Wall clock time and date at job start Tue Mar 9 2021 13:25:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86303 * 109.46934 * 2 1 4 4 C 1.50703 * 109.46811 * 119.99674 * 2 1 3 5 5 C 1.34832 * 125.65080 * 65.27742 * 4 2 1 6 6 C 1.40795 * 107.04964 * 180.14040 * 5 4 2 7 7 C 1.36109 * 106.73337 * 359.60553 * 6 5 4 8 8 C 1.47569 * 125.94728 * 180.26566 * 7 6 5 9 9 C 1.39922 * 119.95362 * 359.97438 * 8 7 6 10 10 C 1.36426 * 120.27880 * 180.02562 * 9 8 7 11 11 C 1.39874 * 120.18611 * 359.96090 * 10 9 8 12 12 C 1.47294 * 120.04820 * 180.02562 * 11 10 9 13 13 O 1.21621 * 120.00136 * 180.02562 * 12 11 10 14 14 N 1.34769 * 119.99602 * 359.97438 * 12 11 10 15 15 C 1.46500 * 119.99746 * 180.02562 * 14 12 11 16 16 H 1.09001 * 109.47600 * 34.99949 * 15 14 12 17 17 C 1.53004 * 109.47178 * 154.99931 * 15 14 12 18 18 C 1.53007 * 109.46940 * 179.97438 * 17 15 14 19 19 C 1.52994 * 109.47277 * 300.00005 * 18 17 15 20 20 H 1.09013 * 109.47260 * 300.00277 * 19 18 17 21 21 O 1.42901 * 109.47465 * 180.02562 * 19 18 17 22 22 C 1.42896 * 114.00236 * 149.99935 * 21 19 18 23 23 F 1.39902 * 109.46976 * 300.00179 * 22 21 19 24 24 F 1.39902 * 109.47265 * 60.00257 * 22 21 19 25 25 C 1.52995 * 109.47267 * 60.00033 * 19 18 17 26 26 C 1.53001 * 109.47526 * 300.00022 * 25 19 18 27 27 C 1.40409 * 119.90491 * 0.02562 * 11 10 9 28 28 O 1.35686 * 120.13425 * 180.02562 * 27 11 10 29 29 C 1.38275 * 119.72628 * 359.77326 * 27 11 10 30 30 O 1.34226 * 125.65142 * 244.97710 * 4 2 1 31 31 H 0.96702 * 113.99524 * 59.99666 * 1 2 3 32 32 H 1.08995 * 109.47466 * 240.00217 * 2 1 3 33 33 H 1.48507 * 109.99797 * 59.99949 * 3 2 1 34 34 H 1.48500 * 109.99719 * 181.31616 * 3 2 1 35 35 H 1.08005 * 126.47479 * 359.97438 * 5 4 2 36 36 H 1.08002 * 126.63743 * 179.87482 * 6 5 4 37 37 H 1.07995 * 119.86063 * 359.97438 * 9 8 7 38 38 H 1.07994 * 119.90799 * 179.97438 * 10 9 8 39 39 H 0.97003 * 120.00707 * 0.02562 * 14 12 11 40 40 H 1.08995 * 109.47491 * 299.99738 * 17 15 14 41 41 H 1.09002 * 109.47375 * 60.00098 * 17 15 14 42 42 H 1.08996 * 109.47160 * 60.00259 * 18 17 15 43 43 H 1.09003 * 109.46794 * 179.97438 * 18 17 15 44 44 H 1.08996 * 109.47399 * 180.02562 * 22 21 19 45 45 H 1.09002 * 109.47243 * 59.99837 * 25 19 18 46 46 H 1.09004 * 109.47662 * 180.02562 * 25 19 18 47 47 H 1.09007 * 109.47139 * 300.00232 * 26 25 19 48 48 H 1.08991 * 109.47980 * 179.97438 * 26 25 19 49 49 H 0.96697 * 113.99713 * 90.00169 * 28 27 11 50 50 H 1.08001 * 120.09354 * 180.23118 * 29 27 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 1.7612 -2.0190 1.5069 6 6 2.3802 -2.2627 2.7478 7 6 2.9079 -1.0784 3.1618 8 6 3.6577 -0.8543 4.4129 9 6 3.8783 -1.9175 5.2953 10 6 4.5702 -1.7177 6.4540 11 6 5.0648 -0.4475 6.7676 12 6 5.8119 -0.2353 8.0191 13 8 6.2412 0.8697 8.2912 14 7 6.0188 -1.2653 8.8633 15 6 6.7613 -1.0541 10.1084 16 1 6.5391 -0.0615 10.5001 17 6 6.3482 -2.1114 11.1342 18 6 7.1242 -1.8912 12.4344 19 6 8.6246 -2.0070 12.1586 20 1 8.8465 -2.9998 11.7667 21 8 9.3494 -1.8020 13.3730 22 6 10.5908 -2.5069 13.4351 23 9 10.3528 -3.8810 13.3234 24 9 11.4170 -2.0899 12.3860 25 6 9.0378 -0.9498 11.1328 26 6 8.2619 -1.1699 9.8327 27 6 4.8483 0.6250 5.8876 28 8 5.3265 1.8590 6.1869 29 6 4.1501 0.4173 4.7122 30 8 2.6270 -0.1463 2.2303 31 1 -0.3932 0.4418 -0.7651 32 1 1.7924 -0.5138 -0.8899 33 1 1.5614 2.4679 1.2086 34 1 3.5346 1.7703 -0.0321 35 1 1.2451 -2.7430 0.8937 36 1 2.4307 -3.2077 3.2683 37 1 3.4986 -2.9004 5.0585 38 1 4.7366 -2.5425 7.1309 39 1 5.6760 -2.1465 8.6465 40 1 5.2792 -2.0293 11.3304 41 1 6.5704 -3.1041 10.7425 42 1 6.9023 -0.8986 12.8262 43 1 6.8295 -2.6442 13.1653 44 1 11.0793 -2.2994 14.3871 45 1 8.8159 0.0429 11.5247 46 1 10.1067 -1.0325 10.9360 47 1 8.4837 -2.1626 9.4408 48 1 8.5558 -0.4164 9.1020 49 1 6.2194 2.0258 5.8554 50 1 3.9833 1.2371 4.0293 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100670_12807986.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:59 Heat of formation + Delta-G solvation = -219.395989 kcal Electronic energy + Delta-G solvation = -38242.988762 eV Core-core repulsion = 32646.112040 eV Total energy + Delta-G solvation = -5596.876722 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.147 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -50.09684 -48.19732 -43.77626 -41.66907 -40.53876 -39.42869 -38.09401 -37.85993 -37.57517 -34.92376 -34.26511 -33.44396 -32.01235 -31.42987 -30.80759 -29.74580 -27.11248 -26.35559 -24.58276 -24.12829 -23.97882 -23.29905 -22.37886 -21.76014 -21.41753 -21.21052 -19.75136 -19.39760 -18.95168 -18.76863 -18.67437 -18.58878 -18.01780 -17.60345 -17.08028 -16.67630 -16.57549 -16.35503 -16.03337 -15.98798 -15.89569 -15.68779 -15.46727 -15.08282 -15.02769 -14.83936 -14.61286 -14.55094 -14.40191 -14.34349 -14.18657 -14.10945 -13.94540 -13.75764 -13.62459 -13.54029 -13.45372 -13.36098 -12.86610 -12.79348 -12.72090 -12.46199 -12.30474 -12.10860 -12.05528 -11.84960 -11.59419 -11.16264 -11.12240 -10.77963 -10.73519 -10.51993 -10.10861 -10.00068 -9.04511 -5.15046 -0.82287 0.06915 0.60817 1.08020 1.35015 1.52348 1.62619 1.84144 1.95952 1.97909 2.06001 2.60692 2.64052 2.96273 3.18561 3.39980 3.42288 3.46973 3.55533 3.57025 3.61016 3.73132 3.74492 3.85831 3.89576 3.90675 3.94082 4.01852 4.05110 4.09391 4.18656 4.24544 4.29714 4.33742 4.46712 4.52826 4.59351 4.63411 4.73130 4.76775 4.80920 4.86186 4.95248 4.96770 5.02715 5.04543 5.10086 5.15088 5.16973 5.35067 5.40451 5.44217 5.54814 5.94124 6.40601 6.41807 6.65247 7.19765 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.036 4.036 3 Si 0.706 3.294 4 C -0.002 4.002 5 C -0.168 4.168 6 C -0.175 4.175 7 C 0.021 3.979 8 C 0.031 3.969 9 C -0.115 4.115 10 C -0.063 4.063 11 C -0.165 4.165 12 C 0.560 3.440 13 O -0.515 6.515 14 N -0.725 5.725 15 C 0.143 3.857 16 H 0.094 0.906 17 C -0.124 4.124 18 C -0.110 4.110 19 C 0.077 3.923 20 H 0.075 0.925 21 O -0.378 6.378 22 C 0.404 3.596 23 F -0.209 7.209 24 F -0.207 7.207 25 C -0.142 4.142 26 C -0.126 4.126 27 C 0.179 3.821 28 O -0.474 6.474 29 C -0.142 4.142 30 O -0.169 6.169 31 H 0.391 0.609 32 H 0.096 0.904 33 H -0.248 1.248 34 H -0.252 1.252 35 H 0.158 0.842 36 H 0.159 0.841 37 H 0.140 0.860 38 H 0.137 0.863 39 H 0.399 0.601 40 H 0.081 0.919 41 H 0.072 0.928 42 H 0.080 0.920 43 H 0.080 0.920 44 H 0.168 0.832 45 H 0.078 0.922 46 H 0.079 0.921 47 H 0.066 0.934 48 H 0.076 0.924 49 H 0.399 0.601 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.852 -3.976 -3.877 5.619 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.145 4.145 3 Si 0.605 3.395 4 C -0.052 4.052 5 C -0.187 4.187 6 C -0.194 4.194 7 C -0.028 4.028 8 C 0.030 3.970 9 C -0.133 4.133 10 C -0.082 4.082 11 C -0.169 4.169 12 C 0.347 3.653 13 O -0.391 6.391 14 N -0.378 5.378 15 C 0.039 3.961 16 H 0.112 0.888 17 C -0.162 4.162 18 C -0.148 4.148 19 C 0.021 3.979 20 H 0.093 0.907 21 O -0.300 6.300 22 C 0.312 3.688 23 F -0.191 7.191 24 F -0.189 7.189 25 C -0.180 4.180 26 C -0.165 4.165 27 C 0.133 3.867 28 O -0.285 6.285 29 C -0.161 4.161 30 O -0.066 6.066 31 H 0.240 0.760 32 H 0.114 0.886 33 H -0.172 1.172 34 H -0.177 1.177 35 H 0.176 0.824 36 H 0.176 0.824 37 H 0.158 0.842 38 H 0.155 0.845 39 H 0.234 0.766 40 H 0.100 0.900 41 H 0.091 0.909 42 H 0.099 0.901 43 H 0.098 0.902 44 H 0.185 0.815 45 H 0.097 0.903 46 H 0.097 0.903 47 H 0.085 0.915 48 H 0.094 0.906 49 H 0.257 0.743 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.464 -2.397 -2.282 3.342 hybrid contribution 0.365 -1.531 -0.492 1.649 sum -0.100 -3.928 -2.774 4.810 Atomic orbital electron populations 1.86470 1.16299 1.81987 1.50271 1.23795 0.86215 1.11699 0.92812 0.95275 0.80989 0.76229 0.87039 1.21461 1.00191 0.92620 0.90935 1.21554 1.03623 0.95603 0.97943 1.21911 1.01865 0.98338 0.97256 1.20357 1.04087 0.87598 0.90784 1.17764 0.95423 0.93782 0.90006 1.20701 1.00206 0.98695 0.93745 1.20818 0.95486 0.95513 0.96399 1.20490 1.04661 0.94278 0.97454 1.17951 0.79614 0.84494 0.83202 1.90850 1.49905 1.23443 1.74921 1.45964 1.57694 1.12243 1.21886 1.21070 0.90878 1.00755 0.83379 0.88761 1.21780 1.00978 0.98987 0.94465 1.21507 0.91561 1.04226 0.97528 1.22406 0.92413 0.99381 0.83722 0.90692 1.88445 1.32047 1.69086 1.40426 1.23206 0.81437 0.73521 0.90602 1.93067 1.94438 1.34504 1.97049 1.93066 1.73229 1.89788 1.62808 1.22124 1.01275 1.00004 0.94572 1.21875 0.94185 1.02796 0.97602 1.18272 0.93854 0.84141 0.90471 1.84780 1.36315 1.27595 1.79819 1.21572 1.00468 0.97061 0.97002 1.83961 1.58012 1.38131 1.26543 0.75998 0.88592 1.17230 1.17659 0.82440 0.82353 0.84246 0.84498 0.76609 0.90041 0.90899 0.90149 0.90150 0.81545 0.90337 0.90251 0.91508 0.90569 0.74273 0.84218 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.24 12.86 -35.23 -0.45 -0.22 16 2 C -0.04 0.01 2.98 36.01 0.11 0.12 16 3 Si 0.71 -0.57 32.11 -169.99 -5.46 -6.03 16 4 C 0.00 -0.01 6.24 -35.51 -0.22 -0.23 16 5 C -0.17 -0.32 10.78 -39.82 -0.43 -0.74 16 6 C -0.17 -0.24 10.26 -39.38 -0.40 -0.64 16 7 C 0.02 0.06 7.02 -36.54 -0.26 -0.20 16 8 C 0.03 0.06 5.87 -104.95 -0.62 -0.56 16 9 C -0.12 0.07 9.48 -39.60 -0.38 -0.30 16 10 C -0.06 0.07 9.47 -39.62 -0.38 -0.30 16 11 C -0.17 -0.27 5.89 -104.79 -0.62 -0.89 16 12 C 0.56 1.45 7.72 -12.58 -0.10 1.36 16 13 O -0.52 -3.19 14.80 -16.69 -0.25 -3.44 16 14 N -0.73 0.43 5.02 -54.92 -0.28 0.16 16 15 C 0.14 -0.06 2.46 -67.92 -0.17 -0.23 16 16 H 0.09 0.16 7.58 -51.93 -0.39 -0.23 16 17 C -0.12 0.29 5.39 -26.73 -0.14 0.15 16 18 C -0.11 0.15 5.57 -26.73 -0.15 0.00 16 19 C 0.08 -0.02 2.40 -26.74 -0.06 -0.08 16 20 H 0.08 -0.02 7.20 -51.92 -0.37 -0.39 16 21 O -0.38 -0.21 10.29 -35.23 -0.36 -0.57 16 22 C 0.40 -0.29 6.26 101.05 0.63 0.35 16 23 F -0.21 -0.20 16.63 2.25 0.04 -0.16 16 24 F -0.21 -0.22 15.46 2.25 0.03 -0.18 16 25 C -0.14 -0.02 5.39 -26.73 -0.14 -0.17 16 26 C -0.13 0.01 5.49 -26.73 -0.15 -0.13 16 27 C 0.18 0.51 6.71 -38.75 -0.26 0.25 16 28 O -0.47 -1.66 11.56 -40.72 -0.47 -2.13 16 29 C -0.14 -0.36 9.65 -39.06 -0.38 -0.74 16 30 O -0.17 -0.71 8.79 4.72 0.04 -0.67 16 31 H 0.39 -2.33 8.74 45.56 0.40 -1.93 16 32 H 0.10 -0.29 7.96 -51.93 -0.41 -0.70 16 33 H -0.25 -0.82 7.11 56.52 0.40 -0.42 16 34 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 35 H 0.16 0.00 8.06 -52.48 -0.42 -0.43 16 36 H 0.16 -0.24 7.24 -52.49 -0.38 -0.62 16 37 H 0.14 -0.43 6.95 -52.49 -0.36 -0.80 16 38 H 0.14 -0.61 6.37 -52.49 -0.33 -0.95 16 39 H 0.40 -1.35 6.61 -40.82 -0.27 -1.62 16 40 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 42 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 43 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 44 H 0.17 -0.74 8.14 -51.93 -0.42 -1.17 16 45 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 46 H 0.08 0.07 6.50 -51.93 -0.34 -0.27 16 47 H 0.07 -0.05 8.14 -51.92 -0.42 -0.48 16 48 H 0.08 0.13 8.14 -51.93 -0.42 -0.30 16 49 H 0.40 -0.13 9.06 45.56 0.41 0.28 16 50 H 0.14 0.36 7.90 -52.49 -0.41 -0.06 16 LS Contribution 422.08 15.07 6.36 6.36 Total: 0.00 -12.41 422.08 -10.37 -22.79 By element: Atomic # 1 Polarization: -7.44 SS G_CDS: -5.47 Total: -12.91 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: -4.10 Total: -2.99 kcal Atomic # 7 Polarization: 0.43 SS G_CDS: -0.28 Total: 0.16 kcal Atomic # 8 Polarization: -5.54 SS G_CDS: -1.49 Total: -7.03 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.07 Total: -0.34 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: -5.46 Total: -6.03 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -12.41 -10.37 -22.79 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_12807986.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -196.611 kcal (2) G-P(sol) polarization free energy of solvation -12.415 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -209.025 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.371 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.785 kcal (6) G-S(sol) free energy of system = (1) + (5) -219.396 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds