Wall clock time and date at job start Tue Mar 9 2021 13:25:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86309 * 109.47033 * 2 1 4 4 C 1.50695 * 109.47314 * 120.00105 * 2 1 3 5 5 C 1.38329 * 119.92133 * 245.00201 * 4 2 1 6 6 C 1.38469 * 120.27833 * 179.97438 * 5 4 2 7 7 Br 1.89101 * 119.93106 * 180.02562 * 6 5 4 8 8 C 1.38017 * 120.12957 * 0.02562 * 6 5 4 9 9 C 1.39591 * 119.84248 * 0.02562 * 8 6 5 10 10 C 1.47849 * 120.14108 * 180.02562 * 9 8 6 11 11 O 1.21553 * 119.99954 * 180.02562 * 10 9 8 12 12 N 1.34777 * 119.99699 * 0.27735 * 10 9 8 13 13 C 1.46505 * 119.99724 * 179.72334 * 12 10 9 14 14 H 1.09002 * 109.47181 * 34.99973 * 13 12 10 15 15 C 1.52995 * 109.47024 * 155.00353 * 13 12 10 16 16 C 1.52998 * 109.47152 * 180.02562 * 15 13 12 17 17 C 1.53001 * 109.47229 * 299.99860 * 16 15 13 18 18 H 1.09008 * 109.47263 * 300.00030 * 17 16 15 19 19 O 1.42895 * 109.47500 * 180.02562 * 17 16 15 20 20 C 1.42897 * 114.00336 * 149.99860 * 19 17 16 21 21 F 1.39897 * 109.47301 * 300.00187 * 20 19 17 22 22 F 1.39907 * 109.47076 * 60.00112 * 20 19 17 23 23 C 1.53006 * 109.47065 * 59.99697 * 17 16 15 24 24 C 1.52998 * 109.47344 * 300.00232 * 23 17 16 25 25 C 1.37983 * 119.92359 * 65.32106 * 4 2 1 26 26 H 0.96696 * 113.99921 * 299.99676 * 1 2 3 27 27 H 1.09000 * 109.47131 * 240.00545 * 2 1 3 28 28 H 1.48493 * 109.99963 * 178.67918 * 3 2 1 29 29 H 1.48493 * 109.99840 * 299.99972 * 3 2 1 30 30 H 1.07992 * 119.85738 * 0.02562 * 5 4 2 31 31 H 1.08002 * 120.08024 * 179.97438 * 8 6 5 32 32 H 0.97000 * 120.00483 * 359.72766 * 12 10 9 33 33 H 1.09001 * 109.46956 * 299.99857 * 15 13 12 34 34 H 1.09002 * 109.47452 * 59.99785 * 15 13 12 35 35 H 1.09002 * 109.47122 * 59.99578 * 16 15 13 36 36 H 1.09002 * 109.47259 * 179.97438 * 16 15 13 37 37 H 1.09002 * 109.47522 * 179.97438 * 20 19 17 38 38 H 1.09001 * 109.46752 * 60.00753 * 23 17 16 39 39 H 1.09001 * 109.47081 * 180.02562 * 23 17 16 40 40 H 1.09002 * 109.47122 * 300.00150 * 24 23 17 41 41 H 1.08991 * 109.46988 * 179.97438 * 24 23 17 42 42 H 1.07996 * 120.06287 * 359.97438 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6390 -0.0102 2.1908 6 6 3.1036 -0.6555 3.3245 7 35 4.0694 0.3114 4.6315 8 6 2.8632 -2.0028 3.5023 9 6 2.1505 -2.7147 2.5359 10 6 1.8887 -4.1582 2.7200 11 8 1.2683 -4.7757 1.8766 12 7 2.3336 -4.7881 3.8253 13 6 2.0690 -6.2171 4.0105 14 1 2.0988 -6.7205 3.0441 15 6 3.1329 -6.8176 4.9315 16 6 2.8569 -8.3101 5.1244 17 6 1.4744 -8.4960 5.7531 18 1 1.4441 -7.9930 6.7197 19 8 1.2168 -9.8899 5.9339 20 6 0.3675 -10.1848 7.0446 21 9 0.9612 -9.7186 8.2224 22 9 -0.8696 -9.5562 6.8655 23 6 0.4104 -7.8954 4.8321 24 6 0.6864 -6.4029 4.6391 25 6 1.6901 -2.0592 1.3932 26 1 -0.3933 0.4416 0.7650 27 1 1.7923 -0.5137 -0.8900 28 1 3.5345 1.7704 0.0322 29 1 1.5615 2.4679 -1.2084 30 1 2.8293 1.0443 2.0562 31 1 3.2263 -2.5054 4.3866 32 1 2.8290 -4.2955 4.4981 33 1 4.1177 -6.6856 4.4834 34 1 3.1030 -6.3143 5.8979 35 1 2.8871 -8.8131 4.1579 36 1 3.6151 -8.7380 5.7802 37 1 0.2203 -11.2626 7.1134 38 1 0.4406 -8.3985 3.8656 39 1 -0.5745 -8.0274 5.2802 40 1 0.6562 -5.8999 5.6057 41 1 -0.0713 -5.9753 3.9827 42 1 1.1415 -2.6054 0.6402 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100670_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:28 Heat of formation + Delta-G solvation = -199.409664 kcal Electronic energy + Delta-G solvation = -29872.211197 eV Core-core repulsion = 25113.963568 eV Total energy + Delta-G solvation = -4758.247629 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.042 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -50.10026 -48.20051 -41.71690 -40.61647 -39.65072 -37.84288 -37.64564 -35.02697 -33.68142 -33.12086 -32.03642 -30.54311 -30.03114 -27.10793 -26.57893 -25.31190 -24.02385 -23.13245 -22.87386 -21.57291 -21.18195 -19.49929 -19.18248 -18.81378 -18.67743 -18.06887 -17.67384 -17.43753 -16.76382 -16.44489 -16.34806 -16.07186 -15.73716 -15.63400 -15.28178 -15.14793 -15.01390 -14.90902 -14.63559 -14.49782 -14.31412 -14.28842 -14.13023 -13.77320 -13.48275 -13.39144 -13.36945 -13.04669 -12.91151 -12.49753 -12.32926 -12.24709 -12.07837 -12.00529 -11.98915 -11.61923 -11.52424 -11.17595 -11.06522 -10.61793 -10.37635 -10.16056 -9.98085 -5.16812 -0.55879 -0.23233 0.34663 1.11718 1.49548 1.55495 1.79008 1.86759 1.98940 2.45507 2.63534 3.17106 3.25890 3.37613 3.39367 3.43804 3.56125 3.68502 3.71354 3.79017 3.87623 3.89750 3.92400 3.99250 4.02793 4.14863 4.18102 4.23767 4.27612 4.41768 4.43724 4.56570 4.67634 4.74463 4.83799 4.87185 4.93968 4.99218 5.02776 5.09078 5.13310 5.29603 5.37262 5.53463 6.29664 6.43432 7.04062 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.067 4.067 3 Si 0.682 3.318 4 C -0.119 4.119 5 C -0.063 4.063 6 C -0.095 4.095 7 Br -0.032 7.032 8 C -0.054 4.054 9 C -0.128 4.128 10 C 0.562 3.438 11 O -0.524 6.524 12 N -0.722 5.722 13 C 0.143 3.857 14 H 0.095 0.905 15 C -0.124 4.124 16 C -0.110 4.110 17 C 0.077 3.923 18 H 0.075 0.925 19 O -0.378 6.378 20 C 0.404 3.596 21 F -0.208 7.208 22 F -0.207 7.207 23 C -0.142 4.142 24 C -0.127 4.127 25 C -0.017 4.017 26 H 0.381 0.619 27 H 0.120 0.880 28 H -0.253 1.253 29 H -0.248 1.248 30 H 0.142 0.858 31 H 0.139 0.861 32 H 0.400 0.600 33 H 0.081 0.919 34 H 0.073 0.927 35 H 0.080 0.920 36 H 0.080 0.920 37 H 0.168 0.832 38 H 0.078 0.922 39 H 0.080 0.920 40 H 0.067 0.933 41 H 0.077 0.923 42 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.697 1.325 3.800 4.367 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.178 4.178 3 Si 0.583 3.417 4 C -0.121 4.121 5 C -0.082 4.082 6 C -0.174 4.174 7 Br 0.054 6.946 8 C -0.074 4.074 9 C -0.132 4.132 10 C 0.349 3.651 11 O -0.401 6.401 12 N -0.374 5.374 13 C 0.038 3.962 14 H 0.113 0.887 15 C -0.162 4.162 16 C -0.148 4.148 17 C 0.020 3.980 18 H 0.093 0.907 19 O -0.300 6.300 20 C 0.312 3.688 21 F -0.190 7.190 22 F -0.189 7.189 23 C -0.180 4.180 24 C -0.165 4.165 25 C -0.036 4.036 26 H 0.228 0.772 27 H 0.138 0.862 28 H -0.177 1.177 29 H -0.172 1.172 30 H 0.159 0.841 31 H 0.156 0.844 32 H 0.236 0.764 33 H 0.100 0.900 34 H 0.092 0.908 35 H 0.099 0.901 36 H 0.099 0.901 37 H 0.185 0.815 38 H 0.097 0.903 39 H 0.098 0.902 40 H 0.086 0.914 41 H 0.095 0.905 42 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.256 1.411 2.607 3.725 hybrid contribution 0.001 -0.341 0.269 0.434 sum 2.256 1.070 2.876 3.809 Atomic orbital electron populations 1.86554 1.16533 1.81640 1.49247 1.25085 0.85664 1.10163 0.96870 0.94880 0.81368 0.77601 0.87894 1.20383 0.99807 0.94574 0.97294 1.21201 0.95303 0.99861 0.91847 1.21648 1.04036 0.95108 0.96612 1.96851 1.72454 1.73550 1.51786 1.21281 0.95464 0.92347 0.98334 1.19970 1.02700 0.93801 0.96700 1.18104 0.79012 0.86341 0.81640 1.90830 1.39622 1.66953 1.42683 1.45968 1.57974 1.10867 1.22575 1.21113 0.94501 0.80111 1.00428 0.88663 1.21782 0.99058 0.95305 1.00104 1.21506 0.94928 0.95817 1.02559 1.22410 0.96079 0.79932 0.99539 0.90658 1.88443 1.66883 1.27180 1.47495 1.23210 0.74110 0.96433 0.75021 1.93066 1.84131 1.91455 1.50382 1.93069 1.45218 1.85809 1.94780 1.22125 0.99277 0.95441 1.01132 1.21880 0.97176 0.95948 1.01537 1.21308 0.93567 0.93123 0.95637 0.77197 0.86218 1.17733 1.17246 0.84081 0.84375 0.76447 0.90018 0.90808 0.90145 0.90112 0.81533 0.90328 0.90177 0.91400 0.90454 0.83421 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.23 12.84 -35.23 -0.45 -0.22 16 2 C -0.07 0.07 2.80 36.00 0.10 0.17 16 3 Si 0.68 -1.25 29.79 -169.99 -5.06 -6.32 16 4 C -0.12 0.09 5.34 -104.68 -0.56 -0.47 16 5 C -0.06 0.09 8.41 -39.46 -0.33 -0.24 16 6 C -0.09 0.10 6.22 -39.58 -0.25 -0.14 16 7 Br -0.03 0.03 33.69 -68.01 -2.29 -2.26 16 8 C -0.05 0.08 9.28 -39.16 -0.36 -0.28 16 9 C -0.13 -0.02 5.87 -104.97 -0.62 -0.64 16 10 C 0.56 0.83 7.74 -12.33 -0.10 0.73 16 11 O -0.52 -2.74 16.01 5.32 0.09 -2.65 16 12 N -0.72 0.96 5.03 -54.74 -0.28 0.68 16 13 C 0.14 -0.15 2.45 -67.93 -0.17 -0.32 16 14 H 0.10 0.08 7.58 -51.93 -0.39 -0.32 16 15 C -0.12 0.36 5.39 -26.73 -0.14 0.21 16 16 C -0.11 0.20 5.57 -26.73 -0.15 0.05 16 17 C 0.08 -0.04 2.40 -26.73 -0.06 -0.11 16 18 H 0.08 -0.04 7.20 -51.92 -0.37 -0.42 16 19 O -0.38 -0.09 10.29 -35.23 -0.36 -0.45 16 20 C 0.40 -0.38 6.26 101.05 0.63 0.25 16 21 F -0.21 -0.15 16.63 2.25 0.04 -0.11 16 22 F -0.21 -0.17 15.46 2.25 0.03 -0.13 16 23 C -0.14 0.03 5.39 -26.73 -0.14 -0.11 16 24 C -0.13 0.07 5.50 -26.73 -0.15 -0.08 16 25 C -0.02 -0.01 9.23 -39.18 -0.36 -0.37 16 26 H 0.38 -1.67 8.70 45.56 0.40 -1.27 16 27 H 0.12 -0.09 7.96 -51.93 -0.41 -0.50 16 28 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 29 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 30 H 0.14 -0.42 4.89 -52.49 -0.26 -0.67 16 31 H 0.14 -0.53 6.41 -52.49 -0.34 -0.87 16 32 H 0.40 -1.55 6.64 -40.82 -0.27 -1.82 16 33 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 34 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 35 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 36 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.17 -0.78 8.14 -51.93 -0.42 -1.20 16 38 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 39 H 0.08 0.04 6.50 -51.93 -0.34 -0.29 16 40 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 41 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 42 H 0.15 0.24 7.65 -52.49 -0.40 -0.16 16 LS Contribution 370.47 15.07 5.58 5.58 Total: 0.00 -7.81 370.47 -10.33 -18.14 By element: Atomic # 1 Polarization: -5.95 SS G_CDS: -4.97 Total: -10.92 kcal Atomic # 6 Polarization: 1.31 SS G_CDS: -2.66 Total: -1.35 kcal Atomic # 7 Polarization: 0.96 SS G_CDS: -0.28 Total: 0.68 kcal Atomic # 8 Polarization: -2.60 SS G_CDS: -0.73 Total: -3.33 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.07 Total: -0.25 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.06 Total: -6.32 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -2.29 Total: -2.26 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -7.81 -10.33 -18.14 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -181.267 kcal (2) G-P(sol) polarization free energy of solvation -7.815 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -189.082 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.328 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.143 kcal (6) G-S(sol) free energy of system = (1) + (5) -199.410 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds