.03184 2.36538 2.40162 2.75173 3.06889 3.23754 3.31984 3.49898 3.55971 3.61997 3.70654 3.72742 3.76128 3.86418 3.90499 3.96201 3.97430 4.02075 4.05573 4.19705 4.23710 4.28320 4.33227 4.36969 4.43603 4.51528 4.51902 4.62964 4.64887 4.72790 4.75038 4.78744 4.86258 4.87397 4.98905 5.08054 5.08147 5.12133 5.18187 5.19726 5.35192 5.41804 5.55777 5.72995 5.77817 5.85211 6.43256 6.45948 6.49327 6.53473 7.19275 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.343 6.343 3 C 0.102 3.898 4 C -0.170 4.170 5 C -0.083 4.083 6 C -0.109 4.109 7 C -0.064 4.064 8 H 0.101 0.899 9 C -0.143 4.143 10 C 0.120 3.880 11 H 0.092 0.908 12 N -0.696 5.696 13 C 0.508 3.492 14 O -0.567 6.567 15 C 0.023 3.977 16 O -0.291 6.291 17 C 0.194 3.806 18 C -0.105 4.105 19 N 0.035 4.965 20 O -0.202 6.202 21 O -0.173 6.173 22 C -0.004 4.004 23 C -0.112 4.112 24 C -0.095 4.095 25 O -0.562 6.562 26 Si 0.786 3.214 27 C -0.008 4.008 28 C -0.188 4.188 29 C -0.120 4.120 30 C -0.076 4.076 31 C -0.210 4.210 32 H 0.112 0.888 33 H 0.066 0.934 34 H 0.063 0.937 35 H 0.128 0.872 36 H 0.141 0.859 37 H 0.102 0.898 38 H 0.059 0.941 39 H 0.423 0.577 40 H 0.148 0.852 41 H 0.142 0.858 42 H 0.152 0.848 43 H 0.098 0.902 44 H 0.399 0.601 45 H -0.292 1.292 46 H -0.277 1.277 47 H 0.185 0.815 48 H 0.208 0.792 49 H 0.081 0.919 50 H 0.108 0.892 51 H 0.149 0.851 52 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.446 -4.541 10.259 16.756 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.257 6.257 3 C 0.057 3.943 4 C -0.188 4.188 5 C -0.101 4.101 6 C -0.109 4.109 7 C -0.083 4.083 8 H 0.120 0.880 9 C -0.181 4.181 10 C 0.015 3.985 11 H 0.111 0.889 12 N -0.350 5.350 13 C 0.294 3.706 14 O -0.445 6.445 15 C -0.054 4.054 16 O -0.201 6.201 17 C 0.144 3.856 18 C -0.191 4.191 19 N 0.545 4.455 20 O -0.410 6.410 21 O -0.387 6.387 22 C -0.023 4.023 23 C -0.113 4.113 24 C -0.202 4.202 25 O -0.373 6.373 26 Si 0.689 3.311 27 C -0.025 4.025 28 C -0.206 4.206 29 C -0.158 4.158 30 C -0.094 4.094 31 C -0.229 4.229 32 H 0.130 0.870 33 H 0.085 0.915 34 H 0.082 0.918 35 H 0.146 0.854 36 H 0.158 0.842 37 H 0.121 0.879 38 H 0.078 0.922 39 H 0.262 0.738 40 H 0.165 0.835 41 H 0.160 0.840 42 H 0.169 0.831 43 H 0.116 0.884 44 H 0.250 0.750 45 H -0.219 1.219 46 H -0.204 1.204 47 H 0.202 0.798 48 H 0.225 0.775 49 H 0.099 0.901 50 H 0.126 0.874 51 H 0.166 0.834 52 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -12.463 -5.162 9.885 16.723 hybrid contribution 0.093 1.061 -1.462 1.809 sum -12.370 -4.101 8.423 15.517 Atomic orbital electron populations 1.23296 0.76599 1.05332 1.02228 1.86050 1.23368 1.27492 1.88836 1.19342 0.92812 0.84825 0.97275 1.20642 0.91839 0.99313 1.07056 1.21107 1.00740 0.90887 0.97369 1.19682 0.93717 0.94415 1.03135 1.21221 0.99891 0.89675 0.97491 0.88032 1.23628 1.02149 0.94645 0.97713 1.22473 0.91199 0.87701 0.97124 0.88945 1.45624 1.21911 1.07411 1.60092 1.20548 0.87863 0.83682 0.78522 1.90848 1.33418 1.78133 1.42056 1.23167 0.98219 0.79660 1.04370 1.86473 1.40754 1.18224 1.74647 1.18945 0.89918 0.85456 0.91241 1.20845 0.88054 0.96195 1.13977 1.43864 1.03001 0.99984 0.98616 1.94494 1.84020 1.08852 1.53598 1.94678 1.43063 1.39612 1.61342 1.20849 0.90702 0.98403 0.92375 1.19447 0.93775 0.96218 1.01873 1.25237 1.04271 0.99330 0.91350 1.86546 1.63118 1.59256 1.28344 0.94168 0.74624 0.78652 0.83670 1.21704 0.99351 0.89892 0.91593 1.21785 0.90802 1.04262 1.03772 1.23410 1.04085 0.92173 0.96112 1.21037 0.93972 0.97516 0.96894 1.21475 1.00977 0.92073 1.08355 0.86955 0.91519 0.91805 0.85414 0.84166 0.87930 0.92197 0.73824 0.83501 0.84030 0.83058 0.88446 0.74989 1.21895 1.20353 0.79809 0.77496 0.90056 0.87357 0.83353 0.83773 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.04 16 2 O -0.34 -1.48 10.50 -92.45 -0.97 -2.45 16 3 C 0.10 0.36 6.69 22.50 0.15 0.52 16 4 C -0.17 -0.57 9.99 22.37 0.22 -0.34 16 5 C -0.08 -0.03 9.70 22.26 0.22 0.19 16 6 C -0.11 0.22 5.29 -19.85 -0.11 0.11 16 7 C -0.06 0.29 3.98 -11.01 -0.04 0.25 16 8 H 0.10 -0.42 8.09 -2.39 -0.02 -0.44 16 9 C -0.14 0.55 7.25 31.12 0.23 0.78 16 10 C 0.12 -0.44 4.24 45.52 0.19 -0.25 16 11 H 0.09 0.24 7.46 -2.39 -0.02 0.23 16 12 N -0.70 5.03 5.35 -440.03 -2.36 2.68 16 13 C 0.51 0.30 7.91 87.66 0.69 0.99 16 14 O -0.57 -8.37 16.10 16.00 0.26 -8.11 16 15 C 0.02 -0.17 5.22 71.24 0.37 0.20 16 16 O -0.29 -1.40 7.68 -63.33 -0.49 -1.89 16 17 C 0.19 0.28 6.67 22.51 0.15 0.43 16 18 C -0.11 -0.86 6.87 36.48 0.25 -0.61 16 19 N 0.04 0.61 4.45 -46.24 -0.21 0.41 16 20 O -0.20 -3.87 18.45 18.89 0.35 -3.52 16 21 O -0.17 -3.85 17.24 25.61 0.44 -3.41 16 22 C 0.00 -0.01 9.18 22.25 0.20 0.19 16 23 C -0.11 0.39 5.39 -19.85 -0.11 0.29 16 24 C -0.10 0.60 2.79 71.24 0.20 0.80 16 25 O -0.56 1.06 12.81 -148.98 -1.91 -0.85 16 26 Si 0.79 -8.02 29.85 68.60 2.05 -5.97 16 27 C -0.01 0.08 8.66 22.25 0.19 0.27 16 28 C -0.19 1.80 9.04 22.37 0.20 2.00 16 29 C -0.12 0.90 7.29 31.12 0.23 1.13 16 30 C -0.08 0.27 8.59 22.25 0.19 0.46 16 31 C -0.21 0.21 9.04 22.37 0.20 0.42 16 32 H 0.11 -0.75 8.14 -2.39 -0.02 -0.77 16 33 H 0.07 -0.42 7.66 -2.38 -0.02 -0.44 16 34 H 0.06 -0.37 7.66 -2.39 -0.02 -0.38 16 35 H 0.13 0.33 8.06 -2.91 -0.02 0.31 16 36 H 0.14 -0.40 8.05 -2.91 -0.02 -0.43 16 37 H 0.10 -0.70 6.32 -2.39 -0.02 -0.71 16 38 H 0.06 0.01 8.14 -2.38 -0.02 -0.01 16 39 H 0.42 -6.85 8.73 -92.71 -0.81 -7.66 16 40 H 0.15 -2.46 7.66 -2.39 -0.02 -2.48 16 41 H 0.14 -2.26 7.66 -2.39 -0.02 -2.28 16 42 H 0.15 0.67 7.61 -2.91 -0.02 0.65 16 43 H 0.10 -0.90 7.96 -2.39 -0.02 -0.92 16 44 H 0.40 -3.81 8.74 -74.06 -0.65 -4.46 16 45 H -0.29 1.16 7.11 99.48 0.71 1.87 16 46 H -0.28 1.59 7.05 99.48 0.70 2.29 16 47 H 0.19 -3.05 4.86 -2.91 -0.01 -3.07 16 48 H 0.21 -4.19 6.30 -2.91 -0.02 -4.21 16 49 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 50 H 0.11 -1.20 7.69 -2.39 -0.02 -1.22 16 51 H 0.15 -1.38 6.67 -2.91 -0.02 -1.40 16 52 H 0.14 -0.76 6.30 -2.91 -0.02 -0.78 16 Total: 0.00 -42.66 438.10 1.51 -41.16 By element: Atomic # 1 Polarization: -26.50 SS G_CDS: -0.41 Total: -26.90 kcal Atomic # 6 Polarization: 4.11 SS G_CDS: 4.75 Total: 8.86 kcal Atomic # 7 Polarization: 5.65 SS G_CDS: -2.56 Total: 3.08 kcal Atomic # 8 Polarization: -17.90 SS G_CDS: -2.32 Total: -20.22 kcal Atomic # 14 Polarization: -8.02 SS G_CDS: 2.05 Total: -5.97 kcal Total: -42.66 1.51 -41.16 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_4549638.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.182 kcal (2) G-P(sol) polarization free energy of solvation -42.664 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.846 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.508 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.156 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.338 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.68 seconds