Wall clock time and date at job start Tue Mar 9 2021 13:25:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.47353 * 2 1 4 4 C 1.50697 * 109.47286 * 120.00229 * 2 1 3 5 5 C 1.37819 * 119.94107 * 14.97668 * 4 2 1 6 6 C 1.39671 * 119.88077 * 179.74817 * 5 4 2 7 7 C 1.47727 * 120.11352 * 180.27177 * 6 5 4 8 8 O 1.21565 * 120.00686 * 0.27896 * 7 6 5 9 9 N 1.34779 * 119.99548 * 180.27246 * 7 6 5 10 10 C 1.46495 * 120.00314 * 180.02562 * 9 7 6 11 11 H 1.09010 * 109.46632 * 325.00253 * 10 9 7 12 12 C 1.53000 * 109.47262 * 84.99863 * 10 9 7 13 13 C 1.52995 * 109.47240 * 180.02562 * 12 10 9 14 14 C 1.53003 * 109.47315 * 300.00368 * 13 12 10 15 15 H 1.09005 * 109.46528 * 300.00051 * 14 13 12 16 16 O 1.42899 * 109.47175 * 180.02562 * 14 13 12 17 17 C 1.42899 * 114.00245 * 90.00175 * 16 14 13 18 18 F 1.39899 * 109.46696 * 299.99344 * 17 16 14 19 19 F 1.39891 * 109.47444 * 59.99379 * 17 16 14 20 20 C 1.53000 * 109.47267 * 59.99648 * 14 13 12 21 21 C 1.52994 * 109.47569 * 205.00592 * 10 9 7 22 22 C 1.39624 * 119.76419 * 0.55028 * 6 5 4 23 23 C 1.37863 * 119.88068 * 359.44949 * 22 6 5 24 24 C 1.38633 * 120.11623 * 0.27337 * 23 22 6 25 25 F 1.35101 * 119.88256 * 179.97438 * 24 23 22 26 26 H 0.96701 * 113.99876 * 300.00108 * 1 2 3 27 27 H 1.09004 * 109.47495 * 240.00103 * 2 1 3 28 28 H 1.48501 * 110.00220 * 300.00253 * 3 2 1 29 29 H 1.48501 * 109.99999 * 61.32016 * 3 2 1 30 30 H 1.08002 * 120.05553 * 359.97438 * 5 4 2 31 31 H 0.97005 * 120.00118 * 0.02562 * 9 7 6 32 32 H 1.09004 * 109.47132 * 300.00535 * 12 10 9 33 33 H 1.08993 * 109.46908 * 60.00496 * 12 10 9 34 34 H 1.09000 * 109.47279 * 179.97438 * 13 12 10 35 35 H 1.09005 * 109.47364 * 59.99906 * 13 12 10 36 36 H 1.08996 * 109.46983 * 179.97438 * 17 16 14 37 37 H 1.08994 * 109.47353 * 180.02562 * 20 14 13 38 38 H 1.08993 * 109.46908 * 60.00325 * 20 14 13 39 39 H 1.09010 * 109.46867 * 299.99517 * 21 10 9 40 40 H 1.09000 * 109.47441 * 59.99313 * 21 10 9 41 41 H 1.08002 * 120.06329 * 179.73186 * 22 6 5 42 42 H 1.07999 * 119.94211 * 180.25876 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.0730 -1.4943 1.9708 6 6 1.5412 -2.1564 3.1079 7 6 0.6270 -3.0027 3.9019 8 8 -0.5337 -3.1280 3.5631 9 7 1.0800 -3.6362 5.0019 10 6 0.1738 -4.4760 5.7891 11 1 -0.8250 -4.0393 5.7810 12 6 0.1218 -5.8792 5.1815 13 6 -0.8251 -6.7560 6.0032 14 6 -0.3185 -6.8426 7.4443 15 1 0.6802 -7.2794 7.4526 16 8 -1.2026 -7.6621 8.2116 17 6 -0.8565 -9.0485 8.2123 18 9 -0.8769 -9.5349 6.9008 19 9 0.4253 -9.2089 8.7492 20 6 -0.2665 -5.4394 8.0519 21 6 0.6809 -4.5625 7.2299 22 6 2.8748 -2.0109 3.4949 23 6 3.7250 -1.2243 2.7471 24 6 3.2565 -0.5740 1.6160 25 9 4.0936 0.1960 0.8870 26 1 -0.3933 0.4417 0.7651 27 1 1.7924 -0.5138 -0.8900 28 1 1.5615 2.4679 -1.2085 29 1 1.5880 2.4585 1.2243 30 1 0.0410 -1.5993 1.6700 31 1 2.0062 -3.5361 5.2725 32 1 -0.2395 -5.8175 4.1549 33 1 1.1205 -6.3157 5.1895 34 1 -0.8625 -7.7556 5.5701 35 1 -1.8238 -6.3193 5.9949 36 1 -1.5751 -9.6021 8.8167 37 1 0.0948 -5.5011 9.0783 38 1 -1.2651 -5.0027 8.0435 39 1 1.6797 -4.9991 7.2380 40 1 0.7179 -3.5628 7.6628 41 1 3.2409 -2.5172 4.3758 42 1 4.7578 -1.1144 3.0432 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100670_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:45 Heat of formation + Delta-G solvation = -245.540998 kcal Electronic energy + Delta-G solvation = -30308.906521 eV Core-core repulsion = 25419.022515 eV Total energy + Delta-G solvation = -4889.884006 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.122 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -50.27870 -50.07843 -48.19155 -41.61187 -40.39424 -39.54720 -37.90288 -37.65927 -35.00822 -32.83096 -32.03811 -31.94362 -29.90526 -27.16865 -26.42235 -25.05151 -23.93810 -23.26179 -23.06429 -21.57081 -21.18222 -19.52287 -19.25595 -18.79678 -18.65270 -18.55652 -18.10465 -17.84318 -17.07122 -17.03664 -16.50715 -16.19265 -16.07470 -15.80682 -15.66664 -15.33894 -15.15190 -15.12125 -14.96612 -14.63360 -14.46536 -14.32784 -14.25311 -14.23167 -13.91825 -13.72034 -13.44579 -13.39398 -13.26316 -12.89948 -12.79845 -12.48348 -12.44373 -12.24639 -12.02404 -11.95235 -11.54973 -11.27051 -11.09505 -11.00560 -10.26560 -10.03457 -9.74670 -4.85435 -0.50301 0.01489 1.15700 1.49469 1.60045 1.84497 1.90116 2.08063 2.57930 2.72669 2.95076 3.14808 3.31679 3.46916 3.52076 3.58483 3.66754 3.71670 3.81314 3.93640 3.97501 4.00656 4.04393 4.11200 4.14532 4.28001 4.36815 4.40415 4.49757 4.59084 4.68044 4.79466 4.81791 4.89672 4.96781 5.00645 5.03350 5.05363 5.07885 5.14804 5.19913 5.39188 5.60179 5.62089 6.31352 6.41884 7.09034 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.080 4.080 3 Si 0.747 3.253 4 C -0.164 4.164 5 C -0.041 4.041 6 C -0.154 4.154 7 C 0.558 3.442 8 O -0.578 6.578 9 N -0.705 5.705 10 C 0.144 3.856 11 H 0.070 0.930 12 C -0.121 4.121 13 C -0.138 4.138 14 C 0.075 3.925 15 H 0.078 0.922 16 O -0.389 6.389 17 C 0.398 3.602 18 F -0.220 7.220 19 F -0.218 7.218 20 C -0.108 4.108 21 C -0.114 4.114 22 C -0.046 4.046 23 C -0.141 4.141 24 C 0.119 3.881 25 F -0.100 7.100 26 H 0.387 0.613 27 H 0.133 0.867 28 H -0.291 1.291 29 H -0.284 1.284 30 H 0.133 0.867 31 H 0.417 0.583 32 H 0.051 0.949 33 H 0.081 0.919 34 H 0.069 0.931 35 H 0.066 0.934 36 H 0.206 0.794 37 H 0.089 0.911 38 H 0.071 0.929 39 H 0.093 0.907 40 H 0.094 0.906 41 H 0.176 0.824 42 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.120 -0.536 5.745 9.164 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.189 4.189 3 Si 0.650 3.350 4 C -0.165 4.165 5 C -0.060 4.060 6 C -0.157 4.157 7 C 0.347 3.653 8 O -0.458 6.458 9 N -0.357 5.357 10 C 0.040 3.960 11 H 0.089 0.911 12 C -0.160 4.160 13 C -0.176 4.176 14 C 0.019 3.981 15 H 0.096 0.904 16 O -0.311 6.311 17 C 0.307 3.693 18 F -0.202 7.202 19 F -0.200 7.200 20 C -0.146 4.146 21 C -0.152 4.152 22 C -0.064 4.064 23 C -0.160 4.160 24 C 0.099 3.901 25 F -0.079 7.079 26 H 0.236 0.764 27 H 0.150 0.850 28 H -0.218 1.218 29 H -0.210 1.210 30 H 0.151 0.849 31 H 0.256 0.744 32 H 0.070 0.930 33 H 0.099 0.901 34 H 0.088 0.912 35 H 0.084 0.916 36 H 0.222 0.778 37 H 0.108 0.892 38 H 0.090 0.910 39 H 0.112 0.888 40 H 0.113 0.887 41 H 0.193 0.807 42 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges 6.093 -0.027 5.038 7.906 hybrid contribution -0.850 -0.263 -0.144 0.901 sum 5.244 -0.290 4.894 7.179 Atomic orbital electron populations 1.86573 1.17990 1.80466 1.50308 1.25082 0.83950 1.11593 0.98267 0.94109 0.91527 0.71839 0.77519 1.20308 0.93616 1.02525 1.00038 1.20876 1.00378 0.92391 0.92317 1.19961 0.95440 1.02286 0.98009 1.18430 0.86856 0.79198 0.80835 1.90803 1.19902 1.64755 1.70383 1.45800 1.15283 1.48227 1.26363 1.21037 0.94222 0.89741 0.91032 0.91144 1.21798 1.00505 0.94791 0.98859 1.22062 1.00015 1.00907 0.94662 1.22468 0.92997 0.92371 0.90279 0.90355 1.88439 1.53995 1.17270 1.71415 1.23835 0.82628 0.83887 0.78972 1.93041 1.96696 1.88370 1.42081 1.93040 1.45593 1.95356 1.86037 1.21523 1.01282 0.91604 1.00235 1.21746 1.00101 1.01702 0.91642 1.21545 0.90263 0.95288 0.99327 1.21472 1.03223 0.97746 0.93513 1.17813 0.86774 0.93392 0.92126 1.91198 1.69448 1.71173 1.76055 0.76368 0.84960 1.21806 1.21016 0.84929 0.74363 0.92986 0.90073 0.91218 0.91569 0.77825 0.89220 0.90979 0.88826 0.88743 0.80682 0.80144 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.68 11.64 -148.98 -1.73 -4.41 16 2 C -0.08 -0.13 2.96 71.23 0.21 0.09 16 3 Si 0.75 0.86 29.57 68.60 2.03 2.89 16 4 C -0.16 -0.11 5.13 -19.86 -0.10 -0.21 16 5 C -0.04 -0.13 8.78 22.52 0.20 0.07 16 6 C -0.15 0.01 5.87 -20.09 -0.12 -0.11 16 7 C 0.56 1.95 7.73 86.75 0.67 2.62 16 8 O -0.58 -7.59 16.01 -3.92 -0.06 -7.66 16 9 N -0.70 2.80 5.03 -445.52 -2.24 0.56 16 10 C 0.14 -0.32 2.45 44.99 0.11 -0.21 16 11 H 0.07 0.23 7.58 -2.38 -0.02 0.21 16 12 C -0.12 0.03 5.49 30.59 0.17 0.20 16 13 C -0.14 -0.11 5.39 30.59 0.16 0.05 16 14 C 0.08 -0.10 2.40 30.60 0.07 -0.03 16 15 H 0.08 -0.15 7.20 -2.38 -0.02 -0.17 16 16 O -0.39 -0.13 10.29 -148.98 -1.53 -1.66 16 17 C 0.40 -0.93 6.26 113.37 0.71 -0.22 16 18 F -0.22 -0.43 15.46 44.97 0.70 0.26 16 19 F -0.22 -0.17 16.63 44.97 0.75 0.57 16 20 C -0.11 0.50 5.58 30.61 0.17 0.67 16 21 C -0.11 0.88 5.39 30.61 0.17 1.05 16 22 C -0.05 0.35 9.54 22.52 0.21 0.57 16 23 C -0.14 1.08 10.01 22.28 0.22 1.31 16 24 C 0.12 -0.35 6.67 22.47 0.15 -0.20 16 25 F -0.10 0.40 13.70 44.97 0.62 1.02 16 26 H 0.39 -0.12 8.43 -74.06 -0.62 -0.75 16 27 H 0.13 -0.01 7.96 -2.39 -0.02 -0.03 16 28 H -0.29 -2.29 7.11 99.48 0.71 -1.58 16 29 H -0.28 -1.60 7.11 99.48 0.71 -0.89 16 30 H 0.13 0.89 6.66 -2.91 -0.02 0.87 16 31 H 0.42 -4.84 6.63 -92.70 -0.61 -5.45 16 32 H 0.05 0.26 8.14 -2.39 -0.02 0.24 16 33 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 34 H 0.07 0.19 6.50 -2.39 -0.02 0.18 16 35 H 0.07 0.20 8.14 -2.38 -0.02 0.18 16 36 H 0.21 -2.17 8.14 -2.39 -0.02 -2.19 16 37 H 0.09 -0.53 8.14 -2.39 -0.02 -0.55 16 38 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 39 H 0.09 -1.04 8.14 -2.38 -0.02 -1.06 16 40 H 0.09 -0.90 8.14 -2.39 -0.02 -0.92 16 41 H 0.18 -2.77 6.40 -2.91 -0.02 -2.79 16 42 H 0.18 -2.49 8.06 -2.91 -0.02 -2.51 16 Total: 0.00 -21.90 352.77 1.42 -20.48 By element: Atomic # 1 Polarization: -17.56 SS G_CDS: -0.11 Total: -17.67 kcal Atomic # 6 Polarization: 2.62 SS G_CDS: 3.01 Total: 5.63 kcal Atomic # 7 Polarization: 2.80 SS G_CDS: -2.24 Total: 0.56 kcal Atomic # 8 Polarization: -10.40 SS G_CDS: -3.33 Total: -13.73 kcal Atomic # 9 Polarization: -0.21 SS G_CDS: 2.06 Total: 1.85 kcal Atomic # 14 Polarization: 0.86 SS G_CDS: 2.03 Total: 2.89 kcal Total: -21.90 1.42 -20.48 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -225.059 kcal (2) G-P(sol) polarization free energy of solvation -21.899 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -246.958 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.417 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.482 kcal (6) G-S(sol) free energy of system = (1) + (5) -245.541 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds