Wall clock time and date at job start Tue Mar 9 2021 13:25:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86304 * 109.47111 * 2 1 4 4 C 1.50693 * 109.47196 * 120.00635 * 2 1 3 5 5 C 1.34459 * 126.47993 * 255.02473 * 4 2 1 6 6 N 1.36560 * 109.98329 * 179.97438 * 5 4 2 7 7 C 1.37830 * 109.86383 * 359.97438 * 6 5 4 8 8 C 1.38640 * 133.37985 * 180.02562 * 7 6 5 9 9 C 1.39321 * 119.66388 * 179.97438 * 8 7 6 10 10 C 1.47585 * 119.83012 * 179.97438 * 9 8 7 11 11 O 1.21592 * 120.00276 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99886 * 179.97438 * 10 9 8 13 13 C 1.46496 * 119.99942 * 180.02562 * 12 10 9 14 14 H 1.08995 * 109.47253 * 35.00473 * 13 12 10 15 15 C 1.53004 * 109.47166 * 155.00604 * 13 12 10 16 16 C 1.53003 * 109.47082 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47067 * 299.99504 * 16 15 13 18 18 H 1.08995 * 109.47413 * 300.00319 * 17 16 15 19 19 O 1.42897 * 109.47053 * 179.97438 * 17 16 15 20 20 C 1.42893 * 113.99970 * 150.00089 * 19 17 16 21 21 F 1.39902 * 109.47329 * 300.00260 * 20 19 17 22 22 F 1.39910 * 109.47119 * 60.00526 * 20 19 17 23 23 C 1.53004 * 109.46764 * 60.00301 * 17 16 15 24 24 C 1.52998 * 109.47376 * 299.99833 * 23 17 16 25 25 C 1.40195 * 120.33832 * 359.97438 * 9 8 7 26 26 C 1.36238 * 120.37716 * 0.03792 * 25 9 8 27 27 C 1.39879 * 119.95806 * 0.23967 * 26 25 9 28 28 H 0.96697 * 113.99971 * 299.99790 * 1 2 3 29 29 H 1.09002 * 109.47180 * 240.00668 * 2 1 3 30 30 H 1.48496 * 110.00302 * 300.00674 * 3 2 1 31 31 H 1.48504 * 109.99633 * 61.32327 * 3 2 1 32 32 H 1.08003 * 125.00972 * 359.94131 * 5 4 2 33 33 H 0.97005 * 125.06625 * 179.97438 * 6 5 4 34 34 H 1.08003 * 120.16907 * 0.02562 * 8 7 6 35 35 H 0.97002 * 119.99670 * 0.02562 * 12 10 9 36 36 H 1.08997 * 109.46695 * 299.99969 * 15 13 12 37 37 H 1.08995 * 109.47141 * 59.99800 * 15 13 12 38 38 H 1.08996 * 109.46764 * 59.99748 * 16 15 13 39 39 H 1.08994 * 109.46682 * 179.97438 * 16 15 13 40 40 H 1.08999 * 109.47342 * 180.02562 * 20 19 17 41 41 H 1.09003 * 109.47305 * 60.00106 * 23 17 16 42 42 H 1.09007 * 109.46737 * 179.97438 * 23 17 16 43 43 H 1.09008 * 109.47021 * 299.99929 * 24 23 17 44 44 H 1.09005 * 109.47248 * 180.02562 * 24 23 17 45 45 H 1.07996 * 119.81423 * 180.02562 * 25 9 8 46 46 H 1.08002 * 120.01783 * 179.97438 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 2.4612 -0.1364 2.3247 6 7 2.8027 -1.0948 3.2355 7 6 2.4936 -2.3433 2.7399 8 6 2.6292 -3.6279 3.2432 9 6 2.2107 -4.7154 2.4795 10 6 2.3538 -6.0846 3.0115 11 8 2.8364 -6.2614 4.1135 12 7 1.9496 -7.1391 2.2758 13 6 2.0912 -8.4981 2.8041 14 1 1.9280 -8.4879 3.8817 15 6 1.0598 -9.4132 2.1407 16 6 1.2081 -10.8327 2.6920 17 6 2.6164 -11.3511 2.3937 18 1 2.7792 -11.3610 1.3161 19 8 2.7550 -12.6767 2.9091 20 6 3.6665 -13.4942 2.1725 21 9 3.2253 -13.6096 0.8499 22 9 4.9373 -12.9092 2.1909 23 6 3.6477 -10.4360 3.0571 24 6 3.4995 -9.0165 2.5059 25 6 1.6543 -4.5158 1.2083 26 6 1.5176 -3.2568 0.7061 27 6 1.9384 -2.1551 1.4584 28 1 -0.3933 0.4417 0.7650 29 1 1.7923 -0.5137 -0.8901 30 1 1.5614 2.4680 -1.2084 31 1 1.5879 2.4585 1.2243 32 1 2.5972 0.9261 2.4627 33 1 3.2031 -0.9227 4.1021 34 1 3.0563 -3.7848 4.2227 35 1 1.5650 -6.9980 1.3966 36 1 0.0566 -9.0436 2.3528 37 1 1.2230 -9.4234 1.0631 38 1 1.0453 -10.8227 3.7697 39 1 0.4731 -11.4844 2.2198 40 1 3.7153 -14.4840 2.6265 41 1 3.4849 -10.4262 4.1348 42 1 4.6510 -10.8057 2.8449 43 1 3.6624 -9.0264 1.4281 44 1 4.2345 -8.3647 2.9781 45 1 1.3323 -5.3648 0.6237 46 1 1.0886 -3.1097 -0.2741 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100670_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:04 Heat of formation + Delta-G solvation = -169.351374 kcal Electronic energy + Delta-G solvation = -32528.291720 eV Core-core repulsion = 27633.749709 eV Total energy + Delta-G solvation = -4894.542011 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.143 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -50.06724 -48.16834 -42.49180 -41.15314 -39.90008 -38.09364 -37.73724 -37.34943 -34.78391 -33.27237 -31.96913 -31.13533 -30.71881 -29.49929 -26.60955 -26.39481 -24.82203 -23.95807 -23.60549 -22.99083 -21.46052 -21.13360 -20.82426 -19.48779 -19.32705 -18.85162 -18.64482 -18.34749 -17.85567 -17.21895 -16.92993 -16.50005 -16.25672 -15.96312 -15.77360 -15.67884 -15.58209 -15.26113 -15.03844 -14.98882 -14.77611 -14.75170 -14.58000 -14.48849 -14.36379 -14.18906 -13.89449 -13.71448 -13.42646 -13.32184 -13.10633 -12.88938 -12.59839 -12.50020 -12.41212 -12.25901 -12.18478 -11.98974 -11.80924 -11.55302 -11.08910 -10.86390 -10.76205 -10.50315 -10.06410 -9.35692 -8.82382 -4.98918 -0.25878 0.39755 1.27284 1.35562 1.52791 1.83192 1.92155 1.95102 2.03182 2.23840 2.67015 2.94071 3.43469 3.45609 3.46884 3.57705 3.61645 3.71737 3.74419 3.77843 3.85296 3.93941 3.98309 4.06470 4.09002 4.11169 4.28506 4.31961 4.34295 4.42643 4.48355 4.54472 4.56402 4.63669 4.74961 4.82372 4.90522 4.98723 5.00625 5.08548 5.14189 5.21583 5.24995 5.43614 5.43728 5.53205 5.58131 5.60692 5.98417 6.34620 6.47673 6.50680 7.25660 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.038 4.038 3 Si 0.684 3.316 4 C -0.206 4.206 5 C 0.074 3.926 6 N -0.584 5.584 7 C 0.082 3.918 8 C -0.056 4.056 9 C -0.121 4.121 10 C 0.564 3.436 11 O -0.537 6.537 12 N -0.723 5.723 13 C 0.143 3.857 14 H 0.094 0.906 15 C -0.124 4.124 16 C -0.110 4.110 17 C 0.077 3.923 18 H 0.075 0.925 19 O -0.379 6.379 20 C 0.404 3.596 21 F -0.208 7.208 22 F -0.207 7.207 23 C -0.141 4.141 24 C -0.127 4.127 25 C -0.113 4.113 26 C -0.072 4.072 27 C -0.063 4.063 28 H 0.374 0.626 29 H 0.115 0.885 30 H -0.256 1.256 31 H -0.260 1.260 32 H 0.176 0.824 33 H 0.422 0.578 34 H 0.136 0.864 35 H 0.401 0.599 36 H 0.081 0.919 37 H 0.073 0.927 38 H 0.079 0.921 39 H 0.080 0.920 40 H 0.168 0.832 41 H 0.077 0.923 42 H 0.079 0.921 43 H 0.067 0.933 44 H 0.076 0.924 45 H 0.126 0.874 46 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.580 1.522 -1.035 1.929 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.148 4.148 3 Si 0.585 3.415 4 C -0.214 4.214 5 C -0.055 4.055 6 N -0.186 5.186 7 C -0.025 4.025 8 C -0.078 4.078 9 C -0.125 4.125 10 C 0.352 3.648 11 O -0.414 6.414 12 N -0.375 5.375 13 C 0.039 3.961 14 H 0.112 0.888 15 C -0.162 4.162 16 C -0.148 4.148 17 C 0.021 3.979 18 H 0.093 0.907 19 O -0.300 6.300 20 C 0.312 3.688 21 F -0.191 7.191 22 F -0.189 7.189 23 C -0.180 4.180 24 C -0.165 4.165 25 C -0.133 4.133 26 C -0.090 4.090 27 C -0.068 4.068 28 H 0.221 0.779 29 H 0.133 0.867 30 H -0.180 1.180 31 H -0.185 1.185 32 H 0.193 0.807 33 H 0.260 0.740 34 H 0.154 0.846 35 H 0.237 0.763 36 H 0.100 0.900 37 H 0.091 0.909 38 H 0.098 0.902 39 H 0.098 0.902 40 H 0.184 0.816 41 H 0.096 0.904 42 H 0.097 0.903 43 H 0.085 0.915 44 H 0.095 0.905 45 H 0.144 0.856 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 0.772 1.909 -0.551 2.131 hybrid contribution -0.797 0.080 0.233 0.834 sum -0.024 1.989 -0.318 2.014 Atomic orbital electron populations 1.86609 1.18062 1.79931 1.49075 1.24288 0.83389 1.09889 0.97243 0.95168 0.91503 0.74306 0.80523 1.20666 1.10604 0.92080 0.98068 1.21822 0.99718 0.94493 0.89444 1.41724 1.54643 1.04037 1.18164 1.18082 1.03300 0.86290 0.94800 1.20075 0.99469 0.88076 1.00155 1.19431 1.04958 0.92334 0.95827 1.18161 0.77459 0.84543 0.84587 1.90797 1.44238 1.86212 1.20203 1.45942 1.64487 1.05865 1.21164 1.21063 0.94785 0.80239 1.00037 0.88835 1.21780 0.99606 0.94021 1.00823 1.21505 0.94761 0.95446 1.03089 1.22412 0.96773 0.80363 0.98392 0.90661 1.88441 1.62272 1.25161 1.54159 1.23204 0.73975 0.94659 0.76941 1.93067 1.89295 1.96455 1.40235 1.93069 1.42777 1.86768 1.96274 1.22126 0.99649 0.94431 1.01756 1.21881 0.97234 0.95795 1.01618 1.20686 1.00592 0.97335 0.94714 1.20207 0.98643 0.90475 0.99719 1.19166 1.01030 0.93028 0.93565 0.77883 0.86714 1.18047 1.18504 0.80706 0.74019 0.84634 0.76337 0.90039 0.90856 0.90193 0.90183 0.81566 0.90390 0.90266 0.91452 0.90509 0.85648 0.85157 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.53 12.88 -35.23 -0.45 -0.98 16 2 C -0.04 0.02 3.06 36.00 0.11 0.13 16 3 Si 0.68 -1.35 30.82 -169.99 -5.24 -6.58 16 4 C -0.21 0.02 5.57 -102.74 -0.57 -0.55 16 5 C 0.07 -0.13 10.43 -16.78 -0.18 -0.30 16 6 N -0.58 0.78 6.07 -10.68 -0.06 0.71 16 7 C 0.08 0.10 7.26 -84.00 -0.61 -0.51 16 8 C -0.06 -0.11 9.61 -39.03 -0.37 -0.48 16 9 C -0.12 -0.21 5.87 -104.95 -0.62 -0.83 16 10 C 0.56 1.52 7.72 -12.45 -0.10 1.43 16 11 O -0.54 -3.32 15.98 5.28 0.08 -3.24 16 12 N -0.72 0.17 5.02 -54.83 -0.28 -0.10 16 13 C 0.14 -0.03 2.45 -67.93 -0.17 -0.20 16 14 H 0.09 0.15 7.58 -51.93 -0.39 -0.24 16 15 C -0.12 0.27 5.39 -26.73 -0.14 0.12 16 16 C -0.11 0.14 5.57 -26.73 -0.15 -0.01 16 17 C 0.08 -0.01 2.40 -26.73 -0.06 -0.07 16 18 H 0.08 0.00 7.20 -51.93 -0.37 -0.38 16 19 O -0.38 -0.24 10.29 -35.23 -0.36 -0.60 16 20 C 0.40 -0.25 6.26 101.05 0.63 0.38 16 21 F -0.21 -0.22 16.63 2.25 0.04 -0.18 16 22 F -0.21 -0.24 15.46 2.25 0.03 -0.20 16 23 C -0.14 -0.05 5.39 -26.73 -0.14 -0.19 16 24 C -0.13 -0.02 5.49 -26.73 -0.15 -0.17 16 25 C -0.11 -0.01 9.46 -39.57 -0.37 -0.38 16 26 C -0.07 -0.06 10.03 -39.69 -0.40 -0.45 16 27 C -0.06 -0.09 6.35 -105.05 -0.67 -0.76 16 28 H 0.37 -0.67 8.70 45.56 0.40 -0.27 16 29 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 30 H -0.26 -0.43 7.11 56.52 0.40 -0.02 16 31 H -0.26 0.17 7.00 56.52 0.40 0.57 16 32 H 0.18 -0.78 6.27 -52.48 -0.33 -1.11 16 33 H 0.42 -1.68 8.96 -40.82 -0.37 -2.05 16 34 H 0.14 0.25 7.62 -52.48 -0.40 -0.16 16 35 H 0.40 -1.09 6.59 -40.82 -0.27 -1.36 16 36 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 37 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 38 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 39 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.17 -0.73 8.14 -51.93 -0.42 -1.16 16 41 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 42 H 0.08 0.08 6.50 -51.93 -0.34 -0.26 16 43 H 0.07 -0.03 8.14 -51.92 -0.42 -0.45 16 44 H 0.08 0.16 8.14 -51.93 -0.42 -0.27 16 45 H 0.13 -0.34 6.36 -52.49 -0.33 -0.68 16 46 H 0.13 -0.05 8.06 -52.49 -0.42 -0.47 16 LS Contribution 382.52 15.07 5.76 5.76 Total: 0.00 -9.52 382.52 -10.26 -19.78 By element: Atomic # 1 Polarization: -5.68 SS G_CDS: -5.83 Total: -11.51 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: -3.96 Total: -2.84 kcal Atomic # 7 Polarization: 0.95 SS G_CDS: -0.34 Total: 0.61 kcal Atomic # 8 Polarization: -4.09 SS G_CDS: -0.73 Total: -4.83 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.07 Total: -0.39 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: -5.24 Total: -6.58 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -9.52 -10.26 -19.78 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -149.575 kcal (2) G-P(sol) polarization free energy of solvation -9.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -159.092 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.259 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.776 kcal (6) G-S(sol) free energy of system = (1) + (5) -169.351 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds