Wall clock time and date at job start Tue Mar 9 2021 13:25:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86304 * 109.47111 * 2 1 4 4 C 1.50693 * 109.47196 * 120.00635 * 2 1 3 5 5 C 1.34459 * 126.47993 * 255.02473 * 4 2 1 6 6 N 1.36560 * 109.98329 * 179.97438 * 5 4 2 7 7 C 1.37830 * 109.86383 * 359.97438 * 6 5 4 8 8 C 1.38640 * 133.37985 * 180.02562 * 7 6 5 9 9 C 1.39321 * 119.66388 * 179.97438 * 8 7 6 10 10 C 1.47585 * 119.83012 * 179.97438 * 9 8 7 11 11 O 1.21592 * 120.00276 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99886 * 179.97438 * 10 9 8 13 13 C 1.46496 * 119.99942 * 180.02562 * 12 10 9 14 14 H 1.08995 * 109.47253 * 35.00473 * 13 12 10 15 15 C 1.53004 * 109.47166 * 155.00604 * 13 12 10 16 16 C 1.53003 * 109.47082 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47067 * 299.99504 * 16 15 13 18 18 H 1.08995 * 109.47413 * 300.00319 * 17 16 15 19 19 O 1.42897 * 109.47053 * 179.97438 * 17 16 15 20 20 C 1.42893 * 113.99970 * 150.00089 * 19 17 16 21 21 F 1.39902 * 109.47329 * 300.00260 * 20 19 17 22 22 F 1.39910 * 109.47119 * 60.00526 * 20 19 17 23 23 C 1.53004 * 109.46764 * 60.00301 * 17 16 15 24 24 C 1.52998 * 109.47376 * 299.99833 * 23 17 16 25 25 C 1.40195 * 120.33832 * 359.97438 * 9 8 7 26 26 C 1.36238 * 120.37716 * 0.03792 * 25 9 8 27 27 C 1.39879 * 119.95806 * 0.23967 * 26 25 9 28 28 H 0.96697 * 113.99971 * 299.99790 * 1 2 3 29 29 H 1.09002 * 109.47180 * 240.00668 * 2 1 3 30 30 H 1.48496 * 110.00302 * 300.00674 * 3 2 1 31 31 H 1.48504 * 109.99633 * 61.32327 * 3 2 1 32 32 H 1.08003 * 125.00972 * 359.94131 * 5 4 2 33 33 H 0.97005 * 125.06625 * 179.97438 * 6 5 4 34 34 H 1.08003 * 120.16907 * 0.02562 * 8 7 6 35 35 H 0.97002 * 119.99670 * 0.02562 * 12 10 9 36 36 H 1.08997 * 109.46695 * 299.99969 * 15 13 12 37 37 H 1.08995 * 109.47141 * 59.99800 * 15 13 12 38 38 H 1.08996 * 109.46764 * 59.99748 * 16 15 13 39 39 H 1.08994 * 109.46682 * 179.97438 * 16 15 13 40 40 H 1.08999 * 109.47342 * 180.02562 * 20 19 17 41 41 H 1.09003 * 109.47305 * 60.00106 * 23 17 16 42 42 H 1.09007 * 109.46737 * 179.97438 * 23 17 16 43 43 H 1.09008 * 109.47021 * 299.99929 * 24 23 17 44 44 H 1.09005 * 109.47248 * 180.02562 * 24 23 17 45 45 H 1.07996 * 119.81423 * 180.02562 * 25 9 8 46 46 H 1.08002 * 120.01783 * 179.97438 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 2.4612 -0.1364 2.3247 6 7 2.8027 -1.0948 3.2355 7 6 2.4936 -2.3433 2.7399 8 6 2.6292 -3.6279 3.2432 9 6 2.2107 -4.7154 2.4795 10 6 2.3538 -6.0846 3.0115 11 8 2.8364 -6.2614 4.1135 12 7 1.9496 -7.1391 2.2758 13 6 2.0912 -8.4981 2.8041 14 1 1.9280 -8.4879 3.8817 15 6 1.0598 -9.4132 2.1407 16 6 1.2081 -10.8327 2.6920 17 6 2.6164 -11.3511 2.3937 18 1 2.7792 -11.3610 1.3161 19 8 2.7550 -12.6767 2.9091 20 6 3.6665 -13.4942 2.1725 21 9 3.2253 -13.6096 0.8499 22 9 4.9373 -12.9092 2.1909 23 6 3.6477 -10.4360 3.0571 24 6 3.4995 -9.0165 2.5059 25 6 1.6543 -4.5158 1.2083 26 6 1.5176 -3.2568 0.7061 27 6 1.9384 -2.1551 1.4584 28 1 -0.3933 0.4417 0.7650 29 1 1.7923 -0.5137 -0.8901 30 1 1.5614 2.4680 -1.2084 31 1 1.5879 2.4585 1.2243 32 1 2.5972 0.9261 2.4627 33 1 3.2031 -0.9227 4.1021 34 1 3.0563 -3.7848 4.2227 35 1 1.5650 -6.9980 1.3966 36 1 0.0566 -9.0436 2.3528 37 1 1.2230 -9.4234 1.0631 38 1 1.0453 -10.8227 3.7697 39 1 0.4731 -11.4844 2.2198 40 1 3.7153 -14.4840 2.6265 41 1 3.4849 -10.4262 4.1348 42 1 4.6510 -10.8057 2.8449 43 1 3.6624 -9.0264 1.4281 44 1 4.2345 -8.3647 2.9781 45 1 1.3323 -5.3648 0.6237 46 1 1.0886 -3.1097 -0.2741 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100670_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:03 Heat of formation + Delta-G solvation = -169.845478 kcal Electronic energy + Delta-G solvation = -32528.313146 eV Core-core repulsion = 27633.749709 eV Total energy + Delta-G solvation = -4894.563437 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.143 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -50.06989 -48.18437 -42.46643 -41.24889 -39.95022 -38.09154 -37.73912 -37.41919 -34.88434 -33.26417 -31.94856 -31.16204 -30.71805 -29.49983 -26.56732 -26.33713 -24.85372 -23.93847 -23.61671 -23.00104 -21.53783 -21.16767 -20.78154 -19.48653 -19.31226 -18.80802 -18.64650 -18.34797 -17.85695 -17.24975 -16.96791 -16.51547 -16.28386 -16.02963 -15.77069 -15.65261 -15.61369 -15.25885 -15.06347 -15.00315 -14.83081 -14.77191 -14.62036 -14.48371 -14.39508 -14.19691 -13.89239 -13.72151 -13.43205 -13.26630 -13.06224 -12.87023 -12.62399 -12.49739 -12.42507 -12.24378 -12.20419 -11.98699 -11.77206 -11.54411 -11.16416 -11.03524 -10.78668 -10.44978 -10.17695 -9.36521 -8.79762 -4.83453 -0.32224 0.37983 1.38834 1.40046 1.64264 1.85741 1.89410 2.01968 2.05499 2.25943 2.73132 2.87160 3.47464 3.52532 3.56027 3.60097 3.70222 3.72335 3.81809 3.85713 3.91323 3.95572 3.99768 4.05453 4.12223 4.15385 4.28383 4.31114 4.37458 4.47492 4.51176 4.56388 4.60310 4.68073 4.79667 4.83250 4.97525 4.97995 5.04004 5.05588 5.13063 5.20403 5.23082 5.40644 5.42815 5.52542 5.60334 5.61932 5.98432 6.46551 6.51519 6.62403 7.13791 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.048 4.048 3 Si 0.772 3.228 4 C -0.224 4.224 5 C 0.090 3.910 6 N -0.577 5.577 7 C 0.067 3.933 8 C -0.068 4.068 9 C -0.136 4.136 10 C 0.562 3.438 11 O -0.581 6.581 12 N -0.707 5.707 13 C 0.144 3.856 14 H 0.071 0.929 15 C -0.115 4.115 16 C -0.107 4.107 17 C 0.076 3.924 18 H 0.077 0.923 19 O -0.389 6.389 20 C 0.398 3.602 21 F -0.219 7.219 22 F -0.220 7.220 23 C -0.137 4.137 24 C -0.120 4.120 25 C -0.107 4.107 26 C -0.083 4.083 27 C -0.080 4.080 28 H 0.384 0.616 29 H 0.114 0.886 30 H -0.308 1.308 31 H -0.269 1.269 32 H 0.207 0.793 33 H 0.434 0.566 34 H 0.127 0.873 35 H 0.415 0.585 36 H 0.092 0.908 37 H 0.090 0.910 38 H 0.073 0.927 39 H 0.089 0.911 40 H 0.207 0.793 41 H 0.067 0.933 42 H 0.070 0.930 43 H 0.078 0.922 44 H 0.053 0.947 45 H 0.153 0.847 46 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.124 1.806 -1.807 2.558 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.157 4.157 3 Si 0.677 3.323 4 C -0.232 4.232 5 C -0.040 4.040 6 N -0.180 5.180 7 C -0.040 4.040 8 C -0.089 4.089 9 C -0.140 4.140 10 C 0.351 3.649 11 O -0.462 6.462 12 N -0.359 5.359 13 C 0.040 3.960 14 H 0.090 0.910 15 C -0.153 4.153 16 C -0.146 4.146 17 C 0.019 3.981 18 H 0.095 0.905 19 O -0.311 6.311 20 C 0.307 3.693 21 F -0.201 7.201 22 F -0.202 7.202 23 C -0.175 4.175 24 C -0.159 4.159 25 C -0.126 4.126 26 C -0.102 4.102 27 C -0.085 4.085 28 H 0.232 0.768 29 H 0.132 0.868 30 H -0.237 1.237 31 H -0.195 1.195 32 H 0.223 0.777 33 H 0.274 0.726 34 H 0.145 0.855 35 H 0.254 0.746 36 H 0.110 0.890 37 H 0.109 0.891 38 H 0.092 0.908 39 H 0.107 0.893 40 H 0.223 0.777 41 H 0.086 0.914 42 H 0.089 0.911 43 H 0.097 0.903 44 H 0.072 0.928 45 H 0.171 0.829 46 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 0.312 2.162 -1.323 2.553 hybrid contribution -0.659 0.017 0.447 0.797 sum -0.347 2.178 -0.876 2.373 Atomic orbital electron populations 1.86572 1.19152 1.80466 1.49921 1.24553 0.82716 1.11286 0.97126 0.94159 0.90008 0.71189 0.76984 1.20754 1.11940 0.91487 0.98987 1.22289 0.97692 0.95576 0.88422 1.41805 1.54141 1.03318 1.18784 1.18123 1.03932 0.86774 0.95151 1.20128 0.99903 0.88852 1.00059 1.19466 1.06105 0.91702 0.96738 1.18391 0.76909 0.85434 0.84163 1.90769 1.46488 1.86828 1.22156 1.45831 1.63362 1.05306 1.21410 1.21035 0.95254 0.80568 0.99148 0.91046 1.21737 0.99247 0.92815 1.01504 1.21506 0.94173 0.96002 1.02873 1.22452 0.97169 0.80168 0.98286 0.90463 1.88435 1.62581 1.25398 1.54651 1.23852 0.73081 0.95827 0.76576 1.93043 1.89378 1.96489 1.41172 1.93043 1.43663 1.87162 1.96300 1.22057 0.99552 0.94683 1.01222 1.21799 0.96924 0.95234 1.01964 1.20910 0.99552 0.98165 0.94019 1.20420 0.98905 0.90639 1.00205 1.19547 1.00966 0.94178 0.93786 0.76751 0.86827 1.23664 1.19486 0.77673 0.72602 0.85496 0.74628 0.88988 0.89106 0.90844 0.89266 0.77737 0.91404 0.91100 0.90315 0.92812 0.82940 0.84222 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.12 12.88 -148.98 -1.92 -3.04 16 2 C -0.05 0.08 3.06 71.23 0.22 0.30 16 3 Si 0.77 -3.66 30.82 68.60 2.11 -1.54 16 4 C -0.22 0.16 5.57 -18.65 -0.10 0.05 16 5 C 0.09 -0.43 10.43 83.09 0.87 0.44 16 6 N -0.58 1.75 6.07 -187.72 -1.14 0.61 16 7 C 0.07 0.20 7.26 38.95 0.28 0.49 16 8 C -0.07 -0.37 9.61 22.63 0.22 -0.16 16 9 C -0.14 -0.64 5.87 -20.07 -0.12 -0.75 16 10 C 0.56 3.91 7.72 86.71 0.67 4.58 16 11 O -0.58 -8.77 15.98 -4.01 -0.06 -8.84 16 12 N -0.71 0.03 5.02 -445.65 -2.24 -2.21 16 13 C 0.14 0.05 2.45 44.99 0.11 0.16 16 14 H 0.07 0.38 7.58 -2.39 -0.02 0.36 16 15 C -0.12 0.58 5.39 30.60 0.16 0.74 16 16 C -0.11 0.30 5.57 30.59 0.17 0.47 16 17 C 0.08 0.00 2.40 30.59 0.07 0.08 16 18 H 0.08 -0.03 7.20 -2.39 -0.02 -0.04 16 19 O -0.39 -0.50 10.29 -148.98 -1.53 -2.03 16 20 C 0.40 -0.61 6.26 113.37 0.71 0.10 16 21 F -0.22 -0.40 16.63 44.97 0.75 0.35 16 22 F -0.22 -0.59 15.46 44.97 0.70 0.11 16 23 C -0.14 -0.27 5.39 30.59 0.16 -0.11 16 24 C -0.12 -0.19 5.49 30.59 0.17 -0.03 16 25 C -0.11 -0.02 9.46 22.28 0.21 0.20 16 26 C -0.08 -0.14 10.03 22.20 0.22 0.09 16 27 C -0.08 -0.25 6.35 -20.14 -0.13 -0.38 16 28 H 0.38 -1.42 8.70 -74.06 -0.64 -2.06 16 29 H 0.11 -0.22 7.96 -2.39 -0.02 -0.24 16 30 H -0.31 -1.29 7.11 99.48 0.71 -0.58 16 31 H -0.27 0.87 7.00 99.48 0.70 1.57 16 32 H 0.21 -2.37 6.27 -2.91 -0.02 -2.38 16 33 H 0.43 -3.63 8.96 -92.70 -0.83 -4.47 16 34 H 0.13 0.80 7.62 -2.91 -0.02 0.77 16 35 H 0.42 -2.58 6.59 -92.71 -0.61 -3.19 16 36 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 37 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 38 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 39 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 40 H 0.21 -2.05 8.14 -2.39 -0.02 -2.07 16 41 H 0.07 0.26 8.14 -2.39 -0.02 0.24 16 42 H 0.07 0.26 6.50 -2.38 -0.02 0.24 16 43 H 0.08 -0.06 8.14 -2.38 -0.02 -0.08 16 44 H 0.05 0.35 8.14 -2.38 -0.02 0.33 16 45 H 0.15 -1.01 6.36 -2.91 -0.02 -1.03 16 46 H 0.14 -0.12 8.06 -2.91 -0.02 -0.15 16 Total: 0.00 -24.55 382.52 -0.43 -24.97 By element: Atomic # 1 Polarization: -13.65 SS G_CDS: -0.99 Total: -14.64 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: 3.90 Total: 6.26 kcal Atomic # 7 Polarization: 1.78 SS G_CDS: -3.38 Total: -1.60 kcal Atomic # 8 Polarization: -10.40 SS G_CDS: -3.52 Total: -13.91 kcal Atomic # 9 Polarization: -0.98 SS G_CDS: 1.44 Total: 0.46 kcal Atomic # 14 Polarization: -3.66 SS G_CDS: 2.11 Total: -1.54 kcal Total: -24.55 -0.43 -24.97 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -144.872 kcal (2) G-P(sol) polarization free energy of solvation -24.547 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -169.418 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.427 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.974 kcal (6) G-S(sol) free energy of system = (1) + (5) -169.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds