Wall clock time and date at job start Tue Mar 9 2021 13:25:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.47353 * 2 1 4 4 C 1.50697 * 109.47286 * 120.00229 * 2 1 3 5 5 C 1.37819 * 119.94107 * 14.97668 * 4 2 1 6 6 C 1.39671 * 119.88077 * 179.74817 * 5 4 2 7 7 C 1.47727 * 120.11352 * 180.27177 * 6 5 4 8 8 O 1.21565 * 120.00686 * 0.27896 * 7 6 5 9 9 N 1.34779 * 119.99548 * 180.27246 * 7 6 5 10 10 C 1.46495 * 120.00314 * 180.02562 * 9 7 6 11 11 H 1.09010 * 109.46632 * 325.00253 * 10 9 7 12 12 C 1.53000 * 109.47262 * 84.99863 * 10 9 7 13 13 C 1.52995 * 109.47240 * 180.02562 * 12 10 9 14 14 C 1.53003 * 109.47315 * 300.00368 * 13 12 10 15 15 H 1.09005 * 109.46528 * 300.00051 * 14 13 12 16 16 O 1.42899 * 109.47175 * 180.02562 * 14 13 12 17 17 C 1.42899 * 114.00245 * 90.00175 * 16 14 13 18 18 F 1.39899 * 109.46696 * 299.99344 * 17 16 14 19 19 F 1.39891 * 109.47444 * 59.99379 * 17 16 14 20 20 C 1.53000 * 109.47267 * 59.99648 * 14 13 12 21 21 C 1.52994 * 109.47569 * 205.00592 * 10 9 7 22 22 C 1.39624 * 119.76419 * 0.55028 * 6 5 4 23 23 C 1.37863 * 119.88068 * 359.44949 * 22 6 5 24 24 C 1.38633 * 120.11623 * 0.27337 * 23 22 6 25 25 F 1.35101 * 119.88256 * 179.97438 * 24 23 22 26 26 H 0.96701 * 113.99876 * 300.00108 * 1 2 3 27 27 H 1.09004 * 109.47495 * 240.00103 * 2 1 3 28 28 H 1.48501 * 110.00220 * 300.00253 * 3 2 1 29 29 H 1.48501 * 109.99999 * 61.32016 * 3 2 1 30 30 H 1.08002 * 120.05553 * 359.97438 * 5 4 2 31 31 H 0.97005 * 120.00118 * 0.02562 * 9 7 6 32 32 H 1.09004 * 109.47132 * 300.00535 * 12 10 9 33 33 H 1.08993 * 109.46908 * 60.00496 * 12 10 9 34 34 H 1.09000 * 109.47279 * 179.97438 * 13 12 10 35 35 H 1.09005 * 109.47364 * 59.99906 * 13 12 10 36 36 H 1.08996 * 109.46983 * 179.97438 * 17 16 14 37 37 H 1.08994 * 109.47353 * 180.02562 * 20 14 13 38 38 H 1.08993 * 109.46908 * 60.00325 * 20 14 13 39 39 H 1.09010 * 109.46867 * 299.99517 * 21 10 9 40 40 H 1.09000 * 109.47441 * 59.99313 * 21 10 9 41 41 H 1.08002 * 120.06329 * 179.73186 * 22 6 5 42 42 H 1.07999 * 119.94211 * 180.25876 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.0730 -1.4943 1.9708 6 6 1.5412 -2.1564 3.1079 7 6 0.6270 -3.0027 3.9019 8 8 -0.5337 -3.1280 3.5631 9 7 1.0800 -3.6362 5.0019 10 6 0.1738 -4.4760 5.7891 11 1 -0.8250 -4.0393 5.7810 12 6 0.1218 -5.8792 5.1815 13 6 -0.8251 -6.7560 6.0032 14 6 -0.3185 -6.8426 7.4443 15 1 0.6802 -7.2794 7.4526 16 8 -1.2026 -7.6621 8.2116 17 6 -0.8565 -9.0485 8.2123 18 9 -0.8769 -9.5349 6.9008 19 9 0.4253 -9.2089 8.7492 20 6 -0.2665 -5.4394 8.0519 21 6 0.6809 -4.5625 7.2299 22 6 2.8748 -2.0109 3.4949 23 6 3.7250 -1.2243 2.7471 24 6 3.2565 -0.5740 1.6160 25 9 4.0936 0.1960 0.8870 26 1 -0.3933 0.4417 0.7651 27 1 1.7924 -0.5138 -0.8900 28 1 1.5615 2.4679 -1.2085 29 1 1.5880 2.4585 1.2243 30 1 0.0410 -1.5993 1.6700 31 1 2.0062 -3.5361 5.2725 32 1 -0.2395 -5.8175 4.1549 33 1 1.1205 -6.3157 5.1895 34 1 -0.8625 -7.7556 5.5701 35 1 -1.8238 -6.3193 5.9949 36 1 -1.5751 -9.6021 8.8167 37 1 0.0948 -5.5011 9.0783 38 1 -1.2651 -5.0027 8.0435 39 1 1.6797 -4.9991 7.2380 40 1 0.7179 -3.5628 7.6628 41 1 3.2409 -2.5172 4.3758 42 1 4.7578 -1.1144 3.0432 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100670_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:46 Heat of formation + Delta-G solvation = -246.642782 kcal Electronic energy + Delta-G solvation = -30308.954298 eV Core-core repulsion = 25419.022515 eV Total energy + Delta-G solvation = -4889.931783 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.122 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -50.39444 -50.11033 -48.21017 -41.61350 -40.46494 -39.53323 -37.89911 -37.64541 -34.98822 -32.89327 -32.12767 -32.02996 -29.96541 -27.20200 -26.50725 -25.09355 -24.03073 -23.35640 -23.12431 -21.57735 -21.23271 -19.57344 -19.31024 -18.88862 -18.68642 -18.62518 -18.14548 -17.84144 -17.11844 -17.09816 -16.52701 -16.17399 -16.05966 -15.83096 -15.71613 -15.36146 -15.25019 -15.16278 -14.97989 -14.65449 -14.49961 -14.39829 -14.33414 -14.18341 -13.89544 -13.76812 -13.49007 -13.45278 -13.39059 -12.92178 -12.81987 -12.49514 -12.44145 -12.33606 -12.08191 -11.91501 -11.62650 -11.20473 -11.12445 -10.96242 -10.25604 -10.11280 -9.82202 -4.79443 -0.57400 -0.09263 1.18142 1.57164 1.62200 1.79847 1.93973 2.00248 2.53046 2.62792 2.84884 3.09836 3.25502 3.37269 3.39490 3.47663 3.54189 3.57362 3.71360 3.79410 3.87704 3.90402 3.98217 4.01799 4.02497 4.21092 4.26558 4.34854 4.41805 4.46465 4.55631 4.67264 4.73904 4.75148 4.82699 4.92416 4.93638 4.96757 5.02051 5.08635 5.13190 5.34016 5.49628 5.52644 6.27824 6.32149 7.07135 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.527 6.527 2 C -0.074 4.074 3 Si 0.677 3.323 4 C -0.154 4.154 5 C -0.024 4.024 6 C -0.141 4.141 7 C 0.562 3.438 8 O -0.527 6.527 9 N -0.723 5.723 10 C 0.143 3.857 11 H 0.095 0.905 12 C -0.127 4.127 13 C -0.142 4.142 14 C 0.077 3.923 15 H 0.075 0.925 16 O -0.378 6.378 17 C 0.404 3.596 18 F -0.207 7.207 19 F -0.208 7.208 20 C -0.110 4.110 21 C -0.124 4.124 22 C -0.061 4.061 23 C -0.149 4.149 24 C 0.123 3.877 25 F -0.104 7.104 26 H 0.378 0.622 27 H 0.128 0.872 28 H -0.248 1.248 29 H -0.256 1.256 30 H 0.154 0.846 31 H 0.400 0.600 32 H 0.077 0.923 33 H 0.067 0.933 34 H 0.079 0.921 35 H 0.078 0.922 36 H 0.168 0.832 37 H 0.080 0.920 38 H 0.080 0.920 39 H 0.073 0.927 40 H 0.081 0.919 41 H 0.138 0.862 42 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.707 -0.240 4.057 6.219 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.183 4.183 3 Si 0.575 3.425 4 C -0.156 4.156 5 C -0.043 4.043 6 C -0.145 4.145 7 C 0.349 3.651 8 O -0.404 6.404 9 N -0.375 5.375 10 C 0.038 3.962 11 H 0.113 0.887 12 C -0.165 4.165 13 C -0.180 4.180 14 C 0.020 3.980 15 H 0.093 0.907 16 O -0.300 6.300 17 C 0.312 3.688 18 F -0.189 7.189 19 F -0.190 7.190 20 C -0.148 4.148 21 C -0.162 4.162 22 C -0.080 4.080 23 C -0.168 4.168 24 C 0.103 3.897 25 F -0.083 7.083 26 H 0.226 0.774 27 H 0.145 0.855 28 H -0.173 1.173 29 H -0.180 1.180 30 H 0.171 0.829 31 H 0.235 0.765 32 H 0.095 0.905 33 H 0.086 0.914 34 H 0.098 0.902 35 H 0.097 0.903 36 H 0.185 0.815 37 H 0.099 0.901 38 H 0.099 0.901 39 H 0.092 0.908 40 H 0.100 0.900 41 H 0.156 0.844 42 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 3.634 0.286 3.320 4.931 hybrid contribution -0.067 -0.352 0.386 0.527 sum 3.567 -0.066 3.706 5.144 Atomic orbital electron populations 1.86612 1.17030 1.80107 1.49519 1.24946 0.84576 1.11206 0.97560 0.94762 0.92728 0.73529 0.81445 1.20394 0.92929 1.02089 1.00141 1.20982 1.00952 0.91136 0.91212 1.19983 0.94323 1.01994 0.98163 1.18131 0.87321 0.79242 0.80421 1.90826 1.17710 1.62893 1.68978 1.45954 1.14499 1.49453 1.27545 1.21098 0.94925 0.90502 0.89631 0.88708 1.21878 1.00125 0.94211 1.00335 1.22126 1.00438 1.01589 0.93844 1.22408 0.93110 0.91584 0.90850 0.90671 1.88444 1.53569 1.16577 1.71418 1.23206 0.82359 0.84043 0.79158 1.93067 1.96654 1.88257 1.40893 1.93064 1.44649 1.95338 1.85995 1.21513 1.01264 0.92378 0.99667 1.21788 0.99649 1.01038 0.93727 1.21178 0.91888 0.96203 0.98686 1.21092 1.01843 0.99104 0.94738 1.17652 0.87254 0.93241 0.91538 1.91197 1.69778 1.71286 1.75999 0.77390 0.85458 1.17317 1.18002 0.82865 0.76458 0.90480 0.91432 0.90198 0.90339 0.81532 0.90127 0.90143 0.90842 0.90028 0.84407 0.83271 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.72 11.64 -35.23 -0.41 -1.13 16 2 C -0.07 -0.01 2.96 36.00 0.11 0.10 16 3 Si 0.68 0.05 29.57 -169.99 -5.03 -4.98 16 4 C -0.15 0.00 5.13 -104.61 -0.54 -0.54 16 5 C -0.02 -0.02 8.78 -39.20 -0.34 -0.36 16 6 C -0.14 0.01 5.87 -104.97 -0.62 -0.60 16 7 C 0.56 0.71 7.73 -12.38 -0.10 0.62 16 8 O -0.53 -2.73 16.01 5.31 0.08 -2.64 16 9 N -0.72 1.23 5.03 -54.79 -0.28 0.96 16 10 C 0.14 -0.18 2.45 -67.94 -0.17 -0.35 16 11 H 0.09 0.06 7.58 -51.92 -0.39 -0.33 16 12 C -0.13 0.08 5.49 -26.73 -0.15 -0.07 16 13 C -0.14 0.04 5.39 -26.73 -0.14 -0.11 16 14 C 0.08 -0.05 2.40 -26.73 -0.06 -0.12 16 15 H 0.08 -0.05 7.20 -51.93 -0.37 -0.43 16 16 O -0.38 -0.06 10.29 -35.23 -0.36 -0.42 16 17 C 0.40 -0.41 6.26 101.05 0.63 0.22 16 18 F -0.21 -0.16 15.46 2.25 0.03 -0.13 16 19 F -0.21 -0.13 16.63 2.25 0.04 -0.09 16 20 C -0.11 0.22 5.58 -26.71 -0.15 0.07 16 21 C -0.12 0.39 5.39 -26.71 -0.14 0.25 16 22 C -0.06 0.16 9.54 -39.20 -0.37 -0.21 16 23 C -0.15 0.38 10.01 -39.57 -0.40 -0.02 16 24 C 0.12 -0.12 6.67 -39.27 -0.26 -0.38 16 25 F -0.10 0.14 13.70 2.25 0.03 0.17 16 26 H 0.38 -0.54 8.43 45.56 0.38 -0.16 16 27 H 0.13 -0.07 7.96 -51.93 -0.41 -0.48 16 28 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 29 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 30 H 0.15 0.26 6.66 -52.49 -0.35 -0.09 16 31 H 0.40 -1.83 6.63 -40.82 -0.27 -2.10 16 32 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 33 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 34 H 0.08 0.04 6.50 -51.93 -0.34 -0.29 16 35 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 36 H 0.17 -0.79 8.14 -51.93 -0.42 -1.21 16 37 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 38 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 39 H 0.07 -0.30 8.14 -51.92 -0.42 -0.72 16 40 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 41 H 0.14 -0.80 6.40 -52.49 -0.34 -1.14 16 42 H 0.15 -0.71 8.06 -52.49 -0.42 -1.13 16 LS Contribution 352.77 15.07 5.32 5.32 Total: 0.00 -7.77 352.77 -8.36 -16.13 By element: Atomic # 1 Polarization: -6.58 SS G_CDS: -5.09 Total: -11.68 kcal Atomic # 6 Polarization: 1.20 SS G_CDS: -2.70 Total: -1.50 kcal Atomic # 7 Polarization: 1.23 SS G_CDS: -0.28 Total: 0.96 kcal Atomic # 8 Polarization: -3.51 SS G_CDS: -0.69 Total: -4.20 kcal Atomic # 9 Polarization: -0.15 SS G_CDS: 0.10 Total: -0.05 kcal Atomic # 14 Polarization: 0.05 SS G_CDS: -5.03 Total: -4.98 kcal Total LS contribution 5.32 Total: 5.32 kcal Total: -7.77 -8.36 -16.13 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -230.512 kcal (2) G-P(sol) polarization free energy of solvation -7.767 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -238.279 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.364 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.130 kcal (6) G-S(sol) free energy of system = (1) + (5) -246.643 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds