Wall clock time and date at job start Tue Mar 9 2021 13:23:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35895 * 117.00072 * 2 1 4 4 C 1.38738 * 120.05690 * 179.97438 * 3 2 1 5 5 C 1.38140 * 119.94286 * 180.02562 * 4 3 2 6 6 C 1.38268 * 120.05910 * 0.02562 * 5 4 3 7 7 C 1.50697 * 119.94315 * 179.97438 * 6 5 4 8 8 H 1.08998 * 112.85072 * 348.80632 * 7 6 5 9 9 C 1.53782 * 113.61251 * 120.00517 * 7 6 5 10 10 C 1.53784 * 87.08179 * 139.97736 * 9 7 6 11 11 H 1.09003 * 113.61056 * 89.20075 * 10 9 7 12 12 N 1.46498 * 113.61554 * 220.01794 * 10 9 7 13 13 C 1.34773 * 119.99840 * 205.00390 * 12 10 9 14 14 O 1.21288 * 120.00303 * 359.97438 * 13 12 10 15 15 C 1.50699 * 119.99983 * 180.02562 * 13 12 10 16 16 O 1.42903 * 109.47141 * 179.97438 * 15 13 12 17 17 C 1.35900 * 116.99934 * 179.97438 * 16 15 13 18 18 C 1.38750 * 120.02845 * 179.97438 * 17 16 15 19 19 C 1.50697 * 119.97094 * 0.02562 * 18 17 16 20 20 O 1.42901 * 109.46871 * 75.00071 * 19 18 17 21 21 Si 1.86303 * 109.47164 * 195.00104 * 19 18 17 22 22 C 1.38201 * 120.05532 * 180.02562 * 18 17 16 23 23 C 1.38153 * 120.11049 * 0.02562 * 22 18 17 24 24 C 1.38797 * 120.05322 * 359.97438 * 23 22 18 25 25 O 1.35898 * 120.02645 * 179.97438 * 24 23 22 26 26 C 1.42897 * 117.00072 * 0.02562 * 25 24 23 27 27 C 1.38615 * 119.94590 * 0.02562 * 24 23 22 28 28 C 1.53778 * 87.08202 * 334.57017 * 10 9 7 29 29 C 1.38262 * 120.10905 * 0.25313 * 6 5 4 30 30 C 1.38145 * 120.05519 * 359.45354 * 29 6 5 31 31 H 1.08996 * 109.47310 * 300.00218 * 1 2 3 32 32 H 1.09000 * 109.46877 * 60.00333 * 1 2 3 33 33 H 1.08998 * 109.47222 * 179.97438 * 1 2 3 34 34 H 1.07998 * 120.02518 * 0.04290 * 4 3 2 35 35 H 1.08005 * 119.97424 * 180.02562 * 5 4 3 36 36 H 1.08997 * 113.61351 * 25.43168 * 9 7 6 37 37 H 1.09001 * 113.61040 * 254.52595 * 9 7 6 38 38 H 0.97000 * 120.00116 * 24.99529 * 12 10 9 39 39 H 1.08997 * 109.47707 * 59.99395 * 15 13 12 40 40 H 1.08997 * 109.46952 * 299.99366 * 15 13 12 41 41 H 1.08994 * 109.47099 * 315.00007 * 19 18 17 42 42 H 0.96701 * 114.00064 * 60.00233 * 20 19 18 43 43 H 1.48499 * 110.00391 * 180.02562 * 21 19 18 44 44 H 1.48502 * 109.99986 * 301.32121 * 21 19 18 45 45 H 1.08000 * 119.94468 * 179.97438 * 22 18 17 46 46 H 1.07992 * 119.97664 * 179.97438 * 23 22 18 47 47 H 1.08997 * 109.47251 * 300.00322 * 26 25 24 48 48 H 1.09003 * 109.46850 * 60.00726 * 26 25 24 49 49 H 1.09002 * 109.46749 * 180.02562 * 26 25 24 50 50 H 1.08004 * 120.05142 * 179.72861 * 27 24 23 51 51 H 1.08994 * 113.61760 * 139.98404 * 28 10 9 52 52 H 1.09005 * 113.60995 * 270.88707 * 28 10 9 53 53 H 1.08001 * 119.97007 * 179.70009 * 29 6 5 54 54 H 1.08006 * 120.02907 * 180.29828 * 30 29 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4314 1.2848 0.0005 5 6 4.0561 2.5169 0.0011 6 6 3.3019 3.6758 0.0016 7 6 3.9861 5.0185 0.0028 8 1 5.0562 4.9481 0.1981 9 6 3.6384 5.8881 -1.2170 10 6 3.5929 7.0847 -0.2522 11 1 4.5551 7.5813 -0.1269 12 7 2.5012 8.0213 -0.5299 13 6 2.6050 9.3096 -0.1477 14 8 3.6020 9.6934 0.4266 15 6 1.4818 10.2729 -0.4329 16 8 1.8260 11.5671 0.0659 17 6 0.9145 12.5593 -0.1117 18 6 1.1838 13.8402 0.3485 19 6 2.4881 14.1311 1.0451 20 8 3.5411 14.1867 0.0807 21 14 2.3687 15.7666 1.9293 22 6 0.2570 14.8495 0.1687 23 6 -0.9398 14.5858 -0.4691 24 6 -1.2139 13.3061 -0.9313 25 8 -2.3916 13.0473 -1.5581 26 6 -3.3008 14.1395 -1.7075 27 6 -0.2860 12.2921 -0.7521 28 6 3.2695 6.0743 0.8611 29 6 1.9211 3.6047 0.0069 30 6 1.2916 2.3751 0.0002 31 1 -0.3634 0.5138 0.8899 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3633 -1.0276 -0.0005 34 1 4.0209 0.3799 0.0003 35 1 5.1346 2.5750 0.0011 36 1 2.6726 5.6493 -1.6623 37 1 4.4409 5.9500 -1.9520 38 1 1.7038 7.7144 -0.9890 39 1 0.5719 9.9255 0.0565 40 1 1.3165 10.3300 -1.5087 41 1 2.6981 13.3422 1.7673 42 1 3.4202 14.8681 -0.5948 43 1 3.6489 16.0654 2.6199 44 1 2.0510 16.8459 0.9601 45 1 0.4684 15.8458 0.5280 46 1 -1.6626 15.3760 -0.6081 47 1 -3.5708 14.5246 -0.7242 48 1 -2.8268 14.9298 -2.2897 49 1 -4.1985 13.7971 -2.2223 50 1 -0.4994 11.2947 -1.1072 51 1 3.7741 6.2866 1.8036 52 1 2.2028 5.8864 0.9837 53 1 1.3343 4.5114 0.0122 54 1 0.2129 2.3201 -0.0005 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100430_4974312.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:23:35 Heat of formation + Delta-G solvation = -85.837148 kcal Electronic energy + Delta-G solvation = -36348.537027 eV Core-core repulsion = 31412.596043 eV Total energy + Delta-G solvation = -4935.940985 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.181 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -41.88468 -41.53333 -40.88870 -40.13503 -39.51559 -38.37644 -37.79478 -37.00272 -34.75048 -32.31332 -32.04338 -31.60434 -31.11224 -29.46603 -28.37108 -28.19905 -26.68844 -26.13434 -25.57152 -23.90730 -23.54289 -22.50933 -22.33320 -21.66713 -20.42110 -19.97064 -19.17062 -18.58026 -18.09604 -18.00151 -17.55271 -17.49057 -17.20182 -16.97117 -16.67456 -16.65805 -16.50108 -16.14867 -16.03730 -15.95992 -15.61672 -15.40314 -15.17624 -15.06708 -14.63301 -14.57130 -14.49048 -14.37207 -14.11230 -13.75768 -13.53196 -13.44451 -13.33860 -13.21978 -13.14383 -13.01568 -12.76855 -12.48488 -12.37857 -12.29971 -12.12280 -12.02710 -11.66019 -11.63174 -11.62488 -11.56952 -11.43713 -10.96199 -10.51524 -10.13912 -9.95919 -9.70407 -9.10692 -9.01920 -4.93061 0.19809 0.30515 0.38546 0.41491 1.31700 1.41227 1.46009 1.55635 1.96354 2.25043 2.38407 2.56001 2.59760 2.73281 3.45480 3.49558 3.53494 3.69009 3.72178 3.72916 3.80290 3.88224 3.94393 3.95210 3.99918 4.05042 4.06525 4.16716 4.17274 4.26943 4.34625 4.35770 4.40453 4.41690 4.42587 4.46354 4.49573 4.62254 4.66132 4.71530 4.72355 4.75568 4.79131 4.83866 4.96227 5.02126 5.04010 5.09623 5.15320 5.23319 5.27631 5.33150 5.40092 5.46426 5.52604 5.71648 5.83297 6.13419 6.35873 6.44289 6.45361 6.57312 7.11538 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.342 6.342 3 C 0.103 3.897 4 C -0.169 4.169 5 C -0.082 4.082 6 C -0.110 4.110 7 C -0.062 4.062 8 H 0.104 0.896 9 C -0.122 4.122 10 C 0.119 3.881 11 H 0.094 0.906 12 N -0.699 5.699 13 C 0.514 3.486 14 O -0.570 6.570 15 C 0.034 3.966 16 O -0.303 6.303 17 C 0.177 3.823 18 C -0.196 4.196 19 C -0.078 4.078 20 O -0.550 6.550 21 Si 0.781 3.219 22 C -0.041 4.041 23 C -0.238 4.238 24 C 0.165 3.835 25 O -0.330 6.330 26 C 0.016 3.984 27 C -0.251 4.251 28 C -0.141 4.141 29 C -0.078 4.078 30 C -0.211 4.211 31 H 0.063 0.937 32 H 0.065 0.935 33 H 0.113 0.887 34 H 0.130 0.870 35 H 0.142 0.858 36 H 0.105 0.895 37 H 0.081 0.919 38 H 0.421 0.579 39 H 0.125 0.875 40 H 0.119 0.881 41 H 0.097 0.903 42 H 0.381 0.619 43 H -0.308 1.308 44 H -0.262 1.262 45 H 0.156 0.844 46 H 0.157 0.843 47 H 0.070 0.930 48 H 0.066 0.934 49 H 0.116 0.884 50 H 0.154 0.846 51 H 0.063 0.937 52 H 0.101 0.899 53 H 0.146 0.854 54 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.087 0.200 -2.526 10.401 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.256 6.256 3 C 0.058 3.942 4 C -0.187 4.187 5 C -0.100 4.100 6 C -0.110 4.110 7 C -0.080 4.080 8 H 0.123 0.877 9 C -0.160 4.160 10 C 0.014 3.986 11 H 0.112 0.888 12 N -0.352 5.352 13 C 0.300 3.700 14 O -0.448 6.448 15 C -0.044 4.044 16 O -0.215 6.215 17 C 0.131 3.869 18 C -0.197 4.197 19 C -0.185 4.185 20 O -0.357 6.357 21 Si 0.685 3.315 22 C -0.059 4.059 23 C -0.257 4.257 24 C 0.118 3.882 25 O -0.243 6.243 26 C -0.078 4.078 27 C -0.271 4.271 28 C -0.180 4.180 29 C -0.096 4.096 30 C -0.229 4.229 31 H 0.082 0.918 32 H 0.084 0.916 33 H 0.131 0.869 34 H 0.148 0.852 35 H 0.160 0.840 36 H 0.123 0.877 37 H 0.100 0.900 38 H 0.259 0.741 39 H 0.142 0.858 40 H 0.137 0.863 41 H 0.115 0.885 42 H 0.230 0.770 43 H -0.237 1.237 44 H -0.188 1.188 45 H 0.173 0.827 46 H 0.175 0.825 47 H 0.089 0.911 48 H 0.085 0.915 49 H 0.135 0.865 50 H 0.171 0.829 51 H 0.082 0.918 52 H 0.119 0.881 53 H 0.163 0.837 54 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -8.666 0.407 -1.695 8.839 hybrid contribution 0.044 -0.273 -1.291 1.321 sum -8.622 0.135 -2.986 9.125 Atomic orbital electron populations 1.23297 0.76609 1.05363 1.02195 1.86046 1.23348 1.27428 1.88816 1.19340 0.92842 0.84775 0.97219 1.20648 0.91775 0.99341 1.06965 1.21109 1.00781 0.90806 0.97279 1.19677 0.93651 0.94473 1.03220 1.21215 0.99997 0.89631 0.97201 0.87731 1.23424 1.03946 0.92376 0.96291 1.22519 0.91100 0.87664 0.97321 0.88760 1.45678 1.21958 1.07595 1.59970 1.20505 0.87658 0.83568 0.78243 1.90778 1.33367 1.78241 1.42404 1.22761 0.97493 0.81365 1.02788 1.86228 1.41899 1.17507 1.75894 1.18589 0.87266 0.87923 0.93170 1.19607 0.99373 0.91895 1.08834 1.25157 0.84903 1.13787 0.94680 1.86652 1.46207 1.60028 1.42841 0.94124 0.83345 0.72092 0.81982 1.20945 0.91789 0.98519 0.94616 1.21398 1.00504 0.96636 1.07113 1.18871 0.85523 0.93184 0.90580 1.86053 1.25950 1.39487 1.72803 1.23403 0.92294 0.89075 1.03033 1.20556 0.94200 1.01373 1.10936 1.23616 1.02128 0.94497 0.97754 1.21029 0.94070 0.97480 0.96993 1.21466 1.00960 0.92095 1.08402 0.91791 0.91643 0.86856 0.85246 0.83989 0.87714 0.90015 0.74124 0.85755 0.86306 0.88473 0.77026 1.23678 1.18819 0.82724 0.82533 0.91104 0.91500 0.86539 0.82856 0.91790 0.88108 0.83673 0.83868 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.06 16 2 O -0.34 -1.76 10.50 -92.37 -0.97 -2.73 16 3 C 0.10 0.47 6.69 22.51 0.15 0.62 16 4 C -0.17 -0.68 9.99 22.37 0.22 -0.46 16 5 C -0.08 -0.09 9.70 22.25 0.22 0.12 16 6 C -0.11 0.07 5.29 -19.85 -0.11 -0.03 16 7 C -0.06 0.19 3.98 -11.01 -0.04 0.15 16 8 H 0.10 -0.35 8.09 -2.39 -0.02 -0.37 16 9 C -0.12 0.63 7.30 31.12 0.23 0.86 16 10 C 0.12 -0.16 4.24 45.52 0.19 0.04 16 11 H 0.09 0.40 7.46 -2.39 -0.02 0.39 16 12 N -0.70 2.21 5.35 -440.04 -2.36 -0.14 16 13 C 0.51 2.37 7.91 87.66 0.69 3.06 16 14 O -0.57 -9.47 16.10 15.98 0.26 -9.21 16 15 C 0.03 -0.01 5.22 71.24 0.37 0.36 16 16 O -0.30 -2.55 8.99 -73.39 -0.66 -3.21 16 17 C 0.18 0.97 6.66 22.49 0.15 1.12 16 18 C -0.20 -0.86 5.27 -19.75 -0.10 -0.96 16 19 C -0.08 -0.48 2.37 71.23 0.17 -0.32 16 20 O -0.55 -5.62 12.88 -148.98 -1.92 -7.54 16 21 Si 0.78 0.64 30.24 68.60 2.07 2.72 16 22 C -0.04 0.01 8.65 22.24 0.19 0.20 16 23 C -0.24 0.27 9.04 22.38 0.20 0.47 16 24 C 0.16 0.23 6.68 22.49 0.15 0.38 16 25 O -0.33 -0.12 10.49 -92.40 -0.97 -1.09 16 26 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 27 C -0.25 -0.47 8.97 22.46 0.20 -0.27 16 28 C -0.14 0.33 7.25 31.12 0.23 0.55 16 29 C -0.08 0.13 8.61 22.25 0.19 0.32 16 30 C -0.21 -0.10 9.04 22.37 0.20 0.10 16 31 H 0.06 -0.30 7.66 -2.39 -0.02 -0.32 16 32 H 0.06 -0.33 7.66 -2.39 -0.02 -0.35 16 33 H 0.11 -0.67 8.14 -2.39 -0.02 -0.69 16 34 H 0.13 0.39 8.06 -2.91 -0.02 0.37 16 35 H 0.14 -0.34 8.05 -2.91 -0.02 -0.36 16 36 H 0.10 -0.84 7.71 -2.39 -0.02 -0.86 16 37 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 38 H 0.42 -4.57 8.73 -92.71 -0.81 -5.38 16 39 H 0.12 -0.84 7.66 -2.39 -0.02 -0.86 16 40 H 0.12 -0.68 7.66 -2.39 -0.02 -0.70 16 41 H 0.10 0.91 7.82 -2.39 -0.02 0.89 16 42 H 0.38 1.02 8.70 -74.06 -0.64 0.37 16 43 H -0.31 -2.86 7.11 99.48 0.71 -2.16 16 44 H -0.26 -0.27 6.68 99.48 0.66 0.40 16 45 H 0.16 -0.67 4.85 -2.91 -0.01 -0.69 16 46 H 0.16 -0.99 6.29 -2.91 -0.02 -1.01 16 47 H 0.07 -0.62 7.66 -2.39 -0.02 -0.64 16 48 H 0.07 -0.55 7.66 -2.39 -0.02 -0.57 16 49 H 0.12 -1.13 8.14 -2.39 -0.02 -1.15 16 50 H 0.15 -0.41 6.30 -2.91 -0.02 -0.43 16 51 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 52 H 0.10 -0.48 6.29 -2.38 -0.01 -0.49 16 53 H 0.15 -0.98 6.63 -2.91 -0.02 -1.00 16 54 H 0.14 -0.52 6.30 -2.91 -0.02 -0.54 16 Total: 0.00 -30.02 440.66 0.70 -29.32 By element: Atomic # 1 Polarization: -16.02 SS G_CDS: -0.49 Total: -16.51 kcal Atomic # 6 Polarization: 2.65 SS G_CDS: 5.73 Total: 8.38 kcal Atomic # 7 Polarization: 2.21 SS G_CDS: -2.36 Total: -0.14 kcal Atomic # 8 Polarization: -19.51 SS G_CDS: -4.26 Total: -23.77 kcal Atomic # 14 Polarization: 0.64 SS G_CDS: 2.07 Total: 2.72 kcal Total: -30.02 0.70 -29.32 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_4974312.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.512 kcal (2) G-P(sol) polarization free energy of solvation -30.020 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.533 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.696 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.325 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.837 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds