Wall clock time and date at job start Tue Mar 9 2021 13:25:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86309 * 109.47033 * 2 1 4 4 C 1.50695 * 109.47314 * 120.00105 * 2 1 3 5 5 C 1.38329 * 119.92133 * 245.00201 * 4 2 1 6 6 C 1.38469 * 120.27833 * 179.97438 * 5 4 2 7 7 Br 1.89101 * 119.93106 * 180.02562 * 6 5 4 8 8 C 1.38017 * 120.12957 * 0.02562 * 6 5 4 9 9 C 1.39591 * 119.84248 * 0.02562 * 8 6 5 10 10 C 1.47849 * 120.14108 * 180.02562 * 9 8 6 11 11 O 1.21553 * 119.99954 * 180.02562 * 10 9 8 12 12 N 1.34777 * 119.99699 * 0.27735 * 10 9 8 13 13 C 1.46505 * 119.99724 * 179.72334 * 12 10 9 14 14 H 1.09002 * 109.47181 * 34.99973 * 13 12 10 15 15 C 1.52995 * 109.47024 * 155.00353 * 13 12 10 16 16 C 1.52998 * 109.47152 * 180.02562 * 15 13 12 17 17 C 1.53001 * 109.47229 * 299.99860 * 16 15 13 18 18 H 1.09008 * 109.47263 * 300.00030 * 17 16 15 19 19 O 1.42895 * 109.47500 * 180.02562 * 17 16 15 20 20 C 1.42897 * 114.00336 * 149.99860 * 19 17 16 21 21 F 1.39897 * 109.47301 * 300.00187 * 20 19 17 22 22 F 1.39907 * 109.47076 * 60.00112 * 20 19 17 23 23 C 1.53006 * 109.47065 * 59.99697 * 17 16 15 24 24 C 1.52998 * 109.47344 * 300.00232 * 23 17 16 25 25 C 1.37983 * 119.92359 * 65.32106 * 4 2 1 26 26 H 0.96696 * 113.99921 * 299.99676 * 1 2 3 27 27 H 1.09000 * 109.47131 * 240.00545 * 2 1 3 28 28 H 1.48493 * 109.99963 * 178.67918 * 3 2 1 29 29 H 1.48493 * 109.99840 * 299.99972 * 3 2 1 30 30 H 1.07992 * 119.85738 * 0.02562 * 5 4 2 31 31 H 1.08002 * 120.08024 * 179.97438 * 8 6 5 32 32 H 0.97000 * 120.00483 * 359.72766 * 12 10 9 33 33 H 1.09001 * 109.46956 * 299.99857 * 15 13 12 34 34 H 1.09002 * 109.47452 * 59.99785 * 15 13 12 35 35 H 1.09002 * 109.47122 * 59.99578 * 16 15 13 36 36 H 1.09002 * 109.47259 * 179.97438 * 16 15 13 37 37 H 1.09002 * 109.47522 * 179.97438 * 20 19 17 38 38 H 1.09001 * 109.46752 * 60.00753 * 23 17 16 39 39 H 1.09001 * 109.47081 * 180.02562 * 23 17 16 40 40 H 1.09002 * 109.47122 * 300.00150 * 24 23 17 41 41 H 1.08991 * 109.46988 * 179.97438 * 24 23 17 42 42 H 1.07996 * 120.06287 * 359.97438 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6390 -0.0102 2.1908 6 6 3.1036 -0.6555 3.3245 7 35 4.0694 0.3114 4.6315 8 6 2.8632 -2.0028 3.5023 9 6 2.1505 -2.7147 2.5359 10 6 1.8887 -4.1582 2.7200 11 8 1.2683 -4.7757 1.8766 12 7 2.3336 -4.7881 3.8253 13 6 2.0690 -6.2171 4.0105 14 1 2.0988 -6.7205 3.0441 15 6 3.1329 -6.8176 4.9315 16 6 2.8569 -8.3101 5.1244 17 6 1.4744 -8.4960 5.7531 18 1 1.4441 -7.9930 6.7197 19 8 1.2168 -9.8899 5.9339 20 6 0.3675 -10.1848 7.0446 21 9 0.9612 -9.7186 8.2224 22 9 -0.8696 -9.5562 6.8655 23 6 0.4104 -7.8954 4.8321 24 6 0.6864 -6.4029 4.6391 25 6 1.6901 -2.0592 1.3932 26 1 -0.3933 0.4416 0.7650 27 1 1.7923 -0.5137 -0.8900 28 1 3.5345 1.7704 0.0322 29 1 1.5615 2.4679 -1.2084 30 1 2.8293 1.0443 2.0562 31 1 3.2263 -2.5054 4.3866 32 1 2.8290 -4.2955 4.4981 33 1 4.1177 -6.6856 4.4834 34 1 3.1030 -6.3143 5.8979 35 1 2.8871 -8.8131 4.1579 36 1 3.6151 -8.7380 5.7802 37 1 0.2203 -11.2626 7.1134 38 1 0.4406 -8.3985 3.8656 39 1 -0.5745 -8.0274 5.2802 40 1 0.6562 -5.8999 5.6057 41 1 -0.0713 -5.9753 3.9827 42 1 1.1415 -2.6054 0.6402 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100670_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:27 Heat of formation + Delta-G solvation = -197.719041 kcal Electronic energy + Delta-G solvation = -29872.137886 eV Core-core repulsion = 25113.963568 eV Total energy + Delta-G solvation = -4758.174318 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.042 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -50.07551 -48.18910 -41.73979 -40.56662 -39.67436 -37.80349 -37.63917 -35.07036 -33.62585 -33.07616 -31.96280 -30.47178 -29.99095 -27.04511 -26.51015 -25.29907 -23.95027 -23.08860 -22.82506 -21.58663 -21.15188 -19.45956 -19.14444 -18.73532 -18.65114 -18.02380 -17.67612 -17.38622 -16.71544 -16.44647 -16.32288 -16.09237 -15.71264 -15.61850 -15.27360 -15.11616 -14.97886 -14.93206 -14.62552 -14.47798 -14.30022 -14.26010 -14.08958 -13.74072 -13.44655 -13.29582 -13.27784 -13.03468 -12.85331 -12.45906 -12.25774 -12.23489 -12.02169 -11.97638 -11.94934 -11.56125 -11.46859 -11.22575 -11.08583 -10.56674 -10.38065 -10.13136 -9.92236 -5.06284 -0.53034 -0.17339 0.42692 1.20435 1.49907 1.59157 1.84065 1.93577 2.06339 2.45128 2.72622 3.26076 3.32966 3.47692 3.51391 3.54536 3.71045 3.77982 3.80067 3.86655 3.92537 3.95317 3.98986 4.03698 4.12924 4.19518 4.25259 4.29506 4.36146 4.47020 4.49354 4.66608 4.74985 4.80383 4.91247 4.96358 5.02518 5.03374 5.06231 5.12521 5.18432 5.32805 5.39250 5.59741 6.34247 6.70547 7.01644 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.075 4.075 3 Si 0.771 3.229 4 C -0.117 4.117 5 C -0.059 4.059 6 C -0.099 4.099 7 Br -0.027 7.027 8 C -0.043 4.043 9 C -0.136 4.136 10 C 0.560 3.440 11 O -0.571 6.571 12 N -0.706 5.706 13 C 0.144 3.856 14 H 0.073 0.927 15 C -0.115 4.115 16 C -0.108 4.108 17 C 0.075 3.925 18 H 0.078 0.922 19 O -0.389 6.389 20 C 0.398 3.602 21 F -0.218 7.218 22 F -0.220 7.220 23 C -0.137 4.137 24 C -0.121 4.121 25 C -0.031 4.031 26 H 0.397 0.603 27 H 0.112 0.888 28 H -0.277 1.277 29 H -0.294 1.294 30 H 0.159 0.841 31 H 0.163 0.837 32 H 0.415 0.585 33 H 0.093 0.907 34 H 0.092 0.908 35 H 0.073 0.927 36 H 0.089 0.911 37 H 0.206 0.794 38 H 0.067 0.933 39 H 0.070 0.930 40 H 0.080 0.920 41 H 0.054 0.946 42 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.863 1.891 5.549 6.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.185 4.185 3 Si 0.676 3.324 4 C -0.118 4.118 5 C -0.078 4.078 6 C -0.179 4.179 7 Br 0.059 6.941 8 C -0.064 4.064 9 C -0.140 4.140 10 C 0.348 3.652 11 O -0.451 6.451 12 N -0.358 5.358 13 C 0.040 3.960 14 H 0.091 0.909 15 C -0.153 4.153 16 C -0.146 4.146 17 C 0.019 3.981 18 H 0.096 0.904 19 O -0.311 6.311 20 C 0.307 3.693 21 F -0.201 7.201 22 F -0.202 7.202 23 C -0.176 4.176 24 C -0.159 4.159 25 C -0.050 4.050 26 H 0.247 0.753 27 H 0.129 0.871 28 H -0.203 1.203 29 H -0.222 1.222 30 H 0.176 0.824 31 H 0.181 0.819 32 H 0.254 0.746 33 H 0.111 0.889 34 H 0.110 0.890 35 H 0.091 0.909 36 H 0.107 0.893 37 H 0.222 0.778 38 H 0.086 0.914 39 H 0.089 0.911 40 H 0.098 0.902 41 H 0.073 0.927 42 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 3.430 1.969 4.417 5.929 hybrid contribution -0.386 -0.519 -0.296 0.711 sum 3.044 1.450 4.121 5.325 Atomic orbital electron populations 1.86515 1.16877 1.82167 1.50526 1.25259 0.85592 1.11086 0.96549 0.93880 0.78335 0.74672 0.85515 1.20334 0.99952 0.93966 0.97567 1.21377 0.94457 1.00608 0.91404 1.21746 1.04044 0.95297 0.96764 1.96867 1.72307 1.73426 1.51502 1.21468 0.94259 0.92240 0.98410 1.19870 1.03710 0.93145 0.97247 1.18359 0.78396 0.86835 0.81628 1.90807 1.41925 1.67986 1.44427 1.45849 1.57054 1.10815 1.22050 1.21068 0.95007 0.80108 0.99846 0.90892 1.21743 0.98613 0.94516 1.00455 1.21509 0.94338 0.96514 1.02227 1.22463 0.96444 0.79777 0.99442 0.90423 1.88437 1.67114 1.27474 1.48054 1.23845 0.73274 0.97953 0.74257 1.93042 1.84298 1.91744 1.50971 1.93043 1.46039 1.86259 1.94823 1.22059 0.99210 0.95630 1.00683 1.21799 0.96875 0.95688 1.01570 1.21263 0.94197 0.93815 0.95758 0.75286 0.87094 1.20315 1.22153 0.82447 0.81910 0.74634 0.88873 0.88988 0.90866 0.89256 0.77790 0.91432 0.91101 0.90167 0.92735 0.85320 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.04 12.84 -148.98 -1.91 -1.87 16 2 C -0.08 0.11 2.80 71.23 0.20 0.30 16 3 Si 0.77 -2.82 29.79 68.60 2.04 -0.78 16 4 C -0.12 0.13 5.34 -19.90 -0.11 0.02 16 5 C -0.06 0.21 8.41 22.35 0.19 0.40 16 6 C -0.10 0.33 6.22 22.27 0.14 0.47 16 7 Br -0.03 0.10 33.69 -20.37 -0.69 -0.59 16 8 C -0.04 0.17 9.28 22.54 0.21 0.38 16 9 C -0.14 -0.13 5.87 -20.09 -0.12 -0.25 16 10 C 0.56 2.35 7.74 86.79 0.67 3.02 16 11 O -0.57 -7.49 16.01 -3.88 -0.06 -7.56 16 12 N -0.71 1.85 5.03 -445.38 -2.24 -0.39 16 13 C 0.14 -0.22 2.45 44.99 0.11 -0.11 16 14 H 0.07 0.25 7.58 -2.39 -0.02 0.24 16 15 C -0.12 0.77 5.39 30.59 0.16 0.94 16 16 C -0.11 0.43 5.57 30.59 0.17 0.60 16 17 C 0.08 -0.07 2.40 30.60 0.07 0.00 16 18 H 0.08 -0.11 7.20 -2.38 -0.02 -0.13 16 19 O -0.39 -0.21 10.29 -148.98 -1.53 -1.74 16 20 C 0.40 -0.86 6.26 113.37 0.71 -0.15 16 21 F -0.22 -0.24 16.63 44.97 0.75 0.51 16 22 F -0.22 -0.45 15.46 44.97 0.70 0.25 16 23 C -0.14 -0.12 5.39 30.60 0.17 0.04 16 24 C -0.12 0.00 5.50 30.60 0.17 0.17 16 25 C -0.03 -0.08 9.23 22.53 0.21 0.13 16 26 H 0.40 -3.40 8.70 -74.06 -0.64 -4.05 16 27 H 0.11 0.00 7.96 -2.39 -0.02 -0.02 16 28 H -0.28 -0.11 7.11 99.48 0.71 0.60 16 29 H -0.29 -1.19 7.11 99.48 0.71 -0.48 16 30 H 0.16 -1.14 4.89 -2.91 -0.01 -1.16 16 31 H 0.16 -1.58 6.41 -2.91 -0.02 -1.60 16 32 H 0.42 -3.78 6.64 -92.71 -0.62 -4.39 16 33 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 34 H 0.09 -0.90 8.14 -2.39 -0.02 -0.92 16 35 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 36 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 37 H 0.21 -2.15 8.14 -2.39 -0.02 -2.16 16 38 H 0.07 0.20 8.14 -2.39 -0.02 0.18 16 39 H 0.07 0.19 6.50 -2.39 -0.02 0.18 16 40 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 41 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 42 H 0.13 0.80 7.65 -2.91 -0.02 0.78 16 Total: 0.00 -20.49 370.47 -0.12 -20.61 By element: Atomic # 1 Polarization: -14.26 SS G_CDS: -0.13 Total: -14.38 kcal Atomic # 6 Polarization: 3.00 SS G_CDS: 2.95 Total: 5.95 kcal Atomic # 7 Polarization: 1.85 SS G_CDS: -2.24 Total: -0.39 kcal Atomic # 8 Polarization: -7.66 SS G_CDS: -3.51 Total: -11.17 kcal Atomic # 9 Polarization: -0.69 SS G_CDS: 1.44 Total: 0.75 kcal Atomic # 14 Polarization: -2.82 SS G_CDS: 2.04 Total: -0.78 kcal Atomic # 35 Polarization: 0.10 SS G_CDS: -0.69 Total: -0.59 kcal Total: -20.49 -0.12 -20.61 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -177.108 kcal (2) G-P(sol) polarization free energy of solvation -20.490 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -197.598 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.121 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.611 kcal (6) G-S(sol) free energy of system = (1) + (5) -197.719 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds