Wall clock time and date at job start Tue Mar 9 2021 12:54:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86298 * 109.47431 * 2 1 4 4 C 1.50698 * 109.47269 * 239.99701 * 2 1 3 5 5 C 1.34240 * 126.49992 * 105.01880 * 4 2 1 6 6 N 1.36827 * 109.93781 * 179.97438 * 5 4 2 7 7 C 1.46505 * 125.06207 * 179.97438 * 6 5 4 8 8 C 1.50703 * 109.47064 * 265.02774 * 7 6 5 9 9 O 1.21278 * 119.99985 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00161 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00271 * 180.02562 * 10 8 7 12 12 H 1.09001 * 109.47199 * 324.99664 * 11 10 8 13 13 C 1.52996 * 109.47084 * 84.99619 * 11 10 8 14 14 C 1.53002 * 109.47141 * 180.02562 * 13 11 10 15 15 C 1.53009 * 109.47090 * 300.00105 * 14 13 11 16 16 H 1.09001 * 109.46866 * 300.00109 * 15 14 13 17 17 O 1.42900 * 109.47167 * 180.02562 * 15 14 13 18 18 C 1.42893 * 114.00135 * 89.99814 * 17 15 14 19 19 F 1.39897 * 109.47162 * 299.99757 * 18 17 15 20 20 F 1.39903 * 109.46979 * 59.99794 * 18 17 15 21 21 C 1.52998 * 109.46882 * 59.99780 * 15 14 13 22 22 C 1.53002 * 109.47076 * 204.99915 * 11 10 8 23 23 C 1.37692 * 109.87874 * 0.23291 * 6 5 4 24 24 C 1.39083 * 133.51102 * 180.38844 * 23 6 5 25 25 C 1.37791 * 119.77735 * 179.64903 * 24 23 6 26 26 C 1.38788 * 120.66548 * 359.76183 * 25 24 23 27 27 C 1.36663 * 120.52738 * 359.97438 * 26 25 24 28 28 C 1.39592 * 119.76718 * 0.02562 * 27 26 25 29 29 H 0.96703 * 113.99600 * 299.99688 * 1 2 3 30 30 H 1.09007 * 109.47405 * 120.00277 * 2 1 3 31 31 H 1.48500 * 109.99946 * 178.67971 * 3 2 1 32 32 H 1.48498 * 109.99948 * 300.00026 * 3 2 1 33 33 H 1.07994 * 125.02957 * 359.97438 * 5 4 2 34 34 H 1.09002 * 109.47068 * 25.02742 * 7 6 5 35 35 H 1.09001 * 109.47372 * 145.02830 * 7 6 5 36 36 H 0.97005 * 119.99463 * 359.97438 * 10 8 7 37 37 H 1.09002 * 109.47281 * 299.99855 * 13 11 10 38 38 H 1.08999 * 109.47646 * 60.00441 * 13 11 10 39 39 H 1.09004 * 109.47634 * 180.02562 * 14 13 11 40 40 H 1.09001 * 109.47355 * 59.99915 * 14 13 11 41 41 H 1.09002 * 109.47347 * 179.97438 * 18 17 15 42 42 H 1.09002 * 109.46949 * 180.02562 * 21 15 14 43 43 H 1.08997 * 109.47585 * 60.00535 * 21 15 14 44 44 H 1.08997 * 109.46609 * 299.99518 * 22 11 10 45 45 H 1.09002 * 109.47469 * 59.99768 * 22 11 10 46 46 H 1.07999 * 120.11227 * 359.41704 * 24 23 6 47 47 H 1.07999 * 119.66904 * 179.73678 * 25 24 23 48 48 H 1.08005 * 119.73826 * 180.02562 * 26 25 24 49 49 H 1.08001 * 120.11603 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.4611 -0.1377 -2.3228 6 7 2.8036 -1.0991 -3.2341 7 6 3.4083 -0.8405 -4.5433 8 6 2.3286 -0.7841 -5.5931 9 8 1.1683 -0.9446 -5.2788 10 7 2.6524 -0.5563 -6.8814 11 6 1.6028 -0.5009 -7.9018 12 1 0.8161 -1.2132 -7.6529 13 6 1.0151 0.9108 -7.9527 14 6 -0.0816 0.9685 -9.0181 15 6 0.5135 0.6142 -10.3824 16 1 1.3001 1.3264 -10.6317 17 8 -0.5106 0.6687 -11.3775 18 6 -0.6569 1.9507 -11.9914 19 9 -0.9780 2.9009 -11.0162 20 9 0.5435 2.3091 -12.6143 21 6 1.1013 -0.7975 -10.3314 22 6 2.1985 -0.8550 -9.2659 23 6 2.4899 -2.3455 -2.7401 24 6 2.6294 -3.6362 -3.2390 25 6 2.2151 -4.7108 -2.4825 26 6 1.6633 -4.5194 -1.2235 27 6 1.5219 -3.2601 -0.7117 28 6 1.9349 -2.1571 -1.4609 29 1 -0.3933 0.4417 0.7651 30 1 1.7924 -0.5139 0.8900 31 1 3.5346 1.7701 0.0322 32 1 1.5615 2.4678 -1.2085 33 1 2.5970 0.9246 -2.4617 34 1 3.9393 0.1110 -4.5166 35 1 4.1082 -1.6405 -4.7846 36 1 3.5806 -0.4283 -7.1327 37 1 0.5907 1.1630 -6.9809 38 1 1.8017 1.6231 -8.2017 39 1 -0.5000 1.9743 -9.0547 40 1 -0.8682 0.2563 -8.7688 41 1 -1.4532 1.9090 -12.7346 42 1 1.5256 -1.0497 -11.3032 43 1 0.3148 -1.5097 -10.0821 44 1 2.9850 -0.1426 -9.5147 45 1 2.6172 -1.8607 -9.2296 46 1 3.0576 -3.7955 -4.2176 47 1 2.3204 -5.7121 -2.8734 48 1 1.3440 -5.3725 -0.6432 49 1 1.0913 -3.1188 0.2686 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100670_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:11 Heat of formation + Delta-G solvation = -158.509367 kcal Electronic energy + Delta-G solvation = -35359.522896 eV Core-core repulsion = 30309.913410 eV Total energy + Delta-G solvation = -5049.609486 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.158 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -50.12493 -48.23789 -42.65681 -41.21622 -39.94913 -38.17874 -37.85831 -37.53256 -35.01514 -34.23732 -32.02896 -31.68272 -30.43915 -30.30148 -28.70061 -26.46848 -25.69311 -24.08887 -23.91872 -23.41261 -22.60569 -21.71741 -21.29721 -20.62569 -19.45910 -18.93973 -18.70136 -18.50294 -18.37435 -18.27517 -17.82849 -17.20981 -16.54504 -16.53557 -16.34897 -15.86573 -15.68550 -15.56633 -15.36352 -15.10953 -14.99952 -14.91225 -14.82998 -14.66614 -14.54952 -14.47846 -14.29845 -14.19380 -13.79232 -13.64854 -13.51842 -13.40764 -13.33303 -12.88929 -12.77365 -12.65534 -12.53470 -12.50992 -12.32812 -12.07972 -12.05906 -11.81957 -11.62573 -11.28394 -11.14567 -10.64655 -10.27488 -10.18817 -9.26883 -8.74557 -4.97332 0.03137 0.56040 1.22908 1.32372 1.33198 1.56454 1.68676 1.90907 1.96989 2.09726 2.67575 2.87023 3.38669 3.44122 3.44839 3.49162 3.57929 3.65256 3.66981 3.75560 3.80120 3.88333 3.91469 3.96817 3.97096 3.99356 4.07136 4.17117 4.20257 4.21967 4.28544 4.33602 4.43652 4.50884 4.59643 4.60538 4.70062 4.73820 4.82721 4.88061 4.95524 4.97914 5.05346 5.06324 5.11786 5.31914 5.43381 5.53967 5.57641 5.64425 5.65261 6.03420 6.14546 6.36431 6.98120 7.03467 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.571 6.571 2 C -0.051 4.051 3 Si 0.788 3.212 4 C -0.180 4.180 5 C 0.052 3.948 6 N -0.467 5.467 7 C 0.086 3.914 8 C 0.491 3.509 9 O -0.571 6.571 10 N -0.706 5.706 11 C 0.146 3.854 12 H 0.064 0.936 13 C -0.119 4.119 14 C -0.138 4.138 15 C 0.077 3.923 16 H 0.079 0.921 17 O -0.389 6.389 18 C 0.398 3.602 19 F -0.220 7.220 20 F -0.218 7.218 21 C -0.109 4.109 22 C -0.112 4.112 23 C 0.090 3.910 24 C -0.136 4.136 25 C -0.102 4.102 26 C -0.151 4.151 27 C -0.082 4.082 28 C -0.120 4.120 29 H 0.398 0.602 30 H 0.080 0.920 31 H -0.281 1.281 32 H -0.296 1.296 33 H 0.174 0.826 34 H 0.155 0.845 35 H 0.150 0.850 36 H 0.422 0.578 37 H 0.046 0.954 38 H 0.082 0.918 39 H 0.069 0.931 40 H 0.062 0.938 41 H 0.207 0.793 42 H 0.090 0.910 43 H 0.070 0.930 44 H 0.093 0.907 45 H 0.094 0.906 46 H 0.134 0.866 47 H 0.151 0.849 48 H 0.144 0.856 49 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.826 1.177 -1.665 6.172 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.380 6.380 2 C -0.160 4.160 3 Si 0.692 3.308 4 C -0.188 4.188 5 C -0.074 4.074 6 N -0.150 5.150 7 C -0.038 4.038 8 C 0.276 3.724 9 O -0.449 6.449 10 N -0.359 5.359 11 C 0.041 3.959 12 H 0.082 0.918 13 C -0.158 4.158 14 C -0.177 4.177 15 C 0.020 3.980 16 H 0.097 0.903 17 O -0.311 6.311 18 C 0.307 3.693 19 F -0.202 7.202 20 F -0.200 7.200 21 C -0.147 4.147 22 C -0.150 4.150 23 C -0.015 4.015 24 C -0.157 4.157 25 C -0.121 4.121 26 C -0.170 4.170 27 C -0.101 4.101 28 C -0.124 4.124 29 H 0.249 0.751 30 H 0.098 0.902 31 H -0.208 1.208 32 H -0.223 1.223 33 H 0.191 0.809 34 H 0.173 0.827 35 H 0.168 0.832 36 H 0.260 0.740 37 H 0.065 0.935 38 H 0.100 0.900 39 H 0.088 0.912 40 H 0.081 0.919 41 H 0.223 0.777 42 H 0.109 0.891 43 H 0.088 0.912 44 H 0.112 0.888 45 H 0.112 0.888 46 H 0.152 0.848 47 H 0.168 0.832 48 H 0.162 0.838 49 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 5.642 1.288 -2.741 6.403 hybrid contribution 0.119 0.012 -0.239 0.268 sum 5.761 1.300 -2.980 6.615 Atomic orbital electron populations 1.86515 1.18191 1.82402 1.50918 1.24333 0.85060 1.11054 0.95599 0.94142 0.77461 0.74045 0.85130 1.20053 1.09077 0.91961 0.97673 1.21700 1.02016 0.94258 0.89392 1.43375 1.53455 1.03910 1.14263 1.21996 0.94016 1.08938 0.78846 1.21420 0.90368 0.76019 0.84600 1.90817 1.22376 1.50040 1.81625 1.45838 1.11863 1.72352 1.05842 1.20974 0.90305 0.96555 0.88056 0.91808 1.21780 0.98416 0.97517 0.98099 1.22061 0.98686 1.02608 0.94295 1.22447 0.89077 1.00016 0.86453 0.90273 1.88441 1.57599 1.30302 1.54763 1.23851 0.85423 0.75283 0.84760 1.93040 1.92810 1.67454 1.66901 1.93044 1.51995 1.92177 1.82772 1.21531 0.98458 0.94075 1.00631 1.21729 0.98075 1.04401 0.90787 1.18491 1.01785 0.86912 0.94309 1.20271 1.05349 0.88804 1.01237 1.21201 0.97605 0.99018 0.94272 1.20986 1.02015 0.97082 0.96931 1.20500 0.98457 0.91337 0.99769 1.19362 1.04357 0.93483 0.95216 0.75126 0.90195 1.20774 1.22329 0.80936 0.82742 0.83194 0.74001 0.93488 0.89957 0.91208 0.91875 0.77736 0.89096 0.91162 0.88809 0.88772 0.84772 0.83171 0.83817 0.85424 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -3.74 12.86 -148.98 -1.92 -5.65 16 2 C -0.05 -0.26 3.05 71.24 0.22 -0.04 16 3 Si 0.79 -0.01 30.79 68.60 2.11 2.10 16 4 C -0.18 -2.06 5.61 -18.63 -0.10 -2.17 16 5 C 0.05 0.48 9.89 83.00 0.82 1.30 16 6 N -0.47 -3.38 2.27 -519.98 -1.18 -4.57 16 7 C 0.09 -0.23 6.48 85.63 0.56 0.32 16 8 C 0.49 1.38 7.86 87.66 0.69 2.07 16 9 O -0.57 -8.77 16.08 -3.02 -0.05 -8.82 16 10 N -0.71 3.12 5.08 -442.54 -2.25 0.88 16 11 C 0.15 -0.19 2.45 44.99 0.11 -0.08 16 12 H 0.06 0.34 7.58 -2.39 -0.02 0.32 16 13 C -0.12 -0.12 5.49 30.59 0.17 0.05 16 14 C -0.14 -0.31 5.39 30.60 0.17 -0.15 16 15 C 0.08 -0.02 2.40 30.60 0.07 0.05 16 16 H 0.08 -0.09 7.20 -2.39 -0.02 -0.10 16 17 O -0.39 -0.49 10.29 -148.98 -1.53 -2.03 16 18 C 0.40 -0.64 6.26 113.37 0.71 0.07 16 19 F -0.22 -0.61 15.46 44.97 0.70 0.09 16 20 F -0.22 -0.31 16.63 44.97 0.75 0.44 16 21 C -0.11 0.38 5.58 30.61 0.17 0.55 16 22 C -0.11 0.77 5.40 30.61 0.17 0.93 16 23 C 0.09 0.99 6.80 39.03 0.27 1.26 16 24 C -0.14 -0.99 10.00 22.37 0.22 -0.77 16 25 C -0.10 -0.58 10.01 22.30 0.22 -0.36 16 26 C -0.15 -1.05 9.97 22.03 0.22 -0.83 16 27 C -0.08 -0.86 10.05 22.23 0.22 -0.64 16 28 C -0.12 -1.60 6.35 -20.20 -0.13 -1.73 16 29 H 0.40 -2.04 8.74 -74.06 -0.65 -2.69 16 30 H 0.08 0.15 7.96 -2.38 -0.02 0.13 16 31 H -0.28 -1.10 7.11 99.48 0.71 -0.39 16 32 H -0.30 -1.96 7.04 99.48 0.70 -1.26 16 33 H 0.17 0.89 6.30 -2.91 -0.02 0.88 16 34 H 0.16 -1.53 8.12 -2.39 -0.02 -1.55 16 35 H 0.15 -1.37 8.14 -2.39 -0.02 -1.39 16 36 H 0.42 -5.28 8.60 -92.70 -0.80 -6.08 16 37 H 0.05 0.32 8.14 -2.39 -0.02 0.30 16 38 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 39 H 0.07 0.29 6.50 -2.38 -0.02 0.27 16 40 H 0.06 0.32 8.14 -2.39 -0.02 0.30 16 41 H 0.21 -2.04 8.14 -2.39 -0.02 -2.06 16 42 H 0.09 -0.46 8.14 -2.39 -0.02 -0.47 16 43 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 44 H 0.09 -0.96 8.14 -2.39 -0.02 -0.98 16 45 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 46 H 0.13 0.28 8.06 -2.91 -0.02 0.26 16 47 H 0.15 -0.03 8.06 -2.91 -0.02 -0.05 16 48 H 0.14 0.25 8.06 -2.91 -0.02 0.23 16 49 H 0.13 0.99 8.06 -2.91 -0.02 0.96 16 Total: 0.00 -33.22 409.16 0.98 -32.23 By element: Atomic # 1 Polarization: -14.11 SS G_CDS: -0.41 Total: -14.52 kcal Atomic # 6 Polarization: -4.92 SS G_CDS: 4.77 Total: -0.15 kcal Atomic # 7 Polarization: -0.26 SS G_CDS: -3.43 Total: -3.69 kcal Atomic # 8 Polarization: -13.00 SS G_CDS: -3.50 Total: -16.50 kcal Atomic # 9 Polarization: -0.92 SS G_CDS: 1.44 Total: 0.53 kcal Atomic # 14 Polarization: -0.01 SS G_CDS: 2.11 Total: 2.10 kcal Total: -33.22 0.98 -32.23 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.278 kcal (2) G-P(sol) polarization free energy of solvation -33.216 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -159.494 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.985 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.232 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.509 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds