Wall clock time and date at job start Tue Mar 9 2021 12:53:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35986 * 117.00210 * 2 1 4 4 C 1.39154 * 120.07816 * 180.27376 * 3 2 1 5 5 O 1.35998 * 120.06881 * 359.97438 * 4 3 2 6 6 C 1.42901 * 116.99835 * 180.27433 * 5 4 3 7 7 C 1.50702 * 109.46852 * 179.97438 * 6 5 4 8 8 O 1.21274 * 120.00344 * 0.02562 * 7 6 5 9 9 N 1.34783 * 119.99815 * 179.97438 * 7 6 5 10 10 C 1.46498 * 119.99762 * 180.02562 * 9 7 6 11 11 H 1.08997 * 109.47244 * 324.99535 * 10 9 7 12 12 C 1.52994 * 109.47423 * 85.00280 * 10 9 7 13 13 C 1.52999 * 109.47453 * 179.97438 * 12 10 9 14 14 C 1.53004 * 109.46760 * 299.99844 * 13 12 10 15 15 H 1.08997 * 109.46911 * 299.99598 * 14 13 12 16 16 O 1.42899 * 109.46769 * 179.97438 * 14 13 12 17 17 C 1.42905 * 114.00131 * 89.99945 * 16 14 13 18 18 F 1.39904 * 109.47085 * 300.00277 * 17 16 14 19 19 F 1.39902 * 109.47066 * 59.99675 * 17 16 14 20 20 C 1.52994 * 109.47010 * 59.99885 * 14 13 12 21 21 C 1.52999 * 109.47453 * 299.99691 * 20 14 13 22 22 C 1.38561 * 119.85745 * 180.25254 * 4 3 2 23 23 C 1.38246 * 119.99934 * 359.74833 * 22 4 3 24 24 N 1.48001 * 119.92721 * 180.02562 * 23 22 4 25 25 O 1.21797 * 120.00287 * 359.97438 * 24 23 22 26 26 O 1.21807 * 119.99868 * 179.97438 * 24 23 22 27 27 C 1.38250 * 120.14480 * 359.97438 * 23 22 4 28 28 C 1.50702 * 119.92814 * 180.02562 * 27 23 22 29 29 O 1.42902 * 109.46783 * 74.97565 * 28 27 23 30 30 Si 1.86295 * 109.47474 * 194.97793 * 28 27 23 31 31 C 1.38248 * 120.14902 * 0.02562 * 27 23 22 32 32 H 1.09000 * 109.47742 * 59.99781 * 1 2 3 33 33 H 1.09007 * 109.47126 * 180.02562 * 1 2 3 34 34 H 1.08999 * 109.46871 * 299.99621 * 1 2 3 35 35 H 1.08996 * 109.46873 * 299.99454 * 6 5 4 36 36 H 1.08995 * 109.47253 * 59.99521 * 6 5 4 37 37 H 0.97001 * 119.99371 * 359.97438 * 9 7 6 38 38 H 1.09006 * 109.46922 * 299.99968 * 12 10 9 39 39 H 1.09003 * 109.47221 * 59.99108 * 12 10 9 40 40 H 1.08997 * 109.47215 * 179.97438 * 13 12 10 41 41 H 1.09003 * 109.46762 * 59.99637 * 13 12 10 42 42 H 1.08995 * 109.47109 * 179.97438 * 17 16 14 43 43 H 1.09006 * 109.47105 * 180.02562 * 20 14 13 44 44 H 1.08997 * 109.47518 * 60.00085 * 20 14 13 45 45 H 1.08997 * 109.47080 * 300.00662 * 21 20 14 46 46 H 1.08997 * 109.47215 * 180.02562 * 21 20 14 47 47 H 1.07996 * 120.00263 * 179.77456 * 22 4 3 48 48 H 1.09001 * 109.47129 * 314.98153 * 28 27 23 49 49 H 0.96701 * 113.99512 * 180.02562 * 29 28 27 50 50 H 1.48498 * 110.00048 * 300.00053 * 30 28 27 51 51 H 1.48504 * 109.99937 * 61.31780 * 30 28 27 52 52 H 1.08002 * 119.99888 * 179.97438 * 31 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4359 1.2863 -0.0058 5 8 4.1795 0.1476 -0.0109 6 6 5.6003 0.3006 -0.0105 7 6 6.2518 -1.0583 -0.0159 8 8 5.5670 -2.0592 -0.0202 9 7 7.5957 -1.1613 -0.0171 10 6 8.2290 -2.4823 -0.0229 11 1 7.6274 -3.1763 0.5640 12 6 8.3354 -2.9906 -1.4620 13 6 8.9974 -4.3699 -1.4682 14 6 10.3972 -4.2665 -0.8590 15 1 10.9984 -3.5723 -1.4461 16 8 11.0153 -5.5549 -0.8642 17 6 11.7633 -5.8359 -2.0489 18 9 10.9152 -5.7804 -3.1602 19 9 12.7826 -4.8885 -2.1926 20 6 10.2908 -3.7582 0.5801 21 6 9.6288 -2.3789 0.5862 22 6 4.0603 2.5233 -0.0004 23 6 3.3029 3.6798 0.0053 24 7 3.9715 5.0002 0.0104 25 8 5.1876 5.0671 0.0100 26 8 3.3055 6.0200 0.0150 27 6 1.9224 3.6057 0.0052 28 6 1.1016 4.8695 0.0109 29 8 1.1349 5.4649 -1.2878 30 14 -0.6595 4.4643 0.4634 31 6 1.2932 2.3747 -0.0001 32 1 -0.3634 0.5138 -0.8899 33 1 -0.3634 -1.0277 0.0005 34 1 -0.3633 0.5138 0.8900 35 1 5.9063 0.8541 -0.8982 36 1 5.9067 0.8466 0.8817 37 1 8.1434 -0.3607 -0.0148 38 1 7.3382 -3.0638 -1.8962 39 1 8.9371 -2.2965 -2.0490 40 1 9.0728 -4.7322 -2.4934 41 1 8.3961 -5.0641 -0.8811 42 1 12.2009 -6.8314 -1.9747 43 1 11.2880 -3.6840 1.0139 44 1 9.6895 -4.4524 1.1671 45 1 10.2300 -1.6847 -0.0008 46 1 9.5534 -2.0166 1.6115 47 1 5.1386 2.5839 -0.0012 48 1 1.5131 5.5667 0.7408 49 1 0.6268 6.2847 -1.3577 50 1 -1.2320 3.5145 -0.5242 51 1 -0.7111 3.8737 1.8249 52 1 0.2146 2.3196 0.0003 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100670_4549636.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:10 Heat of formation + Delta-G solvation = -257.379758 kcal Electronic energy + Delta-G solvation = -43072.195688 eV Core-core repulsion = 36871.796233 eV Total energy + Delta-G solvation = -6200.399455 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 433.156 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -50.09817 -48.21189 -43.46975 -42.24128 -41.36376 -40.27621 -39.60688 -39.15526 -37.86338 -37.68549 -37.13611 -34.98155 -32.88172 -32.71334 -31.98308 -30.97068 -29.27419 -28.76396 -27.97880 -26.38740 -25.80187 -24.20968 -23.95861 -23.37699 -23.07224 -21.75763 -21.30524 -20.82160 -19.94657 -19.59876 -19.42033 -18.91270 -18.90350 -18.67426 -18.60221 -18.29331 -18.19855 -17.84443 -17.72938 -17.23185 -17.01899 -16.58092 -16.40662 -15.99457 -15.89843 -15.66333 -15.54291 -15.28705 -15.12650 -15.01315 -14.77856 -14.64486 -14.47753 -14.33428 -14.26277 -14.13498 -13.95540 -13.76339 -13.58657 -13.46552 -13.29733 -13.03453 -12.87987 -12.72902 -12.69042 -12.53615 -12.48151 -12.44977 -12.40761 -12.27225 -12.22458 -12.03588 -11.93002 -11.58034 -11.19193 -11.06882 -10.64478 -10.25933 -10.24901 -9.62912 -5.01727 -1.41183 -0.58508 0.09812 0.21975 1.13730 1.14211 1.33219 1.56324 1.69236 1.76025 1.79527 1.96693 2.26150 2.70494 2.80631 3.02367 3.18077 3.31550 3.40203 3.47332 3.49242 3.68781 3.71601 3.74678 3.78596 3.78964 3.87867 3.90867 3.92712 3.96143 3.98042 4.02000 4.05829 4.09300 4.11574 4.21318 4.24837 4.34025 4.47510 4.48932 4.56281 4.59296 4.64558 4.78290 4.94052 5.00614 5.02364 5.08507 5.16184 5.21886 5.32408 5.44019 5.57606 5.87906 6.34231 6.49105 6.83264 7.02807 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.004 3.996 2 O -0.305 6.305 3 C 0.163 3.837 4 C 0.104 3.896 5 O -0.290 6.290 6 C 0.025 3.975 7 C 0.517 3.483 8 O -0.565 6.565 9 N -0.704 5.704 10 C 0.146 3.854 11 H 0.071 0.929 12 C -0.122 4.122 13 C -0.138 4.138 14 C 0.075 3.925 15 H 0.078 0.922 16 O -0.389 6.389 17 C 0.398 3.602 18 F -0.220 7.220 19 F -0.218 7.218 20 C -0.109 4.109 21 C -0.114 4.114 22 C -0.106 4.106 23 C -0.043 4.043 24 N 0.037 4.963 25 O -0.192 6.192 26 O -0.140 6.140 27 C -0.004 4.004 28 C -0.100 4.100 29 O -0.553 6.553 30 Si 0.778 3.222 31 C -0.187 4.187 32 H 0.072 0.928 33 H 0.131 0.869 34 H 0.073 0.927 35 H 0.129 0.871 36 H 0.132 0.868 37 H 0.423 0.577 38 H 0.052 0.948 39 H 0.081 0.919 40 H 0.069 0.931 41 H 0.066 0.934 42 H 0.206 0.794 43 H 0.089 0.911 44 H 0.072 0.928 45 H 0.092 0.908 46 H 0.094 0.906 47 H 0.191 0.809 48 H 0.101 0.899 49 H 0.408 0.592 50 H -0.269 1.269 51 H -0.277 1.277 52 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.825 1.988 2.238 3.104 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.216 6.216 3 C 0.114 3.886 4 C 0.056 3.944 5 O -0.203 6.203 6 C -0.053 4.053 7 C 0.303 3.697 8 O -0.443 6.443 9 N -0.358 5.358 10 C 0.042 3.958 11 H 0.089 0.911 12 C -0.161 4.161 13 C -0.176 4.176 14 C 0.019 3.981 15 H 0.096 0.904 16 O -0.311 6.311 17 C 0.307 3.693 18 F -0.202 7.202 19 F -0.200 7.200 20 C -0.147 4.147 21 C -0.152 4.152 22 C -0.126 4.126 23 C -0.127 4.127 24 N 0.553 4.447 25 O -0.399 6.399 26 O -0.360 6.360 27 C -0.006 4.006 28 C -0.208 4.208 29 O -0.364 6.364 30 Si 0.679 3.321 31 C -0.206 4.206 32 H 0.091 0.909 33 H 0.149 0.851 34 H 0.091 0.909 35 H 0.146 0.854 36 H 0.150 0.850 37 H 0.261 0.739 38 H 0.071 0.929 39 H 0.100 0.900 40 H 0.088 0.912 41 H 0.085 0.915 42 H 0.222 0.778 43 H 0.108 0.892 44 H 0.091 0.909 45 H 0.111 0.889 46 H 0.113 0.887 47 H 0.208 0.792 48 H 0.119 0.881 49 H 0.260 0.740 50 H -0.195 1.195 51 H -0.203 1.203 52 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges -1.752 -1.013 2.452 3.179 hybrid contribution 0.882 0.793 -0.520 1.295 sum -0.869 -0.220 1.932 2.130 Atomic orbital electron populations 1.23673 0.75301 1.07119 1.02865 1.86310 1.24213 1.24621 1.86499 1.18667 0.89612 0.85985 0.94316 1.17875 0.88335 0.85503 1.02668 1.86303 1.18754 1.26576 1.88661 1.22975 0.78480 0.96328 1.07496 1.20293 0.83192 0.90310 0.75947 1.90786 1.63964 1.39773 1.49777 1.45717 1.05044 1.10421 1.74634 1.21033 0.94574 0.83960 0.96280 0.91108 1.21810 1.00729 0.96465 0.97055 1.22061 0.95900 0.97792 1.01894 1.22465 0.93028 0.83305 0.99328 0.90405 1.88441 1.66889 1.37406 1.38375 1.23846 0.76825 0.93966 0.74684 1.93042 1.73046 1.97363 1.56738 1.93044 1.61182 1.70295 1.95528 1.21520 1.02837 0.96587 0.93732 1.21733 0.93025 0.97242 1.03167 1.20970 1.03249 0.87918 1.00457 1.20536 0.92370 0.82787 1.17005 1.43440 1.00861 1.02974 0.97469 1.94521 0.96128 1.93934 1.55288 1.94480 1.64620 1.24820 1.52107 1.19324 0.90904 0.96150 0.94256 1.25230 1.11034 0.93326 0.91252 1.86386 1.77574 1.45186 1.27222 0.93533 0.75723 0.85888 0.76923 1.21051 1.01306 0.89537 1.08707 0.90927 0.85093 0.90868 0.85358 0.85020 0.73923 0.92911 0.90047 0.91194 0.91521 0.77778 0.89236 0.90915 0.88903 0.88712 0.79163 0.88100 0.73955 1.19533 1.20291 0.81409 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.30 -1.73 10.28 -79.53 -0.82 -2.54 16 3 C 0.16 0.82 6.70 22.57 0.15 0.97 16 4 C 0.10 0.44 6.70 22.57 0.15 0.59 16 5 O -0.29 -1.69 9.46 -67.11 -0.63 -2.33 16 6 C 0.02 -0.08 5.22 71.24 0.37 0.30 16 7 C 0.52 1.17 7.87 87.66 0.69 1.86 16 8 O -0.57 -7.78 16.16 16.02 0.26 -7.52 16 9 N -0.70 3.38 5.08 -442.54 -2.25 1.13 16 10 C 0.15 -0.33 2.45 44.99 0.11 -0.22 16 11 H 0.07 0.23 7.58 -2.39 -0.02 0.21 16 12 C -0.12 0.02 5.49 30.59 0.17 0.19 16 13 C -0.14 -0.15 5.39 30.60 0.16 0.01 16 14 C 0.08 -0.07 2.40 30.59 0.07 0.01 16 15 H 0.08 -0.11 7.20 -2.39 -0.02 -0.12 16 16 O -0.39 -0.29 10.29 -148.98 -1.53 -1.82 16 17 C 0.40 -0.77 6.26 113.37 0.71 -0.06 16 18 F -0.22 -0.52 15.46 44.97 0.70 0.18 16 19 F -0.22 -0.29 16.63 44.97 0.75 0.45 16 20 C -0.11 0.45 5.57 30.59 0.17 0.62 16 21 C -0.11 0.83 5.39 30.60 0.16 1.00 16 22 C -0.11 -0.20 8.54 22.35 0.19 -0.01 16 23 C -0.04 -0.25 6.85 36.38 0.25 0.00 16 24 N 0.04 0.33 4.45 -46.46 -0.21 0.12 16 25 O -0.19 -1.89 18.44 18.89 0.35 -1.54 16 26 O -0.14 -1.32 14.62 25.10 0.37 -0.95 16 27 C 0.00 -0.02 5.29 -19.86 -0.11 -0.12 16 28 C -0.10 0.00 1.73 71.24 0.12 0.12 16 29 O -0.55 -0.34 11.77 -129.61 -1.53 -1.86 16 30 Si 0.78 -3.95 30.19 68.60 2.07 -1.88 16 31 C -0.19 -0.53 7.65 22.35 0.17 -0.36 16 32 H 0.07 -0.33 7.66 -2.39 -0.02 -0.35 16 33 H 0.13 -0.80 8.14 -2.38 -0.02 -0.82 16 34 H 0.07 -0.39 7.66 -2.39 -0.02 -0.40 16 35 H 0.13 -1.15 7.66 -2.39 -0.02 -1.17 16 36 H 0.13 -1.28 7.66 -2.39 -0.02 -1.30 16 37 H 0.42 -5.27 8.60 -92.71 -0.80 -6.07 16 38 H 0.05 0.26 8.14 -2.38 -0.02 0.24 16 39 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 40 H 0.07 0.21 6.50 -2.39 -0.02 0.20 16 41 H 0.07 0.22 8.14 -2.39 -0.02 0.20 16 42 H 0.21 -2.10 8.14 -2.39 -0.02 -2.12 16 43 H 0.09 -0.48 8.14 -2.38 -0.02 -0.50 16 44 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 45 H 0.09 -0.96 8.14 -2.39 -0.02 -0.98 16 46 H 0.09 -0.87 8.14 -2.39 -0.02 -0.88 16 47 H 0.19 -0.77 5.85 -2.91 -0.02 -0.79 16 48 H 0.10 -0.04 6.07 -2.39 -0.01 -0.06 16 49 H 0.41 -3.87 8.74 -74.06 -0.65 -4.52 16 50 H -0.27 0.43 6.74 99.48 0.67 1.10 16 51 H -0.28 0.18 7.11 99.48 0.71 0.89 16 52 H 0.17 -0.09 3.13 -2.91 -0.01 -0.10 16 Total: 0.00 -32.13 433.62 1.79 -30.35 By element: Atomic # 1 Polarization: -17.37 SS G_CDS: -0.41 Total: -17.78 kcal Atomic # 6 Polarization: 1.33 SS G_CDS: 4.67 Total: 5.99 kcal Atomic # 7 Polarization: 3.71 SS G_CDS: -2.45 Total: 1.26 kcal Atomic # 8 Polarization: -15.04 SS G_CDS: -3.54 Total: -18.57 kcal Atomic # 9 Polarization: -0.81 SS G_CDS: 1.44 Total: 0.63 kcal Atomic # 14 Polarization: -3.95 SS G_CDS: 2.07 Total: -1.88 kcal Total: -32.13 1.79 -30.35 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_4549636.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -227.034 kcal (2) G-P(sol) polarization free energy of solvation -32.132 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -259.166 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.786 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.346 kcal (6) G-S(sol) free energy of system = (1) + (5) -257.380 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds